Clone GH14910 Report

Search the DGRC for GH14910

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:149
Well:10
Vector:pOT2
Associated Gene/TranscriptCG9008-RA
Protein status:GH14910.pep: gold
Preliminary Size:1962
Sequenced Size:1980

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG9008 2001-01-01 Release 2 assignment
CG9008 2001-07-04 Blastp of sequenced clone
CG9008 2003-01-01 Sim4 clustering to Release 3
CG9008 2008-04-29 Release 5.5 accounting
CG9008 2008-08-15 Release 5.9 accounting
CG9008 2008-12-18 5.12 accounting

Clone Sequence Records

GH14910.complete Sequence

1980 bp (1980 high quality bases) assembled on 2001-07-04

GenBank Submission: AY060305

> GH14910.complete
CAGAACATCGAAGGTCCGGGTCGTGACGCTTTTCGCCCGAACGTTTTTTG
CACGAGTTTTTTCCATACGTATTTGTTCATTGACAAAAACTCAAGCTGCG
CTCTGTGCGTGCGTGTGTATGTGTGTGTGCGAGTGAGTGTGTGTGTGCTG
GCGCGTCTGTGTGAGTGCGGTGCTTTGTGTGCAGAATAATTTTTGCAAAC
ATTATGTAAATGCGCAAATTAAAGTTCAATCGACGCCCGTTTTGAGTACG
AAACCAGATCGCCTTGCTTTAAGTGCCACGGAGCTACAGTTTCTTTTCGT
ACCCAATTTTTCAAAGATATACTCCCTCAGTAGGCAGGCACGCACACAAA
CATACACAGGATCTCAAACGATCCCCCGGATATACCTTTACCGTTAGGAA
AATTCAAAATGGCCACGACAGCGGCCGCAATGGCCGCAACGAGTGTAGTT
GTTCTGGATCGCGGAAACAATACAACCTGCACCATCAACTTGCACGGTGC
GACGGTCGTGTCCTGGCGGGTAAACAATCAGGAGCAGTTGTTTGTCAGCA
AACTAGCCTCATTCGATGGCAAGAAGGCGATACGCGGTGGGATTCCCTTT
GTCTTCCCTCAGTTCGGTGCGTGGTCCTTTGGGCCGCAGCATGGATTTGC
GAGGATTACCAGGTGGCACCTGGAGAGACCGCCAGACAGGCTTCACAATG
GCGATGTGGAGGCCATATTTTCGCTGATGGACAACGATTTTACGCGATCC
ATATGGAATTATCAGTTTCGCATCACTTATAGGCTGATCCTGCGCGAAAA
GGAGCTGCACTTCCACATCGGCGTCTACAATCCCAGCAAGGAGCTGAGCT
TCACCTTCAACATGCTGCTGCACACCTACCTAAAGGTGCCCGATGTGCGC
CGATGTCAGATCACCGGCCTCCAGGGCTGTCACTTCATCGACAAGACGCG
GGAGAATGCGCTCTATCAGGAGGGACGCGAGGTGGTCACCGTCAATGAGT
GGACCGACAGGATCTACCAGCACACGCCGCAGGAGCACGTCATCACAAAC
GTGGTGTCCGGCAGGAAGATGAGACTGCACAAGTACAATTTTCCCGATAC
GGTCATCTGGAATCCTTGGATCGATCGATCGCGTGAGATGAGTGACTTCG
GGGACGACGAGTTCCCCAACATGTTGTGCGTGGAGGCGGGCAATGTGACA
TCGCCGGTGATCCTGCTGCCGGGCACCGCTTTCGAGGCCAGCCAGATCCT
TCAGATTATCATCGAGGGCAATGTGAGTCGCAAGACCAAGCGGAATCGCT
AGCGTTTAAAGAATCGGAACCCGATGAGGTAAACCGATTCGCAACCATGT
CAAAGCGCACTTTTCCACAGATGAGCATCTGCGTCCGGAGTAGCTGGCGG
AGAATCAGGATGAACAGAAGGAGGGTTGTTCCCGCACGGTCTCTAGACTC
TAATCTATCTCTTAAGTAATCTAGCAATGTGTTGTGCAGAAAATGATAAT
GAATAGTACACTTAACTTTGTTTATCATCCTTAGTTTGTGCCTACTTAAA
GGAAATTGTGCATTGATAGTAGTTACATTAAGTTTTACGGATTAGGAAGT
GAAAGAGCTGGATCTTAAAATAATGGAACGATCCCCTAAAAAGTAGCATT
AAATCTTGGTTACCATACAAGATATCTGCGTCCATTGTGATGACCTCACT
TTTTGCTTCGGAATCTTACCTACACTCAGCAAAAATACGCGAAATAATGT
TATGAGCAATGGGCACTACTAGCTCTGGTCAGCACCCAATCAAGAAGTTG
TATACGATTGAATATAGATAACTTACATAATGTTTTAAAGCTAATATGTG
TAATATACTAAAAGCAATTATATGTACCAATTAATTAAATAATCAATGTA
ATTGTAACTTTAAAATCAAAAGGATGTACTTGAAACTTTGCAGATTACAA
ATATTTCACAGTAAAAAAAAAAAAAAAAAA

GH14910.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:36:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG9008-RA 2049 CG9008-RA 53..2015 1..1963 9815 100 Plus
CG9008-RB 2202 CG9008-RB 789..2202 547..1960 7070 100 Plus
CG9008.d 2230 CG9008.d 27..1280 1..1254 6270 100 Plus
CG9008.d 2230 CG9008.d 1484..2196 1251..1963 3565 100 Plus
CG9008-RB 2202 CG9008-RB 24..578 1..555 2745 99.6 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 17:05:15
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 13773052..13773763 1962..1251 3530 99.7 Minus
chr2L 23010047 chr2L 13778354..13778852 499..1 2495 100 Minus
chr2L 23010047 chr2L 13774183..13774520 1102..765 1690 100 Minus
chr2L 23010047 chr2L 13774588..13774746 766..608 795 100 Minus
chr2L 23010047 chr2L 13773967..13774119 1254..1102 765 100 Minus
chr2L 23010047 chr2L 13774810..13774871 607..546 310 100 Minus
chr2L 23010047 chr2L 13776483..13776535 548..496 265 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:53:13 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 17:05:13
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 13774339..13775051 1963..1251 3565 100 Minus
2L 23513712 2L 13779642..13780140 499..1 2495 100 Minus
2L 23513712 2L 13775471..13775808 1102..765 1690 100 Minus
2L 23513712 2L 13775876..13776034 766..608 795 100 Minus
2L 23513712 2L 13775255..13775407 1254..1102 765 100 Minus
2L 23513712 2L 13776098..13776159 607..546 310 100 Minus
2L 23513712 2L 13777771..13777823 548..496 265 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:57:42
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 13774339..13775051 1963..1251 3565 100 Minus
2L 23513712 2L 13779642..13780140 499..1 2495 100 Minus
2L 23513712 2L 13775471..13775808 1102..765 1690 100 Minus
2L 23513712 2L 13775876..13776034 766..608 795 100 Minus
2L 23513712 2L 13775255..13775407 1254..1102 765 100 Minus
2L 23513712 2L 13776098..13776159 607..546 310 100 Minus
2L 23513712 2L 13777771..13777823 548..496 265 100 Minus
Blast to na_te.dros performed 2019-03-16 17:05:14
Subject Length Description Subject Range Query Range Score Percent Strand
Stalker2 7672 Stalker2 STALKER2 7672bp 7120..7244 1798..1923 114 55.6 Plus

GH14910.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 17:06:37 Download gff for GH14910.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 13773967..13774118 1103..1254 100 <- Minus
chr2L 13773052..13773759 1255..1962 99 <- Minus
chr2L 13774183..13774520 765..1102 100 <- Minus
chr2L 13774590..13774746 608..764 100 <- Minus
chr2L 13774810..13774868 549..607 100 <- Minus
chr2L 13776483..13776534 497..548 100 <- Minus
chr2L 13778357..13778852 1..496 91   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:43:50 Download gff for GH14910.complete
Subject Subject Range Query Range Percent Splice Strand
CG9008-RA 1..894 409..1302 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:26:39 Download gff for GH14910.complete
Subject Subject Range Query Range Percent Splice Strand
CG9008-RA 1..894 409..1302 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 16:51:18 Download gff for GH14910.complete
Subject Subject Range Query Range Percent Splice Strand
CG9008-RA 1..894 409..1302 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:59:48 Download gff for GH14910.complete
Subject Subject Range Query Range Percent Splice Strand
CG9008-RA 1..894 409..1302 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:50:12 Download gff for GH14910.complete
Subject Subject Range Query Range Percent Splice Strand
CG9008-RA 1..894 409..1302 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:25:42 Download gff for GH14910.complete
Subject Subject Range Query Range Percent Splice Strand
CG9008-RA 24..1985 1..1962 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:26:39 Download gff for GH14910.complete
Subject Subject Range Query Range Percent Splice Strand
CG9008-RA 24..1985 1..1962 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:51:18 Download gff for GH14910.complete
Subject Subject Range Query Range Percent Splice Strand
CG9008-RA 26..1987 1..1962 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:59:48 Download gff for GH14910.complete
Subject Subject Range Query Range Percent Splice Strand
CG9008-RA 24..1985 1..1962 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:50:12 Download gff for GH14910.complete
Subject Subject Range Query Range Percent Splice Strand
CG9008-RA 26..1987 1..1962 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:06:37 Download gff for GH14910.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13774340..13775047 1255..1962 100 <- Minus
2L 13775255..13775406 1103..1254 100 <- Minus
2L 13775471..13775808 765..1102 100 <- Minus
2L 13775878..13776034 608..764 100 <- Minus
2L 13776098..13776156 549..607 100 <- Minus
2L 13777771..13777822 497..548 100 <- Minus
2L 13779645..13780140 1..496 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:06:37 Download gff for GH14910.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13774340..13775047 1255..1962 100 <- Minus
2L 13775255..13775406 1103..1254 100 <- Minus
2L 13775471..13775808 765..1102 100 <- Minus
2L 13775878..13776034 608..764 100 <- Minus
2L 13776098..13776156 549..607 100 <- Minus
2L 13777771..13777822 497..548 100 <- Minus
2L 13779645..13780140 1..496 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:06:37 Download gff for GH14910.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13774340..13775047 1255..1962 100 <- Minus
2L 13775255..13775406 1103..1254 100 <- Minus
2L 13775471..13775808 765..1102 100 <- Minus
2L 13775878..13776034 608..764 100 <- Minus
2L 13776098..13776156 549..607 100 <- Minus
2L 13777771..13777822 497..548 100 <- Minus
2L 13779645..13780140 1..496 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:51:18 Download gff for GH14910.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 13774340..13775047 1255..1962 100 <- Minus
arm_2L 13775255..13775406 1103..1254 100 <- Minus
arm_2L 13775471..13775808 765..1102 100 <- Minus
arm_2L 13775878..13776034 608..764 100 <- Minus
arm_2L 13776098..13776156 549..607 100 <- Minus
arm_2L 13777771..13777822 497..548 100 <- Minus
arm_2L 13779645..13780140 1..496 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:37:38 Download gff for GH14910.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13775878..13776034 608..764 100 <- Minus
2L 13776098..13776156 549..607 100 <- Minus
2L 13777771..13777822 497..548 100 <- Minus
2L 13774340..13775047 1255..1962 100 <- Minus
2L 13775255..13775406 1103..1254 100 <- Minus
2L 13775471..13775808 765..1102 100 <- Minus
2L 13779645..13780140 1..496 100   Minus

GH14910.pep Sequence

Translation from 408 to 1301

> GH14910.pep
MATTAAAMAATSVVVLDRGNNTTCTINLHGATVVSWRVNNQEQLFVSKLA
SFDGKKAIRGGIPFVFPQFGAWSFGPQHGFARITRWHLERPPDRLHNGDV
EAIFSLMDNDFTRSIWNYQFRITYRLILREKELHFHIGVYNPSKELSFTF
NMLLHTYLKVPDVRRCQITGLQGCHFIDKTRENALYQEGREVVTVNEWTD
RIYQHTPQEHVITNVVSGRKMRLHKYNFPDTVIWNPWIDRSREMSDFGDD
EFPNMLCVEAGNVTSPVILLPGTAFEASQILQIIIEGNVSRKTKRNR*

GH14910.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:56:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF21693-PA 297 GF21693-PA 1..297 1..297 1597 99 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:56:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10186-PA 297 GG10186-PA 1..297 1..297 1606 99.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:56:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10622-PA 272 GH10622-PA 16..272 16..297 1315 87.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:25:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG9008-PA 297 CG9008-PA 1..297 1..297 1590 100 Plus
CG9008-PE 289 CG9008-PE 1..283 1..283 1520 99.6 Plus
CG9008-PD 308 CG9008-PD 1..282 1..282 1517 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:56:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI19758-PA 297 GI19758-PA 16..297 16..297 1483 96.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:56:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL21096-PA 297 GL21096-PA 1..297 1..297 1588 98.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:56:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA21473-PA 297 GA21473-PA 1..297 1..297 1583 98.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:56:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15127-PA 297 GM15127-PA 1..297 1..297 1606 99.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:56:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22046-PA 297 GD22046-PA 1..297 1..297 1606 99.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:56:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18093-PA 297 GJ18093-PA 1..297 1..297 1559 96.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:56:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK18199-PA 297 GK18199-PA 1..297 1..297 1583 98 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:56:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE11470-PA 297 GE11470-PA 1..297 1..297 1607 100 Plus

GH14910.hyp Sequence

Translation from 408 to 1301

> GH14910.hyp
MATTAAAMAATSVVVLDRGNNTTCTINLHGATVVSWRVNNQEQLFVSKLA
SFDGKKAIRGGIPFVFPQFGAWSFGPQHGFARITRWHLERPPDRLHNGDV
EAIFSLMDNDFTRSIWNYQFRITYRLILREKELHFHIGVYNPSKELSFTF
NMLLHTYLKVPDVRRCQITGLQGCHFIDKTRENALYQEGREVVTVNEWTD
RIYQHTPQEHVITNVVSGRKMRLHKYNFPDTVIWNPWIDRSREMSDFGDD
EFPNMLCVEAGNVTSPVILLPGTAFEASQILQIIIEGNVSRKTKRNR*

GH14910.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 07:58:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG9008-PA 297 CG9008-PA 1..297 1..297 1590 100 Plus
CG9008-PE 289 CG9008-PE 1..283 1..283 1520 99.6 Plus
CG9008-PD 308 CG9008-PD 1..282 1..282 1517 100 Plus