Clone GH14769 Report

Search the DGRC for GH14769

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:147
Well:69
Vector:pOT2
Associated Gene/Transcriptpar-1-RQ
Protein status:GH14769.pep: gold
Preliminary Size:3050
Sequenced Size:3308

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG8201 2002-06-18 Blastp of sequenced clone
par-1 2008-04-29 Release 5.5 accounting
par-1 2008-08-15 Release 5.9 accounting
par-1 2008-12-18 5.12 accounting

Clone Sequence Records

GH14769.complete Sequence

3308 bp (3308 high quality bases) assembled on 2002-06-18

GenBank Submission: AY128423

> GH14769.complete
CCGTCGTCGCGCTGTTTTCTGTTGTCATTAACCGTCGCTCTCCGCCGATA
TCGTTGCTATATCGCCTAGCCTGTATCGTTATCGCCCCGCGATGAGTTGA
CTCCCCTGGTATTCTTGTTGTTATTTTTGTTACTTTCAATTTATAATTTG
CCGTTTGCCATTGTGACCAGTTATTATCGCACAAGCACAAGGGCGTTACG
TCAAACAATACAAAACGCGAAAAATAAAGAAAAAAACAACAGAAAATTTA
ACAAGATGGTCTTTTCGAAATAAAAGCGACAAAGCTGCGCCTGAATTGTG
ATTGTTGTGCCACAAAATACACAAAACGAACAAAATTTATTCATACTTTT
ATGCACACGTATACGCGCGCATCTCTCAATGTTTACACACGAAATTCGCT
GTGATAATTGCCAAAGCGAAGAACGAGGGAATATGTGTCTCAGTTTCGTT
GCAACTGGGCCAATAATCCGTATACCGTGAACACCGAGTCGCGTCGAGAA
CGAAGAAATACCACCGCAACCCAACCACGAAACAACCAAGTGAACCACCC
ACCGCAAAACCACCAAAGCACCTACCATGGGCCAGACTTCCAGTCACCGG
CAGATGCACCACAGTAGCAATAACAACAACAAGGAGGAACCACCACAACC
GGCTTCACAGTTTGGAAATCGTCGAACCTCTACCCGCAAATCGACTTCGT
CTTCGAAACATTACCCCACATTGGTGCAACCATTGCGTAAGGATGAGCTC
TCTCTCCTGCGAGATTCACTTCTGCGCAATGGAAGCATTATGCGCAAGAA
CCCGGAACGTCGTCCGGTAACGATCAGTGAGCTGAAACCAGTTAATACCG
GGCAGGGGACTTCGGGTAGTGTCCTGCCTATTACAGCAGAGGATGCTGCT
GGTGGGAGCAGTAGTAGCATCACCCAACTAATGGCCTTCCAACTGCCCGT
GGATCGAAGTGCCAAGACTGACGACCTGGCTGCCGAATCCTCGGCTTCAG
CAGCAGCAGCTGTGGCGCCCAAGGAGGGGCGCAATGAGTTTTATATTGTG
GGAGATGGCTATCATCGGACGGATCACTGCTACTATCGCAGTCCCAATGG
CGATTTTCACAAACTGCCATCCGACTCCTTTCACAAGATGTCGGAGGGCT
GTTTCGTCCGAATGGCCGATGGGGTCTTCCGTCGCCTGGAGGTACCCACC
AAGGCTCAAATATCCCGAAGATCCAGCAGGGCAGAGGAAATAGGCGATGC
CACAAGCCAGGGAAATGGAAGTGCCGCCACCAATGTTAAGAGCCAACTGA
TGAGATTTCTAAAGCGCTCCAAGAGCCACACGCCCGCCACTATTGCCAAG
TTGCAGCGGGAAAAGGAGGAGGCCCGAGCGGAACGCAAGCAACGGCTATC
GAACGCCCTGCGGCAGAAGAATCTAGCGGCCACAAATGCAGCCTCAGCTG
CGGCGGCGAACTCATCCTACGCAAGCGGTGGTGGTGGTGGCACCGTAAGC
AGTCGGAACAATAAGATTGTGGTGACAATGATCGAAAACGGCGGCTTGCC
CATTGTGGCCACCAGTAAGGCGGAAAGGCCCAAGGCCAAGGAGTCGGCAT
CATCCAGTGACAAGGCTCGCAACTCGAGGATTTTTGTTACCCCACATTGA
ATTCCTATAATCCATATGGAAACTAATATATATTTTCAGTCTAATCGCAC
AAGTGCTACATAAAAACCCAACGCAAATACGTTTAAAGATTAGGGGATTA
TAGGGATTACGGGCTCTCTGTTTCTATAACTATACGATTGCATTGTCCGG
AGGACAAGTTCATAATAGTTGACCTCATTAGATTTTCCTGTTAGCTAGCA
TGCGAAAAATGAAATTCTATCTTTAATGTTTTTGTTTGGGACCTGAAAGG
CTTGACTGAAATCTCGCTGTCTTGTCTTAATGTAGATTAAGCTGCAAGTT
ATTCAATTAGCTTAATTAATACGGACACTTTATACAGGCTCAGCTACTTG
ATACCTCGTATGAATAAATTAAAACCAAACTTGGCGAGTTACAAATTGAC
AGAATGATCGAATTTCATATGAGACACTTTTTGATATCTTAAAATGAGAG
TTTCTCTATTTTCCAGATTATTTATTTTTAAGTATACCTAATGTGTTTCG
TTTATGTCGTATCACTCGTGTCTCTATATATTTTATTCACAAATTTTATT
GTGTCGGCTGACAAATGACTTACAATTATTTGACGACAAGATGTTCATAA
TAATGTTCTTTCGGGATTGCATTTTTAGTACCAAACTGTGTGTATTCCTC
GGTCTTTGTATTCTGGTGATTGATATAGAGTAAAACAGGGGAACGGGGGA
AGTTGATTAGTGAAATCTTCGCGACGACCGTAGAATTCCGACTCAGACTT
CAGACATCATGTCCTTTTGGTTTTATTACTTAGAACTCTTACGTAATGCA
TCACCTAATCAACTGATTAACTTTAAAGGAAGCAGTTGAACTTATTGGGT
AATTGATTGATTTTAATAGAAAACCAAAGTCCAACCGAATGTTACTTTAA
TCGCAGTAAATCAGGGAAGAAGCGCTTTGCGTAACTTGGTGGAACTTATA
TATTGCGCACATGCGCAGAACACTAAACCCTGCAGCAAACACGGCTAACA
GTTTCTTTCCCAGCGTTACGCTCAGTGGTACTCGCACACTCATACACTCT
CAAAACTTTCGAGCTCCAAACGGGGCTTCTCTTTGTGGGAGAACAAGTAC
ACAGATGCAGATACGGATAGAGATACTGTATTAATGGTAGTAGTGCTCCA
CCAGTGGAGAGAGCTGCCCACTGATCGTGTGCTTGTGCTGGTGTGTTGGT
GTATTAAGGCCGACGCCGCTGCCGCAGTCGACGTCGCTGCTCGAAGCGAT
TCCGTGCTTTTGGAATACTCCGCGCTCTCGCTCTCCGGCACTCCAGTTCC
AGTTGCTGAGTGGCCAAGTGGCTCTTTGGCTGCTGAGCCCTGTTTAGCTT
TGTTTTTCGGTGTCTTCTGTGTTTTGCTGTTTTTTGTTGGTGTAAATCGT
ATAGTTGTAGTCGTAGCCTGTCGACGACGTTTACGTCAGAGTTGCAGAGG
AGGAGCTATAATTTAGTACGAATACCCAAACCCCCACGTAAAATGAGTGC
GAAAAATTGCGAAAGCCGCGTGCCTCTGCGATAAGATAACCGTGTGTGGT
TAAAGAACTCCTCCGGCCAACGAAACGAACCTTTTAATAATCGGGATTTG
CGCGAAATGTGATTTTTTATAGTCCACAGACCAAGTGAAAAAAAAAAAAA
AAAAAAAA

GH14769.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:45:37
Subject Length Description Subject Range Query Range Score Percent Strand
par-1-RQ 3287 par-1-RQ 1..3287 1..3287 16435 100 Plus
nc_8037.a 739 nc_8037.a 110..739 276..905 3150 100 Plus
nc_8037.b 600 nc_8037.b 258..600 277..619 1715 100 Plus
nc_8037.b 600 nc_8037.b 14..257 1..244 1220 100 Plus
nc_8037.a 739 nc_8037.a 3..110 1..108 540 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 06:03:34
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 15353315..15354973 1629..3287 8280 99.9 Plus
chr2R 21145070 chr2R 15351470..15352854 245..1629 6925 100 Plus
chr2R 21145070 chr2R 15349697..15349940 1..244 1205 99.6 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:52:57 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 06:03:32
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 19466155..19467831 1629..3305 8355 99.9 Plus
2R 25286936 2R 19464310..19465694 245..1629 6925 100 Plus
2R 25286936 2R 19462536..19462779 1..244 1220 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:18:42
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 19467354..19469030 1629..3305 8355 99.8 Plus
2R 25260384 2R 19465509..19466893 245..1629 6925 100 Plus
2R 25260384 2R 19463735..19463978 1..244 1220 100 Plus
Blast to na_te.dros performed 2019-03-16 06:03:32
Subject Length Description Subject Range Query Range Score Percent Strand
McClintock 6450 McClintock McCLINTOCK 6450bp 5635..5860 2339..2110 159 57.8 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2277..2429 479..632 128 57.3 Plus
ZAM 8435 ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). 2633..2678 608..651 117 76.1 Plus

GH14769.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 06:04:24 Download gff for GH14769.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 15349697..15349940 1..244 99 -> Plus
chr2R 15351470..15352854 245..1629 100 -> Plus
chr2R 15353316..15354973 1630..3287 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:43:36 Download gff for GH14769.complete
Subject Subject Range Query Range Percent Splice Strand
par-1-RQ 1..1074 577..1650 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:19:52 Download gff for GH14769.complete
Subject Subject Range Query Range Percent Splice Strand
par-1-RQ 1..1074 577..1650 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 09:43:50 Download gff for GH14769.complete
Subject Subject Range Query Range Percent Splice Strand
par-1-RQ 1..1074 577..1650 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:10:53 Download gff for GH14769.complete
Subject Subject Range Query Range Percent Splice Strand
par-1-RQ 1..1074 577..1650 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:11:10 Download gff for GH14769.complete
Subject Subject Range Query Range Percent Splice Strand
par-1-RQ 1..1074 577..1650 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 20:45:25 Download gff for GH14769.complete
Subject Subject Range Query Range Percent Splice Strand
par-1-RQ 1..3287 1..3287 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:19:52 Download gff for GH14769.complete
Subject Subject Range Query Range Percent Splice Strand
par-1-RQ 1..3287 1..3287 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:43:50 Download gff for GH14769.complete
Subject Subject Range Query Range Percent Splice Strand
par-1-RQ 35..3321 1..3287 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:10:53 Download gff for GH14769.complete
Subject Subject Range Query Range Percent Splice Strand
par-1-RQ 1..3287 1..3287 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:11:10 Download gff for GH14769.complete
Subject Subject Range Query Range Percent Splice Strand
par-1-RQ 35..3321 1..3287 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:04:24 Download gff for GH14769.complete
Subject Subject Range Query Range Percent Splice Strand
2R 19462536..19462779 1..244 100 -> Plus
2R 19464310..19465694 245..1629 100 -> Plus
2R 19466156..19467813 1630..3287 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:04:24 Download gff for GH14769.complete
Subject Subject Range Query Range Percent Splice Strand
2R 19462536..19462779 1..244 100 -> Plus
2R 19464310..19465694 245..1629 100 -> Plus
2R 19466156..19467813 1630..3287 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:04:24 Download gff for GH14769.complete
Subject Subject Range Query Range Percent Splice Strand
2R 19462536..19462779 1..244 100 -> Plus
2R 19464310..19465694 245..1629 100 -> Plus
2R 19466156..19467813 1630..3287 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:43:50 Download gff for GH14769.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 15350041..15350284 1..244 100 -> Plus
arm_2R 15351815..15353199 245..1629 100 -> Plus
arm_2R 15353661..15355318 1630..3287 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:43:15 Download gff for GH14769.complete
Subject Subject Range Query Range Percent Splice Strand
2R 19465509..19466893 245..1629 100 -> Plus
2R 19463735..19463978 1..244 100 -> Plus
2R 19467355..19469012 1630..3287 100   Plus

GH14769.pep Sequence

Translation from 576 to 1649

> GH14769.pep
MGQTSSHRQMHHSSNNNNKEEPPQPASQFGNRRTSTRKSTSSSKHYPTLV
QPLRKDELSLLRDSLLRNGSIMRKNPERRPVTISELKPVNTGQGTSGSVL
PITAEDAAGGSSSSITQLMAFQLPVDRSAKTDDLAAESSASAAAAVAPKE
GRNEFYIVGDGYHRTDHCYYRSPNGDFHKLPSDSFHKMSEGCFVRMADGV
FRRLEVPTKAQISRRSSRAEEIGDATSQGNGSAATNVKSQLMRFLKRSKS
HTPATIAKLQREKEEARAERKQRLSNALRQKNLAATNAASAAAANSSYAS
GGGGGTVSSRNNKIVVTMIENGGLPIVATSKAERPKAKESASSSDKARNS
RIFVTPH*

GH14769.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 05:01:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11716-PA 589 GF11716-PA 231..586 1..356 1234 79.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 05:01:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21977-PA 357 GG21977-PA 1..357 1..357 1839 96.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 05:01:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20209-PA 365 GH20209-PA 1..330 1..336 873 54.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:27:59
Subject Length Description Subject Range Query Range Score Percent Strand
par-1-PQ 357 CG8201-PQ 1..357 1..357 1800 100 Plus
par-1-PH 993 CG8201-PH 1..351 1..351 1766 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 05:01:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20734-PA 350 GI20734-PA 1..337 1..352 919 57.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 05:01:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL10530-PA 368 GL10530-PA 1..364 1..354 1233 73.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 05:01:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA24398-PA 385 GA24398-PA 1..365 1..353 1235 73.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 05:01:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM13293-PA 357 GM13293-PA 1..357 1..357 1864 98.6 Plus
Dsec\GM21965-PA 84 GM21965-PA 1..76 1..76 238 92.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 05:01:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11459-PA 357 GD11459-PA 1..357 1..357 1856 98.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 05:01:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ20471-PA 350 GJ20471-PA 1..337 1..352 1028 64.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 05:01:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15873-PA 630 GK15873-PA 233..616 1..354 1135 66.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 05:01:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12056-PA 357 GE12056-PA 1..357 1..357 1850 97.5 Plus

GH14769.hyp Sequence

Translation from 576 to 1649

> GH14769.hyp
MGQTSSHRQMHHSSNNNNKEEPPQPASQFGNRRTSTRKSTSSSKHYPTLV
QPLRKDELSLLRDSLLRNGSIMRKNPERRPVTISELKPVNTGQGTSGSVL
PITAEDAAGGSSSSITQLMAFQLPVDRSAKTDDLAAESSASAAAAVAPKE
GRNEFYIVGDGYHRTDHCYYRSPNGDFHKLPSDSFHKMSEGCFVRMADGV
FRRLEVPTKAQISRRSSRAEEIGDATSQGNGSAATNVKSQLMRFLKRSKS
HTPATIAKLQREKEEARAERKQRLSNALRQKNLAATNAASAAAANSSYAS
GGGGGTVSSRNNKIVVTMIENGGLPIVATSKAERPKAKESASSSDKARNS
RIFVTPH*

GH14769.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 07:57:07
Subject Length Description Subject Range Query Range Score Percent Strand
par-1-PQ 357 CG8201-PQ 1..357 1..357 1800 100 Plus
par-1-PH 993 CG8201-PH 1..351 1..351 1766 100 Plus