Clone GH14865 Report

Search the DGRC for GH14865

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:148
Well:65
Vector:pOT2
Associated Gene/Transcriptfusl-RA
Protein status:GH14865.pep: gold
Preliminary Size:1737
Sequenced Size:1944

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG14021 2001-09-19 Blastp of sequenced clone
CG14021 2003-01-01 Sim4 clustering to Release 3
CG14021 2008-04-29 Release 5.5 accounting
CG14021 2008-08-15 Release 5.9 accounting
CG14021 2008-12-18 5.12 accounting

Clone Sequence Records

GH14865.complete Sequence

1944 bp (1944 high quality bases) assembled on 2001-09-19

GenBank Submission: AY058386

> GH14865.complete
AGCCGCCGACGAGCAGCGAACAGGAGCTCTCCCAGCCGAAATATCCGGAG
TGATAATTGCCCATAATTGAAGGAAATTAACAGAGGAGAAGGGAGGCGCA
GGAGAAGGAGGAGGAGGAGGAGGAGGAGGAGACCTTAAAAGCCTGTAAAA
TCCCAATAAACCCGAGATGTTGCCCACGGACAAGGGCAGTTTGACGGCCG
GCAGGCCGCAAAAATCTCATTGCCATGGATCGGTATCCGTGTCGGATCAG
CAGCTCCTGCAGCACCTCCATCCACACACGCATCCGCGTCCAGTGCACCT
GCCACCCGCACATGCCACACACTCACCCGCCTGCGAGAAGCGCTTGGAGG
CGGAGACGCCGCGCCGGGATCTCCACGAGCTGCTGCTCGAGCTGCTGGAC
ATGATGATGTCCTGCCTGGTGGTGGCTCCCTGTGTGATCGCCTACTGGCG
TGGCACCTGGGAACTGATGTTCGTCTACCTGTTTCCCGGCAGCTTGCCGC
TGTCTGCGATGGCCAGCTTTCTGATCGGCGGACTGGGGCACTTCTTCTTC
ACAGTCACACAGAACTTCTTCAAGGAGCACATCCATCCGGACCGGAGGCG
ACTCACATACTACGCCGTATCGCGTCTCTATACGGCCGTATTCGGCATCG
TTTGCGTGAATATGTGGCGTGGTGCCTGGCTGCTCTGCGATTGGCTGACC
AGTGTGGACTCTCTGATCATTGTGTCCGTGGTCACGGCCATCGCGCTCAT
CTTTCTGGTAGCCACACGCACTCTGCGGAACCTCGGAGCAGCTCCCTACA
CCGTTACCATGGATCACAAGAGTGACTACTTTGAGGTGGACACCATGTTC
AAAATACCCGGTTTTCATCAACCTGGCCTTTACATTTTGGACACCCTCTT
CTCGGTCTTTGTGATCGGCAGCCTGGTGGTCATCGCTTGGCGCGGCGTCT
GGGGAATCTTTGACCTGCTGCTGTTCCCGGCGGACAAGGCCAAATCGGCC
TGGGGATCGCTGCTCATTGGATATCTGACGGTTTTTGTGACCTTCCTTAT
TCACCCACTGATGAGGTACGTTTGTCGTCGGATCAGCGGAATCCTCAAGC
TGATCATATGCGACATCTACTATCTAATGACTTTCTTTGGAGCTGTGAAC
GCCTGGCGCGGCATCTGGAATCTGCTGGATGTGTATCTGTATCCAGATAA
CAAGCTGCTGAGCTTCTGGCTGACACATATCGTTCCTTTCCTGCTCCTCG
CTGCCCTCAAGTGCTCCAATTCCATCCTGGTGCGCGGCGTGTTCATCGAC
GCCGAGGGCGTGGGCGCCGATAGCGTCGATATACCCATTAACTATGTGCG
ACTGCACTTCCTCCGCGAGCGTCGGAAGAAGGCGGGCCTTCAAGCCACAT
CGCAGCCTCCGCCGCCGCATTACTATCTAAAACCGGAGCACGTCTCAATC
GGCCGGAATGCGGAGAAGGACAAGGAGGCACAGAGTAGCCTCATCGAGAA
ACCACATGCCGCCGTGCAGATCGTTTAGGAATTCGGATTCCAGGCGCATG
GCTAGCGTTTCTATGTCTAGTTGGTAACCTAGTTGTAATCGCCTAAGCTT
AATCGTATTGAGCTTACTTAAGAGTCAGTTGTTTAGCATTAACCATAGAT
GTGGTCTCTATCCCGATCGCAAATCCCAAAACTGTACAGAAATTTAAGGA
TCGACGTATCTAGAGTTTAAGTATATATGCATTTTTCACAGCAGGTTTAT
GTTTTTCGAATTTTAACCTGGTGACGAAGGCAACCTCACCCACTCACATT
TTAGCTAAGTGTTTAGCTAACGATTCAATTACGAGTATAAACATTGTACA
TTGGTATTTTCATATATCGCAAGCAGCAAATAAATTAATTTGTAAATACT
ACGTATAAAATATATAACCAAACCACAAAAAAAAAAAAAAAAAA

GH14865.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:22:44
Subject Length Description Subject Range Query Range Score Percent Strand
fusl.c 2768 fusl.c 830..2758 1..1929 9645 100 Plus
fusl.d 3009 fusl.d 1071..2999 1..1929 9645 100 Plus
fusl.b 2310 fusl.b 372..2300 1..1929 9645 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 19:08:18
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 5330820..5331679 860..1 4300 100 Minus
chr2L 23010047 chr2L 5329569..5330301 1926..1194 3665 100 Minus
chr2L 23010047 chr2L 5330358..5330546 1200..1012 930 99.5 Minus
chr2L 23010047 chr2L 5330607..5330759 1012..860 765 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:53:09 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 19:08:17
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5331721..5332580 860..1 4300 100 Minus
2L 23513712 2L 5330467..5331202 1929..1194 3680 100 Minus
2L 23513712 2L 5331259..5331447 1200..1012 930 99.5 Minus
2L 23513712 2L 5331508..5331660 1012..860 765 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:45:31
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5331721..5332580 860..1 4300 100 Minus
2L 23513712 2L 5330467..5331202 1929..1194 3680 100 Minus
2L 23513712 2L 5331259..5331447 1200..1012 930 99.4 Minus
2L 23513712 2L 5331508..5331660 1012..860 765 100 Minus
Blast to na_te.dros performed on 2019-03-15 19:08:17 has no hits.

GH14865.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 19:09:15 Download gff for GH14865.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 5329569..5330298 1197..1926 100 <- Minus
chr2L 5330362..5330545 1013..1196 100 <- Minus
chr2L 5330607..5330759 860..1012 100 <- Minus
chr2L 5330821..5331679 1..859 94   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:43:47 Download gff for GH14865.complete
Subject Subject Range Query Range Percent Splice Strand
CG14021-RA 1..1362 167..1528 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:07:17 Download gff for GH14865.complete
Subject Subject Range Query Range Percent Splice Strand
fusl-RA 1..1362 167..1528 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:42:54 Download gff for GH14865.complete
Subject Subject Range Query Range Percent Splice Strand
fusl-RD 1..1362 167..1528 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:38:05 Download gff for GH14865.complete
Subject Subject Range Query Range Percent Splice Strand
CG14021-RA 1..1362 167..1528 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:10:54 Download gff for GH14865.complete
Subject Subject Range Query Range Percent Splice Strand
fusl-RD 1..1362 167..1528 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:57:19 Download gff for GH14865.complete
Subject Subject Range Query Range Percent Splice Strand
CG14021-RA 691..2616 1..1926 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:07:17 Download gff for GH14865.complete
Subject Subject Range Query Range Percent Splice Strand
fusl-RA 691..2616 1..1926 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:42:54 Download gff for GH14865.complete
Subject Subject Range Query Range Percent Splice Strand
fusl-RD 778..2703 1..1926 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:38:05 Download gff for GH14865.complete
Subject Subject Range Query Range Percent Splice Strand
CG14021-RA 691..2616 1..1926 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:10:54 Download gff for GH14865.complete
Subject Subject Range Query Range Percent Splice Strand
fusl-RD 778..2703 1..1926 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:09:15 Download gff for GH14865.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5330470..5331199 1197..1926 100 <- Minus
2L 5331263..5331446 1013..1196 100 <- Minus
2L 5331508..5331660 860..1012 100 <- Minus
2L 5331722..5332580 1..859 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:09:15 Download gff for GH14865.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5330470..5331199 1197..1926 100 <- Minus
2L 5331263..5331446 1013..1196 100 <- Minus
2L 5331508..5331660 860..1012 100 <- Minus
2L 5331722..5332580 1..859 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:09:15 Download gff for GH14865.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5330470..5331199 1197..1926 100 <- Minus
2L 5331263..5331446 1013..1196 100 <- Minus
2L 5331508..5331660 860..1012 100 <- Minus
2L 5331722..5332580 1..859 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:42:54 Download gff for GH14865.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 5330470..5331199 1197..1926 100 <- Minus
arm_2L 5331263..5331446 1013..1196 100 <- Minus
arm_2L 5331508..5331660 860..1012 100 <- Minus
arm_2L 5331722..5332580 1..859 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:15:19 Download gff for GH14865.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5330470..5331199 1197..1926 100 <- Minus
2L 5331263..5331446 1013..1196 100 <- Minus
2L 5331508..5331660 860..1012 100 <- Minus
2L 5331722..5332580 1..859 100   Minus

GH14865.pep Sequence

Translation from 166 to 1527

> GH14865.pep
MLPTDKGSLTAGRPQKSHCHGSVSVSDQQLLQHLHPHTHPRPVHLPPAHA
THSPACEKRLEAETPRRDLHELLLELLDMMMSCLVVAPCVIAYWRGTWEL
MFVYLFPGSLPLSAMASFLIGGLGHFFFTVTQNFFKEHIHPDRRRLTYYA
VSRLYTAVFGIVCVNMWRGAWLLCDWLTSVDSLIIVSVVTAIALIFLVAT
RTLRNLGAAPYTVTMDHKSDYFEVDTMFKIPGFHQPGLYILDTLFSVFVI
GSLVVIAWRGVWGIFDLLLFPADKAKSAWGSLLIGYLTVFVTFLIHPLMR
YVCRRISGILKLIICDIYYLMTFFGAVNAWRGIWNLLDVYLYPDNKLLSF
WLTHIVPFLLLAALKCSNSILVRGVFIDAEGVGADSVDIPINYVRLHFLR
ERRKKAGLQATSQPPPPHYYLKPEHVSIGRNAEKDKEAQSSLIEKPHAAV
QIV*

GH14865.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 11:57:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15514-PA 468 GF15514-PA 1..468 1..453 1973 81.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 11:57:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24307-PA 449 GG24307-PA 1..449 1..453 2301 96 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 11:57:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13535-PA 471 GH13535-PA 1..471 1..453 1671 69 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:54:27
Subject Length Description Subject Range Query Range Score Percent Strand
fusl-PF 453 CG14021-PF 1..453 1..453 2409 100 Plus
fusl-PE 453 CG14021-PE 1..453 1..453 2409 100 Plus
fusl-PD 453 CG14021-PD 1..453 1..453 2409 100 Plus
fusl-PC 453 CG14021-PC 1..453 1..453 2409 100 Plus
fusl-PA 453 CG14021-PA 1..453 1..453 2409 100 Plus
fusl-PB 453 CG14021-PB 1..453 1..453 2409 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 11:57:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI10531-PA 460 GI10531-PA 53..460 43..453 1709 78.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 11:57:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL18555-PA 399 GL18555-PA 3..399 56..453 1760 89.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 11:57:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA12704-PA 448 GA12704-PA 11..448 9..453 1676 77.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 11:57:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18024-PA 526 GM18024-PA 76..526 3..453 2380 98.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 11:57:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22654-PA 453 GD22654-PA 1..453 1..453 2393 99.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 11:57:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21747-PA 470 GJ21747-PA 50..470 33..453 1713 78.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 11:57:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK18432-PA 466 GK18432-PA 1..462 1..451 1740 73.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 11:57:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE19002-PA 455 GE19002-PA 1..455 1..453 2334 96.9 Plus

GH14865.hyp Sequence

Translation from 166 to 1527

> GH14865.hyp
MLPTDKGSLTAGRPQKSHCHGSVSVSDQQLLQHLHPHTHPRPVHLPPAHA
THSPACEKRLEAETPRRDLHELLLELLDMMMSCLVVAPCVIAYWRGTWEL
MFVYLFPGSLPLSAMASFLIGGLGHFFFTVTQNFFKEHIHPDRRRLTYYA
VSRLYTAVFGIVCVNMWRGAWLLCDWLTSVDSLIIVSVVTAIALIFLVAT
RTLRNLGAAPYTVTMDHKSDYFEVDTMFKIPGFHQPGLYILDTLFSVFVI
GSLVVIAWRGVWGIFDLLLFPADKAKSAWGSLLIGYLTVFVTFLIHPLMR
YVCRRISGILKLIICDIYYLMTFFGAVNAWRGIWNLLDVYLYPDNKLLSF
WLTHIVPFLLLAALKCSNSILVRGVFIDAEGVGADSVDIPINYVRLHFLR
ERRKKAGLQATSQPPPPHYYLKPEHVSIGRNAEKDKEAQSSLIEKPHAAV
QIV*

GH14865.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 07:58:04
Subject Length Description Subject Range Query Range Score Percent Strand
fusl-PF 453 CG14021-PF 1..453 1..453 2409 100 Plus
fusl-PE 453 CG14021-PE 1..453 1..453 2409 100 Plus
fusl-PD 453 CG14021-PD 1..453 1..453 2409 100 Plus
fusl-PC 453 CG14021-PC 1..453 1..453 2409 100 Plus
fusl-PA 453 CG14021-PA 1..453 1..453 2409 100 Plus