Clone GH14845 Report

Search the DGRC for GH14845

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:148
Well:45
Vector:pOT2
Associated Gene/TranscriptAdenoK-RA
Protein status:GH14845.pep: gold
Preliminary Size:1796
Sequenced Size:1587

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG11255 2001-01-01 Release 2 assignment
CG11255 2001-10-10 Blastp of sequenced clone
CG11255 2003-01-01 Sim4 clustering to Release 3
CG11255 2008-04-29 Release 5.5 accounting
CG11255 2008-08-15 Release 5.9 accounting
CG11255 2008-12-18 5.12 accounting

Clone Sequence Records

GH14845.complete Sequence

1587 bp (1587 high quality bases) assembled on 2001-10-10

GenBank Submission: AY060709

> GH14845.complete
CAACTCGCGCTTCCGACGACAGCAGCCCGTGGTAAATCACCTATAAATAT
AAATATACGTGACTATATCTCCCGATTCGATTCTACGCCGGATAGCGACT
TATACGAGTTGAGAGCGCAGGCGGCCACCTGAAGTGCAATACCTTGTTTA
TGTTTACATAAGAAGGCAGCAGCAGCAACAACAACAATCACACGAGGAGA
ATGACGAGCACGCTACAAGAAGGAATCCTGGTCGGATGCGGCAACCCGCT
GCTGGACATCTCCGCCGTTGTTCCACTGAACTTCCTGCAGAAGTACTCTA
TGAACGAGGATGATGCGATCCTTGCCGAGGACCGACACATGCCCATCTAC
GGGGAGCTGGTCGAAGGCTACCAGGCTGAGTTTCTGGCTGGCGGATCCGT
GCAAAATTCTCTGAGAATTGCCCAATGGATTCTTCGACAGCCCAGGGTGG
CTGTGTTCTTCGGCTGCGTCGGCGAGGATCGGTACGCCAATATCTTGAAG
GAAAAGGCGCAAGCCGCCGGACTGGATGTTCACTACCAGGTGAAGAAGGA
CGTGCCCACGGGAACCTGTGCCGTTCTGATCACCGGCACCCACCGATCGC
TCTGCGCTAATCTGGCGGCCGCCAATAACTTCACCATCGATCACCTGGAG
GAGCCCAGCAACAAGGCTCTGGTGGATAACGCCCAGTACTACTACATTTC
GGGCTTCTTCCTCACTGTGAACCCGCCAAGCATTATGCAGGTGGCGGCCA
CCGCCCACGCCAAACAGCGACCGTTCCTAATGAACCTCAGCGCACCATTC
ATATCGCAATTCTACATGGCACCGCTGCTGGCCGCCCTGCCTTACGTGGA
CATCATCTTTGGCAACGAGGCGGAGGCTCAGGCGTTCGCCGAGGCCCAGC
AGTGGCCTAGCGGGGACCTGCGCGAGATTGGCAAGCGACTGGTGGCGATG
GAGAAGAAAAACCCGACGCGGCCGCGCATTGCCATTCTCACGCAGGGCTG
CGATCCTGTACTGCTTATACAGCAGGATTCGGTGCAGGAATTCCCGGTCA
CGAAATTGGCGGTGCATGAAATTGTCGATACCAATGGCGCTGGGGATGCA
TTCGTTGGAGGTTTCCTATCGCAGTTTGTGCAGGGCAAGTCGCTGGATGT
CTGCATCAGGTGCGGAAACTATGCAGCCGGGCACATTATCAAGAATCCAG
GTTGCACATACTCCGGCGAACCGGAGTTCGTTGAGTAAAACCGGATGCGG
AAGCTACAGAAACCTTACACACATCGGACATCGAAGGAGCCAGACAAAGC
GCAGCAAGATTTGCAATTGTTAATTAAGTAAATGAGAGTGACTAAAAGAT
TTTGTTAACACTGATAATTGTTTGTACATACATATAACCCACACTCAGAC
ACATACAAAAGCATACACATGTGAAATGACATGAACAAATAGAGAGAGTG
AGGCTTGTGTCTTATAGATAGAGCAATATTCGAATTTAAATTGATAATAA
AACAAAAGTGACACGCGAGCGAGACACAAAAGTCAACATTTTGTACAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

GH14845.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:03:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG11255-RA 1749 CG11255-RA 150..1697 1..1548 7740 100 Plus
CG11255-RB 1503 CG11255-RB 121..1451 218..1548 6655 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 06:38:27
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 13010281..13011126 1546..701 4230 100 Minus
chr3L 24539361 chr3L 13011372..13011856 702..218 2425 100 Minus
chr3L 24539361 chr3L 13012737..13012953 217..1 1085 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:53:08 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 06:38:24
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 13019980..13020827 1548..701 4240 100 Minus
3L 28110227 3L 13021073..13021557 702..218 2425 100 Minus
3L 28110227 3L 13022438..13022654 217..1 1085 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:27:50
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 13013080..13013927 1548..701 4240 100 Minus
3L 28103327 3L 13014173..13014657 702..218 2425 100 Minus
3L 28103327 3L 13015538..13015754 217..1 1085 100 Minus
Blast to na_te.dros performed 2019-03-16 06:38:25
Subject Length Description Subject Range Query Range Score Percent Strand
roo 9092 roo DM_ROO 9092bp 8377..8637 1234..1491 127 52.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2492..2534 156..199 118 77.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6776..6831 167..220 113 69.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6881..6926 167..212 113 71.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2322..2365 167..210 112 72.7 Plus

GH14845.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 06:39:04 Download gff for GH14845.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 13010281..13011125 702..1546 100 <- Minus
chr3L 13011373..13011856 218..701 100 <- Minus
chr3L 13012737..13012953 1..217 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:43:46 Download gff for GH14845.complete
Subject Subject Range Query Range Percent Splice Strand
CG11255-RA 1..1038 201..1238 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:37:45 Download gff for GH14845.complete
Subject Subject Range Query Range Percent Splice Strand
CG11255-RA 1..1038 201..1238 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 09:44:42 Download gff for GH14845.complete
Subject Subject Range Query Range Percent Splice Strand
CG11255-RA 1..1038 201..1238 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:06:38 Download gff for GH14845.complete
Subject Subject Range Query Range Percent Splice Strand
CG11255-RA 1..1038 201..1238 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:18:56 Download gff for GH14845.complete
Subject Subject Range Query Range Percent Splice Strand
AdenoK-RA 1..1038 201..1238 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:18:32 Download gff for GH14845.complete
Subject Subject Range Query Range Percent Splice Strand
CG11255-RA 91..1632 1..1542 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:37:45 Download gff for GH14845.complete
Subject Subject Range Query Range Percent Splice Strand
CG11255-RA 91..1636 1..1546 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:44:42 Download gff for GH14845.complete
Subject Subject Range Query Range Percent Splice Strand
CG11255-RA 35..1580 1..1546 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:06:39 Download gff for GH14845.complete
Subject Subject Range Query Range Percent Splice Strand
CG11255-RA 91..1632 1..1542 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:18:56 Download gff for GH14845.complete
Subject Subject Range Query Range Percent Splice Strand
AdenoK-RA 35..1580 1..1546 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:39:04 Download gff for GH14845.complete
Subject Subject Range Query Range Percent Splice Strand
3L 13019982..13020826 702..1546 100 <- Minus
3L 13021074..13021557 218..701 100 <- Minus
3L 13022438..13022654 1..217 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:39:04 Download gff for GH14845.complete
Subject Subject Range Query Range Percent Splice Strand
3L 13019982..13020826 702..1546 100 <- Minus
3L 13021074..13021557 218..701 100 <- Minus
3L 13022438..13022654 1..217 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:39:04 Download gff for GH14845.complete
Subject Subject Range Query Range Percent Splice Strand
3L 13019982..13020826 702..1546 100 <- Minus
3L 13021074..13021557 218..701 100 <- Minus
3L 13022438..13022654 1..217 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:44:42 Download gff for GH14845.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 13013082..13013926 702..1546 100 <- Minus
arm_3L 13014174..13014657 218..701 100 <- Minus
arm_3L 13015538..13015754 1..217 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:42:41 Download gff for GH14845.complete
Subject Subject Range Query Range Percent Splice Strand
3L 13014174..13014657 218..701 100 <- Minus
3L 13015538..13015754 1..217 100   Minus
3L 13013082..13013926 702..1546 100 <- Minus

GH14845.pep Sequence

Translation from 200 to 1237

> GH14845.pep
MTSTLQEGILVGCGNPLLDISAVVPLNFLQKYSMNEDDAILAEDRHMPIY
GELVEGYQAEFLAGGSVQNSLRIAQWILRQPRVAVFFGCVGEDRYANILK
EKAQAAGLDVHYQVKKDVPTGTCAVLITGTHRSLCANLAAANNFTIDHLE
EPSNKALVDNAQYYYISGFFLTVNPPSIMQVAATAHAKQRPFLMNLSAPF
ISQFYMAPLLAALPYVDIIFGNEAEAQAFAEAQQWPSGDLREIGKRLVAM
EKKNPTRPRIAILTQGCDPVLLIQQDSVQEFPVTKLAVHEIVDTNGAGDA
FVGGFLSQFVQGKSLDVCIRCGNYAAGHIIKNPGCTYSGEPEFVE*

GH14845.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 11:38:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF25174-PA 339 GF25174-PA 1..339 7..345 1573 87 Plus
Dana\GF17233-PA 347 GF17233-PA 3..344 5..345 721 44 Plus
Dana\GF12238-PA 365 GF12238-PA 87..362 64..335 250 28.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 11:38:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13787-PA 345 GG13787-PA 1..345 1..345 1825 98.6 Plus
Dere\GG18640-PA 397 GG18640-PA 53..394 5..345 731 44 Plus
Dere\GG10762-PA 366 GG10762-PA 87..364 64..336 269 28.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 11:38:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH23323-PA 348 GH23323-PA 1..347 1..345 1548 82.1 Plus
Dgri\GH15477-PA 347 GH15477-PA 5..342 7..343 774 44 Plus
Dgri\GH20370-PA 364 GH20370-PA 31..362 10..336 260 27.1 Plus
Dgri\GH22195-PA 341 GH22195-PA 31..339 10..336 224 25.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:27:29
Subject Length Description Subject Range Query Range Score Percent Strand
AdenoK-PC 345 CG11255-PC 1..345 1..345 1794 100 Plus
AdenoK-PA 345 CG11255-PA 1..345 1..345 1794 100 Plus
AdenoK-PB 345 CG11255-PB 1..345 1..345 1771 98.6 Plus
CG3809-PA 396 CG3809-PA 52..393 5..345 710 44 Plus
Ady43A-PA 366 CG1851-PA 87..363 64..335 267 28 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 11:39:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13634-PA 346 GI13634-PA 1..346 1..345 1596 85.5 Plus
Dmoj\GI10274-PA 411 GI10274-PA 67..408 5..345 768 43.7 Plus
Dmoj\GI20045-PA 365 GI20045-PA 87..363 64..336 267 26.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 11:39:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24870-PA 345 GL24870-PA 1..345 1..345 1671 89 Plus
Dper\GL22267-PA 347 GL22267-PA 3..344 5..345 737 44.6 Plus
Dper\GL10944-PA 368 GL10944-PA 36..363 14..335 256 27.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 11:39:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA23538-PA 340 GA23538-PA 1..340 1..345 1635 88.1 Plus
Dpse\GA17700-PA 347 GA17700-PA 3..344 5..345 744 44.6 Plus
Dpse\GA14968-PA 368 GA14968-PA 36..363 14..335 260 27.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 11:39:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24613-PA 345 GM24613-PA 1..345 1..345 1830 98.8 Plus
Dsec\GM24000-PA 396 GM24000-PA 52..393 5..345 726 43.7 Plus
Dsec\GM20810-PA 366 GM20810-PA 87..364 64..336 267 28.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 11:39:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12680-PA 345 GD12680-PA 1..345 1..345 1833 99.1 Plus
Dsim\GD18802-PA 347 GD18802-PA 3..344 5..345 728 43.7 Plus
Dsim\GD10267-PA 343 GD10267-PA 87..340 64..335 226 27.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 11:39:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13971-PA 346 GJ13971-PA 1..346 1..345 1568 83.2 Plus
Dvir\GJ11082-PA 347 GJ11082-PA 3..344 5..345 786 44.9 Plus
Dvir\GJ21287-PA 367 GJ21287-PA 88..364 64..335 296 26.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 11:39:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17347-PA 345 GK17347-PA 1..345 1..345 1636 87.2 Plus
Dwil\GK11532-PA 354 GK11532-PA 3..319 5..320 770 46.2 Plus
Dwil\GK21524-PA 367 GK21524-PA 87..362 64..335 249 27.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 11:39:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20080-PA 345 GE20080-PA 1..345 1..345 1826 98.6 Plus
Dyak\GE26161-PA 347 GE26161-PA 3..344 5..345 727 43.1 Plus
Dyak\GE24147-PA 366 GE24147-PA 87..364 64..336 265 28.5 Plus

GH14845.hyp Sequence

Translation from 200 to 1237

> GH14845.hyp
MTSTLQEGILVGCGNPLLDISAVVPLNFLQKYSMNEDDAILAEDRHMPIY
GELVEGYQAEFLAGGSVQNSLRIAQWILRQPRVAVFFGCVGEDRYANILK
EKAQAAGLDVHYQVKKDVPTGTCAVLITGTHRSLCANLAAANNFTIDHLE
EPSNKALVDNAQYYYISGFFLTVNPPSIMQVAATAHAKQRPFLMNLSAPF
ISQFYMAPLLAALPYVDIIFGNEAEAQAFAEAQQWPSGDLREIGKRLVAM
EKKNPTRPRIAILTQGCDPVLLIQQDSVQEFPVTKLAVHEIVDTNGAGDA
FVGGFLSQFVQGKSLDVCIRCGNYAAGHIIKNPGCTYSGEPEFVE*

GH14845.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 07:57:56
Subject Length Description Subject Range Query Range Score Percent Strand
AdenoK-PC 345 CG11255-PC 1..345 1..345 1794 100 Plus
AdenoK-PA 345 CG11255-PA 1..345 1..345 1794 100 Plus
AdenoK-PB 345 CG11255-PB 1..345 1..345 1771 98.6 Plus
CG3809-PA 396 CG3809-PA 52..393 5..345 710 44 Plus
Ady43A-PA 366 CG1851-PA 87..363 64..335 267 28 Plus