Clone GH14903 Report

Search the DGRC for GH14903

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:149
Well:3
Vector:pOT2
Associated Gene/TranscriptCG32333-RB
Protein status:GH14903.pep: gold
Preliminary Size:1219
Sequenced Size:1107

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG9137 2001-01-01 Release 2 assignment
CG9146 2001-01-01 Release 2 assignment
CG32333 2002-05-16 Blastp of sequenced clone
CG32333 2003-01-01 Sim4 clustering to Release 3
CG32333 2008-04-29 Release 5.5 accounting
CG32333 2008-08-15 Release 5.9 accounting
CG32333 2008-12-18 5.12 accounting

Clone Sequence Records

GH14903.complete Sequence

1107 bp (1107 high quality bases) assembled on 2002-05-16

GenBank Submission: AY119522

> GH14903.complete
TTTCCCGGTGCGGACGTGCGTTTGGCGGTGGAAATTGTCGAGCACGCCGG
AAAAGAAAATCCCACAATAGTTGCGCTCGTTGTAACGTTCGGTTTTGTGC
GGTTTTTCGGTTTATTTTTCGGCTTCTTCTGCACTCTAATTTCATTAGCC
GGAAAAAGGAAAGCGGGGCAATGGCTGTGTGCAAGTAATCCGGATCCGCT
GAAGAACGACGAGGAGCCAATGAACTTGCTGACAACTTGAGACGACCACA
AGGAGGGGAATCCCCTTTGGGCGGTCAAGGAATCGGGGCACCATGGGTGA
CCTACAGGCCACCATTGAATTCGTCGTGGAGCTGCACAAGTTCTTCAATG
TGGATTTGTTTCAGCGCGGACTCTACCAGGTGCGCTGTGGCCTGCGTGTT
TCACCCCGCCTACTTGTGCAGGTGGAGACGAGCATTCCGGAAGCCAGTGG
ACCCGGAAAACAGAACGGACATGCCAACGGGGCCAACGCCACCGACCACG
GCAGCAGCGATAGCGAGAGGGGGGAGCTGTCGCCGGGGGAAGTGCCACGC
CTCCACGAATCACCGCCGGGGGGCAGCTGCTCATCCGCCTCCGTTATCAA
CGGCAGCGGCGCCTCGCGCATCTTCCAGATACTCTACCGCAACGAGGAGG
TTCCGCTGCGCGACATCATCCACTTCAGGAGCCATCTGCTAGTTGACAGT
CGTCACCTGAAGGAGTCCATCGAACGAGCCGAGTTTTCGCTGCAGTTGGA
GCTCTGGTTCGGGGAGCAGAACGGGTCGAGCAGCCTGAACGGCAATGGAG
GCGGCAGTGGGATGGGCAGCTTCTCCGGACCCGCCAGCTCTGCCCTGACA
CTGGCCTCCACCAGGAACCTGCAGCTGAACTTTCATCCGGGACGTGGCCT
TCACTACCATCTGCCTGTGCTGTTCGACTACTTCCATCTGGCGGCCATCA
GTGTGGGCATCCACGCCAGCCTCGTGGCCCTTCATCAGCCGTATATCAAG
TGAGTAGTGGTGTGCTCGAGGTGCACCGGAAAAAAAGATGGGATATTAAC
ATAAAACATGGAACTACTAAAAGTAATAAAAGTGATGGGTAGAAAAAAAA
AAAAAAA

GH14903.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:07:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG32333-RB 1209 CG32333-RB 38..1130 1..1093 5465 100 Plus
CG32333.c 1105 CG32333.c 38..1037 1..1000 5000 100 Plus
CG32333.d 6226 CG32333.d 51..1049 1..999 4995 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 17:05:10
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 1287429..1287830 691..1092 1935 98.8 Plus
chr3L 24539361 chr3L 1284285..1284612 369..696 1610 99.4 Plus
chr3L 24539361 chr3L 1275438..1275643 1..206 955 97.6 Plus
chr3L 24539361 chr3L 1283125..1283287 207..369 815 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:53:12 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 17:05:08
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 1287930..1288332 691..1093 2015 100 Plus
3L 28110227 3L 1284787..1285114 369..696 1625 99.7 Plus
3L 28110227 3L 1275973..1276178 1..206 1030 100 Plus
3L 28110227 3L 1283650..1283812 207..369 815 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:38:28
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 1287930..1288332 691..1093 2015 100 Plus
3L 28103327 3L 1284787..1285114 369..696 1625 99.6 Plus
3L 28103327 3L 1275973..1276178 1..206 1030 100 Plus
3L 28103327 3L 1283650..1283812 207..369 815 100 Plus
Blast to na_te.dros performed on 2019-03-16 17:05:09 has no hits.

GH14903.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 17:06:34 Download gff for GH14903.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 1284286..1284608 370..692 99 -> Plus
chr3L 1287431..1287830 693..1092 98   Plus
chr3L 1275438..1275643 1..206 97 -> Plus
chr3L 1283125..1283287 207..369 100 -> Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:41:54 Download gff for GH14903.complete
Subject Subject Range Query Range Percent Splice Strand
CG32333-RB 1..711 293..1003 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:50:25 Download gff for GH14903.complete
Subject Subject Range Query Range Percent Splice Strand
CG32333-RB 1..711 293..1003 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 16:51:09 Download gff for GH14903.complete
Subject Subject Range Query Range Percent Splice Strand
CG32333-RB 1..711 293..1003 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:43:00 Download gff for GH14903.complete
Subject Subject Range Query Range Percent Splice Strand
CG32333-RB 1..711 293..1003 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:50:04 Download gff for GH14903.complete
Subject Subject Range Query Range Percent Splice Strand
CG32333-RB 1..711 293..1003 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:41:54 Download gff for GH14903.complete
Subject Subject Range Query Range Percent Splice Strand
CG32333-RB 1..1092 1..1092 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:50:24 Download gff for GH14903.complete
Subject Subject Range Query Range Percent Splice Strand
CG32333-RB 1..1092 1..1092 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:51:09 Download gff for GH14903.complete
Subject Subject Range Query Range Percent Splice Strand
CG32333-RB 18..1109 1..1092 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:43:00 Download gff for GH14903.complete
Subject Subject Range Query Range Percent Splice Strand
CG32333-RB 1..1092 1..1092 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:50:04 Download gff for GH14903.complete
Subject Subject Range Query Range Percent Splice Strand
CG32333-RB 18..1109 1..1092 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:06:34 Download gff for GH14903.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1275973..1276178 1..206 100 -> Plus
3L 1283650..1283812 207..369 100 -> Plus
3L 1284788..1285110 370..692 100 -> Plus
3L 1287932..1288331 693..1092 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:06:34 Download gff for GH14903.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1275973..1276178 1..206 100 -> Plus
3L 1283650..1283812 207..369 100 -> Plus
3L 1284788..1285110 370..692 100 -> Plus
3L 1287932..1288331 693..1092 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:06:34 Download gff for GH14903.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1275973..1276178 1..206 100 -> Plus
3L 1283650..1283812 207..369 100 -> Plus
3L 1284788..1285110 370..692 100 -> Plus
3L 1287932..1288331 693..1092 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:51:09 Download gff for GH14903.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 1275973..1276178 1..206 100 -> Plus
arm_3L 1283650..1283812 207..369 100 -> Plus
arm_3L 1284788..1285110 370..692 100 -> Plus
arm_3L 1287932..1288331 693..1092 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:15:21 Download gff for GH14903.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1284788..1285110 370..692 100 -> Plus
3L 1287932..1288331 693..1092 100   Plus
3L 1275973..1276178 1..206 100 -> Plus
3L 1283650..1283812 207..369 100 -> Plus

GH14903.pep Sequence

Translation from 292 to 1002

> GH14903.pep
MGDLQATIEFVVELHKFFNVDLFQRGLYQVRCGLRVSPRLLVQVETSIPE
ASGPGKQNGHANGANATDHGSSDSERGELSPGEVPRLHESPPGGSCSSAS
VINGSGASRIFQILYRNEEVPLRDIIHFRSHLLVDSRHLKESIERAEFSL
QLELWFGEQNGSSSLNGNGGGSGMGSFSGPASSALTLASTRNLQLNFHPG
RGLHYHLPVLFDYFHLAAISVGIHASLVALHQPYIK*

GH14903.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 23:05:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24447-PA 1516 GF24447-PA 1..234 1..235 975 85.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 23:05:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14774-PA 235 GG14774-PA 1..235 1..236 1176 96.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 23:05:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15446-PA 1550 GH15446-PA 1..230 1..235 817 70.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:11:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG32333-PB 236 CG32333-PB 1..236 1..236 1226 100 Plus
CG32333-PC 1499 CG32333-PC 1..236 1..236 1226 100 Plus
CG32333-PA 1489 CG32333-PA 1..235 1..235 1221 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 23:05:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13047-PA 1478 GI13047-PA 1..206 1..235 851 75.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 23:05:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16170-PA 930 GL16170-PA 1..209 1..235 911 79.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 23:05:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA28414-PA 210 GA28414-PA 1..210 1..236 908 79.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 23:05:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14394-PA 1470 GM14394-PA 1..216 1..235 1010 85.5 Plus
Dsec\GM14383-PA 219 GM14383-PA 117..219 134..236 529 98.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 23:05:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13602-PA 1271 GD13602-PA 1..233 1..235 1210 98.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 23:05:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12143-PA 1487 GJ12143-PA 1..213 1..235 860 75.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 23:05:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK21169-PA 1493 GK21169-PA 1..226 1..235 857 72.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 23:05:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21137-PA 235 GE21137-PA 1..235 1..236 1173 97.5 Plus

GH14903.hyp Sequence

Translation from 292 to 1002

> GH14903.hyp
MGDLQATIEFVVELHKFFNVDLFQRGLYQVRCGLRVSPRLLVQVETSIPE
ASGPGKQNGHANGANATDHGSSDSERGELSPGEVPRLHESPPGGSCSSAS
VINGSGASRIFQILYRNEEVPLRDIIHFRSHLLVDSRHLKESIERAEFSL
QLELWFGEQNGSSSLNGNGGGSGMGSFSGPASSALTLASTRNLQLNFHPG
RGLHYHLPVLFDYFHLAAISVGIHASLVALHQPYIK*

GH14903.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 07:58:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG32333-PB 236 CG32333-PB 1..236 1..236 1226 100 Plus
CG32333-PC 1499 CG32333-PC 1..236 1..236 1226 100 Plus
CG32333-PA 1489 CG32333-PA 1..235 1..235 1221 100 Plus