BDGP Sequence Production Resources |
Search the DGRC for GH14842
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 148 |
Well: | 42 |
Vector: | pOT2 |
Associated Gene/Transcript | Aplip1-RB |
Protein status: | GH14842.pep: gold |
Preliminary Size: | 1731 |
Sequenced Size: | 1772 |
Gene | Date | Evidence |
---|---|---|
CG1200 | 2001-01-01 | Release 2 assignment |
CG1200 | 2001-07-04 | Blastp of sequenced clone |
CG1200 | 2003-01-01 | Sim4 clustering to Release 3 |
Aplip1 | 2008-04-29 | Release 5.5 accounting |
Aplip1 | 2008-08-15 | Release 5.9 accounting |
Aplip1 | 2008-12-18 | 5.12 accounting |
1772 bp (1772 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051495
> GH14842.complete GGGCACGCCAGCAACGTCAAGGAAATTATCGATTTTCGCATGTGAAGTGA AAAAAGTGACTCCGTTGGCAAAAAAACTGTAGCGCGAGCAGGACTCCAGT GAAAATCTAACCAAAAGCAGTTCACACGGACTAACTAAAAGCCCCAGCTA GCCTGTAGTGGAGGGCGTGGCAGCTGGTCGGACCCTGGTCCCCAAACGAC ATGGCCGACAGCGAATTCGAGGAGTTCCACAGGCCCATATTTGAGCCACA TACGATTGCTGGATTCGGATCAGGAGCAGGCAGCAAGAAGAATAATCCAC ATGCATTTTACTCCTTAATTCCCAACGATGACCTGGAGGACTCGCACTCC TCGAAGAGCGATGGCGACGGTTCGGATCAGGAGGATGGCATTGGTCTTGT GGATCACGAGCCCAAGATGCGTCAAGTGGAGGACGATGAGCTGGGCGACG GGCTGAAAGTCACTCTGTCCTCGGACGGCTCGCTGGACACCAACGACTCG TTTAATTCGCACCGACATCATCCGTTGAACCACCAGGATGCGATTGGTGG CTTCCTGGGCATGGACACCAGTGGATTGGGTGGCAATAGTGCACCTGTGA CCATTGGAGCCAGCACAGATCTGCTGGCACCCAATACAGCTGCCACGCGA CGTCGTCGCAAGTTGCCGGAAATACCGAAAAACAAGAAATCTTCCATTCT GCATCTTCTAGGTGGCTCCAACTTTGGCTCCCTGGCGGATGAGTTCCGCA ACGGTGGTGGTGGAGGAATCCCTCCAGCAGTTCGCAGTGGACAACAGCGC TCATTTCTGTCCCTCAAATGCGGCTACTTGATGGACGAGGACTCCAGTCC GGATTCGGAAAGGATGCAGAGTCTGGGCGACGTGGACAGTGGTCACAGCA CGGCGCATTCGCCCAACGACTTTAAGAGCATGTCGCCGCAGATCACGTCT CCCGTTTCGCAGTCCCCCTTTCCGCCTCCCTTTGGGGGCGTGCCCTTTGG CCAGCTGGAGATGCTGGAGGCCACTCACCGTGGTCTGCACAAGTTTGTGC CGCGGCACCACGACGAGATCGAGCTGGAGATCGGCGACGCCATCTACGTG CAAAAGGAGGCCGAGGACCTGTGGTGCGAGGGTGTGAATCTCCGCACCGG AAGGCAGGGCATCTTCCCCTCGGCCTACGCCGTGGACCTGGACTACAACG AGTTCGATCCCACAGTGCAGCTGGTGAAGAAGGAGCGCTATCTGCTGGGC TACCTCGGATCCGTGGAGACGCTGGCGCACAAGGGCACCGGAGTCGTTTG CCAGGCGGTGCGCAAGATTGTCGGGGAGTACGGCAACTCACCGACCGGAC AGACGTGCATCCTGGAGGTTTCCGACCAGGGACTTCGCATGGTGGATCGA TCGGGCCCGAATCAAAACAAAAAGGACAAGAAACCTTGCATCGACTACTT CTACTCCCTGAAGAACGTCTCCTTCTGCGCATTTCACCCTCGCGATCACC GCTTCATTGGCTTCATCACCAAACATCCCACGGTTCAGCGGTTCGCCTGC CACGTCTTCAAGGGCTCGGAGTCGACCAGACCGGTGGCCGAGGCAGTGGG CCGTGCTTTCCAGCGATTCTATCAGAAATTCATTGAAACCGCTTATCCCA TCGAGGACATCTACATTGAGTAGGCTTGCAAGGCGGTTTGTGCATTAATC AATACGATATATTTTTTGTGCGGTTATTACGAATAAAAGCAAAGATAAGT CTCAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 1197040..1197761 | 691..1412 | 3565 | 99.6 | Plus |
chr3L | 24539361 | chr3L | 1196469..1196844 | 315..690 | 1865 | 99.7 | Plus |
chr3L | 24539361 | chr3L | 1195883..1196194 | 1..313 | 1470 | 98.7 | Plus |
chr3L | 24539361 | chr3L | 1197832..1198019 | 1413..1600 | 940 | 100 | Plus |
chr3L | 24539361 | chr3L | 1198089..1198240 | 1602..1753 | 760 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 1197509..1198230 | 691..1412 | 3610 | 100 | Plus |
3L | 28110227 | 3L | 1196937..1197313 | 314..690 | 1885 | 100 | Plus |
3L | 28110227 | 3L | 1196344..1196655 | 1..313 | 1515 | 99.7 | Plus |
3L | 28110227 | 3L | 1198299..1198486 | 1413..1600 | 940 | 100 | Plus |
3L | 28110227 | 3L | 1198554..1198709 | 1600..1755 | 780 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 1197509..1198230 | 691..1412 | 3610 | 100 | Plus |
3L | 28103327 | 3L | 1196937..1197313 | 314..690 | 1885 | 100 | Plus |
3L | 28103327 | 3L | 1196344..1196655 | 1..313 | 1525 | 99.6 | Plus |
3L | 28103327 | 3L | 1198299..1198486 | 1413..1600 | 940 | 100 | Plus |
3L | 28103327 | 3L | 1198554..1198709 | 1600..1755 | 780 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 1195883..1196194 | 1..313 | 98 | -> | Plus |
chr3L | 1196468..1196844 | 314..690 | 99 | -> | Plus |
chr3L | 1197040..1197761 | 691..1412 | 99 | -> | Plus |
chr3L | 1197832..1198019 | 1413..1600 | 100 | -> | Plus |
chr3L | 1198088..1198240 | 1601..1753 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aplip1-RB | 1..1473 | 201..1673 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aplip1-RB | 1..1473 | 201..1673 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aplip1-RB | 1..1473 | 201..1673 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aplip1-RB | 1..1473 | 201..1673 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aplip1-RB | 1..1473 | 201..1673 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aplip1-RB | 24..1775 | 1..1753 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aplip1-RB | 24..1775 | 1..1753 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aplip1-RB | 28..1779 | 1..1753 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aplip1-RB | 24..1775 | 1..1753 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aplip1-RB | 28..1779 | 1..1753 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1196344..1196655 | 1..313 | 99 | -> | Plus |
3L | 1196937..1197313 | 314..690 | 100 | -> | Plus |
3L | 1197509..1198230 | 691..1412 | 100 | -> | Plus |
3L | 1198299..1198486 | 1413..1600 | 100 | -> | Plus |
3L | 1198555..1198707 | 1601..1753 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1196344..1196655 | 1..313 | 99 | -> | Plus |
3L | 1196937..1197313 | 314..690 | 100 | -> | Plus |
3L | 1197509..1198230 | 691..1412 | 100 | -> | Plus |
3L | 1198299..1198486 | 1413..1600 | 100 | -> | Plus |
3L | 1198555..1198707 | 1601..1753 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1196344..1196655 | 1..313 | 99 | -> | Plus |
3L | 1196937..1197313 | 314..690 | 100 | -> | Plus |
3L | 1197509..1198230 | 691..1412 | 100 | -> | Plus |
3L | 1198299..1198486 | 1413..1600 | 100 | -> | Plus |
3L | 1198555..1198707 | 1601..1753 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 1196344..1196655 | 1..313 | 99 | -> | Plus |
arm_3L | 1196937..1197313 | 314..690 | 100 | -> | Plus |
arm_3L | 1197509..1198230 | 691..1412 | 100 | -> | Plus |
arm_3L | 1198299..1198486 | 1413..1600 | 100 | -> | Plus |
arm_3L | 1198555..1198707 | 1601..1753 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1196937..1197313 | 314..690 | 100 | -> | Plus |
3L | 1196344..1196655 | 1..313 | 99 | -> | Plus |
3L | 1197509..1198230 | 691..1412 | 100 | -> | Plus |
3L | 1198299..1198486 | 1413..1600 | 100 | -> | Plus |
3L | 1198555..1198707 | 1601..1753 | 100 | Plus |
Translation from 200 to 1672
> GH14842.pep MADSEFEEFHRPIFEPHTIAGFGSGAGSKKNNPHAFYSLIPNDDLEDSHS SKSDGDGSDQEDGIGLVDHEPKMRQVEDDELGDGLKVTLSSDGSLDTNDS FNSHRHHPLNHQDAIGGFLGMDTSGLGGNSAPVTIGASTDLLAPNTAATR RRRKLPEIPKNKKSSILHLLGGSNFGSLADEFRNGGGGGIPPAVRSGQQR SFLSLKCGYLMDEDSSPDSERMQSLGDVDSGHSTAHSPNDFKSMSPQITS PVSQSPFPPPFGGVPFGQLEMLEATHRGLHKFVPRHHDEIELEIGDAIYV QKEAEDLWCEGVNLRTGRQGIFPSAYAVDLDYNEFDPTVQLVKKERYLLG YLGSVETLAHKGTGVVCQAVRKIVGEYGNSPTGQTCILEVSDQGLRMVDR SGPNQNKKDKKPCIDYFYSLKNVSFCAFHPRDHRFIGFITKHPTVQRFAC HVFKGSESTRPVAEAVGRAFQRFYQKFIETAYPIEDIYIE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24433-PA | 497 | GF24433-PA | 1..497 | 1..490 | 2332 | 93.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14757-PA | 490 | GG14757-PA | 1..490 | 1..490 | 2610 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15822-PA | 482 | GH15822-PA | 1..482 | 1..490 | 2067 | 84.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Aplip1-PB | 490 | CG1200-PB | 1..490 | 1..490 | 2611 | 100 | Plus |
Aplip1-PA | 483 | CG1200-PA | 1..483 | 1..490 | 2554 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12603-PA | 487 | GI12603-PA | 1..487 | 1..490 | 2141 | 84.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20958-PA | 466 | GL20958-PA | 1..466 | 30..490 | 2136 | 91.5 | Plus |
Dper\GL15754-PA | 466 | GL15754-PA | 1..466 | 30..490 | 2125 | 90.8 | Plus |
Dper\GL19986-PA | 451 | GL19986-PA | 1..451 | 45..490 | 2051 | 91.2 | Plus |
Dper\GL20959-PA | 451 | GL20959-PA | 1..451 | 45..490 | 2048 | 91 | Plus |
Dper\GL20960-PA | 559 | GL20960-PA | 97..559 | 27..490 | 2021 | 87.9 | Plus |
Dper\GL20960-PA | 559 | GL20960-PA | 47..109 | 405..467 | 347 | 96.8 | Plus |
Dper\GL20960-PA | 559 | GL20960-PA | 1..82 | 45..123 | 160 | 50.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11322-PA | 489 | GA11322-PA | 1..489 | 1..490 | 2205 | 89.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14376-PA | 483 | GM14376-PA | 1..483 | 1..490 | 2555 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12726-PA | 501 | GJ12726-PA | 1..501 | 1..490 | 2067 | 79.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17331-PA | 507 | GK17331-PA | 1..507 | 1..490 | 2017 | 81.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21120-PA | 492 | GE21120-PA | 1..492 | 1..490 | 2587 | 98.8 | Plus |
Translation from 200 to 1672
> GH14842.hyp MADSEFEEFHRPIFEPHTIAGFGSGAGSKKNNPHAFYSLIPNDDLEDSHS SKSDGDGSDQEDGIGLVDHEPKMRQVEDDELGDGLKVTLSSDGSLDTNDS FNSHRHHPLNHQDAIGGFLGMDTSGLGGNSAPVTIGASTDLLAPNTAATR RRRKLPEIPKNKKSSILHLLGGSNFGSLADEFRNGGGGGIPPAVRSGQQR SFLSLKCGYLMDEDSSPDSERMQSLGDVDSGHSTAHSPNDFKSMSPQITS PVSQSPFPPPFGGVPFGQLEMLEATHRGLHKFVPRHHDEIELEIGDAIYV QKEAEDLWCEGVNLRTGRQGIFPSAYAVDLDYNEFDPTVQLVKKERYLLG YLGSVETLAHKGTGVVCQAVRKIVGEYGNSPTGQTCILEVSDQGLRMVDR SGPNQNKKDKKPCIDYFYSLKNVSFCAFHPRDHRFIGFITKHPTVQRFAC HVFKGSESTRPVAEAVGRAFQRFYQKFIETAYPIEDIYIE*