Clone GH14710 Report

Search the DGRC for GH14710

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:147
Well:10
Vector:pOT2
Associated Gene/TranscriptCG42542-RB
Protein status:GH14710.pep: gold
Preliminary Size:1615
Sequenced Size:1649

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG4196 2001-01-01 Release 2 assignment
CG4196 2001-09-19 Blastp of sequenced clone
CG4196 2003-01-01 Sim4 clustering to Release 3
CG4196 2008-04-29 Release 5.5 accounting
CG4196 2008-08-15 Release 5.9 accounting
CG4196 2008-12-18 5.12 accounting

Clone Sequence Records

GH14710.complete Sequence

1649 bp (1649 high quality bases) assembled on 2001-09-19

GenBank Submission: AY058385

> GH14710.complete
CGATATTCAGTCGAGGGCAACGGACACGTACACGTTTAAAGTTTAGAGGA
ACAAGGAGATTTGCATGCGGCGCGAATAAAGGAGCGATAGTTCCTAACCA
CAGACAGCGAAGATGTCACAAAACCAATCCTACTTCTGGCAAACGACCAG
ACACAATGTATACCTGAAGCGCTCGGCCAAATGGCACATGGCGCTGGCCC
TGATGGTGGTGCTCACATTCGGCACAATTTGTGCGGCGGAAGCTCAACCG
GATAGTGCGGACAATGCGGTCATTGAATCCGGAATACAGAGCAACTTGGA
CGTGCAGGGAGATTTGAATAGGCCAACGGATCTGAGTTCTTTAGCGGAGA
AACCAAAAGATGCTGCGGACCGGCCGAAAACGAAGGGCACCTTTATCGAT
GCGTTTACCGCATCGATCTCTGTTATCTTACTAACAGAGCTAGGGGATAA
GACTTTCTTTATCGCTGCCATAATGGCCATGCGCCATCCGCGTTTGATTG
TCTTTGGCGGTGCCATCGCCGCCTTGGCGCTAATGACGGTACTCTCATGC
GCATTTGGCATGGCAGCGAACTTTATTCCTAAGATTTATACGTATTATAT
CTCAACTGCATTATTTTTAATATTTGGTTTAAAAATGCTGTACGACGGCT
ACAAAATGAAACCAACCGACGCTCAGGAAGAACTGGAAGAGGTGCAAACT
GATCTGCGCAAGCGCGAGGATGAGCTGGATCGTGATGTGAACGCGGCGCT
GGTGAATGACGCCGAGAGCGGTCGTCGTCGTCCACAGAAACGGGGTGCCA
CCTACTTCACCATGCGCATCCTGGCCCAGGCCTTCACAATGACGTTCCTG
GCCGAGTGGGGCGATCGCTCCCAACTGACCACCATTATTCTCGCCGCTAG
CAAGGACGTTTACGGCGTTATCGCTGGCGGTATTATTGGCCACTGCATCT
GCACCGGCCTGGCTGTGATTGGTGGTCGTCTCGTGGCTTCCAAAATCTCA
GTGCGCACTGTCACCATTGTGGGTGGCATTGTGTTCATCGGATTCGCCAT
CTACGCTGTCGCCATACCTCCGGATGACATTTAGGCGAAGCCTTTATACT
CCAATCGAGATTGCCCGCTGACGACCCCACAATATTATGAAGATTTAGTT
TTAGTTACTACCTGATAAACCCCACTTTTCTTCGAGGAGCATCAGGCAAG
GATCGTGTTGAACTAGTTTAAAACTAGAAATGCGTTGATGTTTTTAACGT
AGCTTTCTTCTTGCCAAACATCCAAAACAAAAGTGCCTTCAGTGCTTTCC
GCTTCGGCCATGACATACATTTTTAGTTCACACAATTAATTCTTTTGTTT
TCCAATTGTCTAGTATCGCTTTAATTTGTTTGTTTAGTTTCGGTTTCGTG
TTAAGTATTAAAGATGATTGTACATACGCGTGTAGAGCCATCGCGATGCC
CACGCTCCTCTGAGTTGTATCCTTTCCTTCATAACGCAGATCCTTATTCG
CATATTTGTTTACGTAGCCGTGTTTACTTAATGGAAACAACCAAAATGAA
ACTTTGTAGATTTGATTATTTATGCGAATTTTGTATGAAAAACTAATTAA
ATTGAGCAAAACAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

GH14710.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:22:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG42542-RB 1807 CG42542-RB 95..1711 1..1617 8085 100 Plus
CG42542-RF 2011 CG42542-RF 304..1915 6..1617 8060 100 Plus
CG42542-RE 2276 CG42542-RE 1358..2251 724..1617 4470 100 Plus
CG42542-RE 2276 CG42542-RE 95..818 1..724 3620 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 00:28:26
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 11026895..11027608 903..1616 3540 99.7 Plus
chr3R 27901430 chr3R 11023845..11024135 293..583 1455 100 Plus
chr3R 27901430 chr3R 11023496..11023781 7..292 1430 100 Plus
chr3R 27901430 chr3R 11026653..11026835 723..905 915 100 Plus
chr3R 27901430 chr3R 11024199..11024341 582..724 715 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:52:45 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 00:28:24
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 15202264..15202978 903..1617 3575 100 Plus
3R 32079331 3R 15199214..15199504 293..583 1455 100 Plus
3R 32079331 3R 15198865..15199150 7..292 1430 100 Plus
3R 32079331 3R 15202022..15202204 723..905 915 100 Plus
3R 32079331 3R 15199568..15199710 582..724 715 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:45:28
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 14943095..14943809 903..1617 3575 100 Plus
3R 31820162 3R 14940045..14940335 293..583 1455 100 Plus
3R 31820162 3R 14939696..14939981 7..292 1430 100 Plus
3R 31820162 3R 14942853..14943035 723..905 915 100 Plus
3R 31820162 3R 14940399..14940541 582..724 715 100 Plus
Blast to na_te.dros performed 2019-03-16 00:28:25
Subject Length Description Subject Range Query Range Score Percent Strand
TART-A 13424 TART-A 13424bp 8115..8199 1377..1294 126 64.4 Minus
hobo 2959 hobo DMHFL1 2959bp Derived from M69216 (g157606) (Rel. 41, Last updated, Version 3). 2313..2384 1355..1425 123 65.3 Plus
G7 1192 G7 G7 1192bp 1117..1190 1381..1310 122 64.9 Minus

GH14710.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 00:29:24 Download gff for GH14710.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 11023491..11023781 1..292 98 -> Plus
chr3R 11023845..11024135 293..583 100 -> Plus
chr3R 11024201..11024341 584..724 100 -> Plus
chr3R 11026655..11026834 725..904 100 -> Plus
chr3R 11026897..11027608 905..1616 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:43:26 Download gff for GH14710.complete
Subject Subject Range Query Range Percent Splice Strand
CG4196-RB 1..972 113..1084 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:07:13 Download gff for GH14710.complete
Subject Subject Range Query Range Percent Splice Strand
CG42542-RB 1..972 113..1084 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:12:24 Download gff for GH14710.complete
Subject Subject Range Query Range Percent Splice Strand
CG42542-RB 1..972 113..1084 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:38:01 Download gff for GH14710.complete
Subject Subject Range Query Range Percent Splice Strand
CG4196-RB 1..972 113..1084 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 04:02:17 Download gff for GH14710.complete
Subject Subject Range Query Range Percent Splice Strand
CG42542-RB 1..972 113..1084 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:57:14 Download gff for GH14710.complete
Subject Subject Range Query Range Percent Splice Strand
CG4196-RC 21..1636 1..1616 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:07:13 Download gff for GH14710.complete
Subject Subject Range Query Range Percent Splice Strand
CG42542-RB 23..1638 1..1616 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:12:24 Download gff for GH14710.complete
Subject Subject Range Query Range Percent Splice Strand
CG42542-RB 35..1650 1..1616 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:38:01 Download gff for GH14710.complete
Subject Subject Range Query Range Percent Splice Strand
CG4196-RC 21..1636 1..1616 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 04:02:17 Download gff for GH14710.complete
Subject Subject Range Query Range Percent Splice Strand
CG42542-RB 35..1650 1..1616 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:29:24 Download gff for GH14710.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15198860..15199150 1..292 98 -> Plus
3R 15199214..15199504 293..583 100 -> Plus
3R 15199570..15199710 584..724 100 -> Plus
3R 15202024..15202203 725..904 100 -> Plus
3R 15202266..15202977 905..1616 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:29:24 Download gff for GH14710.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15198860..15199150 1..292 98 -> Plus
3R 15199214..15199504 293..583 100 -> Plus
3R 15199570..15199710 584..724 100 -> Plus
3R 15202024..15202203 725..904 100 -> Plus
3R 15202266..15202977 905..1616 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:29:24 Download gff for GH14710.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15198860..15199150 1..292 98 -> Plus
3R 15199214..15199504 293..583 100 -> Plus
3R 15199570..15199710 584..724 100 -> Plus
3R 15202024..15202203 725..904 100 -> Plus
3R 15202266..15202977 905..1616 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:12:24 Download gff for GH14710.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 11027746..11027925 725..904 100 -> Plus
arm_3R 11025292..11025432 584..724 100 -> Plus
arm_3R 11024582..11024872 1..292 98 -> Plus
arm_3R 11024936..11025226 293..583 100 -> Plus
arm_3R 11027988..11028699 905..1616 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:15:14 Download gff for GH14710.complete
Subject Subject Range Query Range Percent Splice Strand
3R 14939691..14939981 1..292 98 -> Plus
3R 14940045..14940335 293..583 100 -> Plus
3R 14940401..14940541 584..724 100 -> Plus
3R 14942855..14943034 725..904 100 -> Plus
3R 14943097..14943808 905..1616 100   Plus

GH14710.hyp Sequence

Translation from 112 to 1083

> GH14710.hyp
MSQNQSYFWQTTRHNVYLKRSAKWHMALALMVVLTFGTICAAEAQPDSAD
NAVIESGIQSNLDVQGDLNRPTDLSSLAEKPKDAADRPKTKGTFIDAFTA
SISVILLTELGDKTFFIAAIMAMRHPRLIVFGGAIAALALMTVLSCAFGM
AANFIPKIYTYYISTALFLIFGLKMLYDGYKMKPTDAQEELEEVQTDLRK
REDELDRDVNAALVNDAESGRRRPQKRGATYFTMRILAQAFTMTFLAEWG
DRSQLTTIILAASKDVYGVIAGGIIGHCICTGLAVIGGRLVASKISVRTV
TIVGGIVFIGFAIYAVAIPPDDI*

GH14710.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 07:56:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG42542-PF 323 CG42542-PF 1..323 1..323 1633 100 Plus
CG42542-PC 323 CG4196-PB 1..323 1..323 1633 100 Plus
CG42542-PB 323 CG4196-PC 1..323 1..323 1633 100 Plus
CG42542-PD 503 CG42542-PD 1..221 1..222 1046 94.6 Plus
CG42542-PE 503 CG42542-PE 1..221 1..222 1046 94.6 Plus
CG42542-PD 503 CG42542-PD 385..503 205..323 597 100 Plus

GH14710.pep Sequence

Translation from 112 to 1083

> GH14710.pep
MSQNQSYFWQTTRHNVYLKRSAKWHMALALMVVLTFGTICAAEAQPDSAD
NAVIESGIQSNLDVQGDLNRPTDLSSLAEKPKDAADRPKTKGTFIDAFTA
SISVILLTELGDKTFFIAAIMAMRHPRLIVFGGAIAALALMTVLSCAFGM
AANFIPKIYTYYISTALFLIFGLKMLYDGYKMKPTDAQEELEEVQTDLRK
REDELDRDVNAALVNDAESGRRRPQKRGATYFTMRILAQAFTMTFLAEWG
DRSQLTTIILAASKDVYGVIAGGIIGHCICTGLAVIGGRLVASKISVRTV
TIVGGIVFIGFAIYAVAIPPDDI*

GH14710.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 11:57:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17836-PA 510 GF17836-PA 1..208 1..207 1022 92.3 Plus
Dana\GF17836-PA 510 GF17836-PA 392..510 205..323 603 91.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 11:57:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG16892-PA 510 GG16892-PA 1..221 1..222 1074 91.4 Plus
Dere\GG16892-PA 510 GG16892-PA 392..510 205..323 622 97.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 11:57:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18975-PA 507 GH18975-PA 1..207 1..207 838 77.3 Plus
Dgri\GH18975-PA 507 GH18975-PA 388..507 205..323 526 89.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:56:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG42542-PF 323 CG42542-PF 1..323 1..323 1633 100 Plus
CG42542-PC 323 CG4196-PB 1..323 1..323 1633 100 Plus
CG42542-PB 323 CG4196-PC 1..323 1..323 1633 100 Plus
CG42542-PD 503 CG42542-PD 1..221 1..222 1046 94.6 Plus
CG42542-PE 503 CG42542-PE 1..221 1..222 1046 94.6 Plus
CG42542-PD 503 CG42542-PD 385..503 205..323 597 100 Plus
CG42542-PE 503 CG42542-PE 385..503 205..323 597 100 Plus
CG42542-PG 313 CG42542-PG 195..313 205..323 597 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 11:57:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI24136-PA 512 GI24136-PA 1..209 1..207 849 78.9 Plus
Dmoj\GI24136-PA 512 GI24136-PA 369..509 184..323 576 79.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 11:57:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL22139-PA 518 GL22139-PA 1..223 1..222 900 79.6 Plus
Dper\GL22139-PA 518 GL22139-PA 399..518 205..323 576 92.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 11:57:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA27390-PB 326 GA27390-PB 1..326 1..323 1461 87.2 Plus
Dpse\GA27390-PA 518 GA27390-PA 1..223 1..222 900 79.6 Plus
Dpse\GA27390-PA 518 GA27390-PA 367..518 184..323 579 76.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 11:57:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24201-PA 503 GM24201-PA 1..221 1..222 1107 94.1 Plus
Dsec\GM24201-PA 503 GM24201-PA 385..503 205..323 630 100 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 11:57:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18991-PA 503 GD18991-PA 1..221 1..222 1108 94.6 Plus
Dsim\GD18991-PA 503 GD18991-PA 385..503 205..323 629 100 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 11:57:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ10960-PA 505 GJ10960-PA 1..229 1..228 892 74.7 Plus
Dvir\GJ10960-PA 505 GJ10960-PA 386..505 205..323 571 90 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 11:57:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13301-PA 527 GK13301-PA 1..220 1..222 877 76.1 Plus
Dwil\GK13301-PA 527 GK13301-PA 406..524 205..323 615 95 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 11:57:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24274-PA 504 GE24274-PA 1..221 1..222 1084 91.9 Plus
Dyak\GE24274-PA 504 GE24274-PA 365..504 184..323 631 85.7 Plus