Clone GH14974 Report

Search the DGRC for GH14974

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:149
Well:74
Vector:pOT2
Associated Gene/TranscriptCG10133-RA
Protein status:GH14974.pep: gold
Preliminary Size:1302
Sequenced Size:1197

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG10133 2001-01-01 Release 2 assignment
CG10133 2002-06-12 Blastp of sequenced clone
CG10133 2003-01-01 Sim4 clustering to Release 3
CG10133 2008-04-29 Release 5.5 accounting
CG10133 2008-08-15 Release 5.9 accounting
CG10133 2008-12-18 5.12 accounting

Clone Sequence Records

GH14974.complete Sequence

1197 bp (1197 high quality bases) assembled on 2002-06-12

GenBank Submission: AY122113

> GH14974.complete
CAGCACTTCAGTTTAACTTTCACTGAAAACCAGAACCCCACATTACACTG
CGCTGATAAGGTCCACTCTAGCGGAAAATGCGTTAGTGCGTGTTGTTTAC
CGGCATGTCCGAGGTCGAAAGAGCTCTGGATGTTCTGCTCCAGGAAGCGG
AGGAGCTGTGCATCGGGAGCAGCGTAGTGGAGCTGGACAGGATTCCAACC
GCCTTGGAGTTTTGTCGGGAATTCTACTCCAAAAACCAGCCGGTGGTCAT
TCGCAAGGCACTCAATTGGCCCGCGATTGGCAAATGGACGCCAAAGTACC
TGATCGAGGCTCTCGGGGACAGGAGCGTGGATGTGGCAATCACCCCGAAT
GGCTATGCCGACGGCTTGGCCACTCAAAATGGACAGGAGTACTTCGTTTT
GCCGCTGGAGACGAAAATGAAGCTGTCCGAGGTGGTCCGCCGCCTGGATG
ATCCCACTGGTGCTGTCCACTACATACAAAAGCAGAACTCTAACCTCAGT
GTGGACCTACCGGAACTGGCTGCTGATCTGCGGGTCAGTGATCTCGACTT
TGCGCAGCAGTCCTTTAACAAACCGCCTGATGCTGTTAACTTTTGGCTGG
GCGACGAGCGCGCCGTTACCTCCATGCACAAGGATCCATACGAGAACGTG
TACTGCGTGATATCCGGTCACAAGGACTTCGTTCTCATCCCGCCGCACCA
GCTTAGCTGCGTACCGCGAGGAATTTACCCTACAGGCGTTTACAAGACCT
CAGATAGTGGTCAGTTCTACATTGAACCGTTGAGGGATGAGGAAGGCAGC
GATCAGTTCACAGAATGGGTCAGCGTTGATCCCTTGTCACCCGACCTGGC
CAAATATCCGGAGTACGCCCGGGCCAAGCCTCTGAAAGTACGTGTTCACG
CGGGAGACATCCTATACCTGCCCAACTACTGGTTCCACCATGTGTCCCAA
AGCCACAAGTGCATCGCCGTGAACTTCTGGTACGATCTGGACTACGATAG
CCGGTACTGCTACTACCGCATGCTGGAGCAGATGACGTCCGCAAGGAGTG
GCTAATAGAATCCGGAGAAGTATTTATTCTCAGGGATTGTTAGGTGAATT
CAAAACCCTTCTTGTTTTCAGTGTATTTATATATATTATTGTTACATAAT
TTAGTGTTAAATAAAAAACTGATACCCAAAAAAAAAAAAAAAAAAAA

GH14974.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:48:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG10133-RA 1177 CG10133-RA 1..1177 1..1177 5885 100 Plus
CG10732-RA 5385 CG10732-RA 5323..5385 1181..1119 315 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 23:25:52
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 13439403..13440579 1177..1 5765 99.3 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:53:21 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 23:25:50
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 13449183..13450363 1181..1 5905 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:21:06
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 13442283..13443463 1181..1 5905 100 Minus
Blast to na_te.dros performed on 2019-03-16 23:25:50 has no hits.

GH14974.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 23:26:56 Download gff for GH14974.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 13439403..13440579 1..1177 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:43:57 Download gff for GH14974.complete
Subject Subject Range Query Range Percent Splice Strand
CG10133-RA 1..951 105..1055 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:23:23 Download gff for GH14974.complete
Subject Subject Range Query Range Percent Splice Strand
CG10133-RA 1..951 105..1055 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:42:55 Download gff for GH14974.complete
Subject Subject Range Query Range Percent Splice Strand
CG10133-RA 1..951 105..1055 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:14:05 Download gff for GH14974.complete
Subject Subject Range Query Range Percent Splice Strand
CG10133-RA 1..951 105..1055 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:49:49 Download gff for GH14974.complete
Subject Subject Range Query Range Percent Splice Strand
CG10133-RA 1..951 105..1055 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 20:50:28 Download gff for GH14974.complete
Subject Subject Range Query Range Percent Splice Strand
CG10133-RA 1..1177 1..1177 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:23:23 Download gff for GH14974.complete
Subject Subject Range Query Range Percent Splice Strand
CG10133-RA 1..1177 1..1177 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:42:55 Download gff for GH14974.complete
Subject Subject Range Query Range Percent Splice Strand
CG10133-RA 1..1097 81..1177 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:14:05 Download gff for GH14974.complete
Subject Subject Range Query Range Percent Splice Strand
CG10133-RA 1..1177 1..1177 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:49:49 Download gff for GH14974.complete
Subject Subject Range Query Range Percent Splice Strand
CG10133-RA 1..1097 81..1177 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:26:56 Download gff for GH14974.complete
Subject Subject Range Query Range Percent Splice Strand
3L 13449187..13450363 1..1177 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:26:56 Download gff for GH14974.complete
Subject Subject Range Query Range Percent Splice Strand
3L 13449187..13450363 1..1177 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:26:56 Download gff for GH14974.complete
Subject Subject Range Query Range Percent Splice Strand
3L 13449187..13450363 1..1177 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:42:55 Download gff for GH14974.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 13442287..13443463 1..1177 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:46:59 Download gff for GH14974.complete
Subject Subject Range Query Range Percent Splice Strand
3L 13442287..13443463 1..1177 100   Minus

GH14974.pep Sequence

Translation from 104 to 1054

> GH14974.pep
MSEVERALDVLLQEAEELCIGSSVVELDRIPTALEFCREFYSKNQPVVIR
KALNWPAIGKWTPKYLIEALGDRSVDVAITPNGYADGLATQNGQEYFVLP
LETKMKLSEVVRRLDDPTGAVHYIQKQNSNLSVDLPELAADLRVSDLDFA
QQSFNKPPDAVNFWLGDERAVTSMHKDPYENVYCVISGHKDFVLIPPHQL
SCVPRGIYPTGVYKTSDSGQFYIEPLRDEEGSDQFTEWVSVDPLSPDLAK
YPEYARAKPLKVRVHAGDILYLPNYWFHHVSQSHKCIAVNFWYDLDYDSR
YCYYRMLEQMTSARSG*

GH14974.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 05:25:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10950-PA 315 GF10950-PA 1..315 1..315 1463 81.9 Plus
Dana\GF25024-PA 397 GF25024-PA 167..397 31..294 214 24.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 05:25:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13765-PA 316 GG13765-PA 1..315 1..315 1637 95.2 Plus
Dere\GG14633-PA 401 GG14633-PA 169..401 31..294 192 24.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 05:25:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14673-PA 315 GH14673-PA 4..315 2..312 1290 71.8 Plus
Dgri\GH16027-PA 407 GH16027-PA 175..407 31..294 224 25.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:15:00
Subject Length Description Subject Range Query Range Score Percent Strand
JMJD7-PA 316 CG10133-PA 1..316 1..316 1691 100 Plus
JMJD5-PC 394 CG13902-PC 162..394 31..294 204 24.7 Plus
JMJD5-PB 401 CG13902-PB 169..401 31..294 204 24.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 05:25:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13783-PA 320 GI13783-PA 4..314 2..312 1280 72.4 Plus
Dmoj\GI12291-PA 399 GI12291-PA 170..399 31..294 221 25.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 05:25:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL25429-PA 321 GL25429-PA 1..314 1..314 1406 78 Plus
Dper\GL16337-PA 398 GL16337-PA 165..398 31..293 194 23.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 05:25:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10099-PA 321 GA10099-PA 1..314 1..314 1417 78.7 Plus
Dpse\GA12613-PA 398 GA12613-PA 165..398 31..293 197 23.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 05:25:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24589-PA 316 GM24589-PA 1..315 1..315 1672 98.1 Plus
Dsec\GM14248-PA 401 GM14248-PA 151..401 12..294 192 24.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 05:25:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12657-PA 316 GD12657-PA 1..315 1..315 1671 98.1 Plus
Dsim\GD13505-PA 401 GD13505-PA 169..401 31..294 189 23.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 05:25:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13585-PA 320 GJ13585-PA 4..313 2..311 1279 72.3 Plus
Dvir\GJ13228-PA 409 GJ13228-PA 178..409 31..294 224 26.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 05:25:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17091-PA 311 GK17091-PA 4..311 2..314 1339 73.8 Plus
Dwil\GK11877-PA 403 GK11877-PA 173..403 31..294 195 23 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 05:25:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20060-PA 316 GE20060-PA 1..314 1..314 1606 93.3 Plus
Dyak\GE16565-PA 401 GE16565-PA 169..401 31..294 194 26.1 Plus

GH14974.hyp Sequence

Translation from 104 to 1054

> GH14974.hyp
MSEVERALDVLLQEAEELCIGSSVVELDRIPTALEFCREFYSKNQPVVIR
KALNWPAIGKWTPKYLIEALGDRSVDVAITPNGYADGLATQNGQEYFVLP
LETKMKLSEVVRRLDDPTGAVHYIQKQNSNLSVDLPELAADLRVSDLDFA
QQSFNKPPDAVNFWLGDERAVTSMHKDPYENVYCVISGHKDFVLIPPHQL
SCVPRGIYPTGVYKTSDSGQFYIEPLRDEEGSDQFTEWVSVDPLSPDLAK
YPEYARAKPLKVRVHAGDILYLPNYWFHHVSQSHKCIAVNFWYDLDYDSR
YCYYRMLEQMTSARSG*

GH14974.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 07:59:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG10133-PA 316 CG10133-PA 1..316 1..316 1691 100 Plus
CG13902-PC 394 CG13902-PC 162..394 31..294 204 24.7 Plus
CG13902-PB 401 CG13902-PB 169..401 31..294 204 24.7 Plus