Clone GH15157 Report

Search the DGRC for GH15157

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:151
Well:57
Vector:pOT2
Associated Gene/TranscriptRcd-1-RA
Protein status:GH15157.pep: gold
Preliminary Size:1782
Sequenced Size:1630

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG14213 2002-01-01 Sim4 clustering to Release 2
CG14213 2002-05-18 Blastp of sequenced clone
CG14213 2003-01-01 Sim4 clustering to Release 3
CG14213 2008-04-29 Release 5.5 accounting
CG14213 2008-08-15 Release 5.9 accounting
CG14213 2008-12-18 5.12 accounting

Clone Sequence Records

GH15157.complete Sequence

1630 bp (1630 high quality bases) assembled on 2002-05-18

GenBank Submission: AY118785

> GH15157.complete
CCACACTGTTCGGCACACAACATAATCCTGGTTGTCGCCACTTGTTTTCG
ATCATTTTAGACTTAAACCAATGCAAAAGGAATTTCCTGCTAACGTTATC
GATAATCGCAATAGACGCCAAATCGCCAGTTTTACCTCTTCCTTTTTCGC
AGGCCCCGTTCCGTTCAGCGAATTCTCGCCCGAGCTAAGTCTATTGCAAG
CGTCCGGCTATAGAAATCGACGACAAATCGCTAGTTCCACCTCTTCCTTT
TCGCAGGCCCCATTCCGTTCAGCGAACTCTCGCCCGATCTAAGCGTCCGG
CGATAGGAATCCACCTCTTCCTTTTCGCAGGTCCCGTTCCGTTCAGCGAG
TTCTCGCCGACACTAAGTGCATTGCAAGCGTCCGGCGACAGTTCTTACCC
AGATCTTGTCAAGTTAACACGATGAGTGCTCAACCGAGTCCGCATATGAA
TCCTCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGACCGAGCAGG
AGAAGGTGTACCAGTGGATCAATGAGCTGGCCCATCCGGACACGCGTGAA
ACCGCTCTGCTCGAGCTAAGCAAGAAGCGTGAGACGGACCTGGCCCCCAT
GCTGTGGAACAGCTTCGGGACCGCCTGCGCCCTGTTGCAGGAGATTGTTA
ACATCTACCCATCGATAACGCCGCCCACTTTGACGGCCCACCAGTCGAAC
CGCGTGTGCAACGCCCTGGCGCTGCTGCAGTGCGTCGCCTCGCACCCGGA
GACTCGCACGGCCTTCCTGCAGGCCCAGATACCGCTGTACTTGTACCCTT
TCTTGTCGACCACGTCCAAGACCAGGCCCTTCGAGTACTTGCGCCTGACC
AGTTTGGGCGTGATTGGTGCTCTGGTCAAGACCGACGAACAGGAGGTGAT
CACCTTTCTGCTGACCACCGAGATCGTGCCCCTTTGTCTGAGCATCATGG
ACAGCGGATCGGAGCTGAGCAAGACTGTGGCCACTTTCATCATCCAGAAG
ATCCTGCTCGATGAGTCGGGTCTGTCGTACATCTGCCAGACCTACGAACG
CTTTTCGCACGTGGCCATCACCCTGGGCAAAATGGTCATCCAGCTGGCGA
AGGATCCATGCGCCCGGCTGTTGAAGCATGTGGTGCGCTGCTATCTGCGT
CTTTCGGACAATACACGCGCTCGCAAGGCCCTGGGACAGTGTCTGCCCGA
TCAGCTGCGTGACGGCACCTTTGCGCTGTGCCTGCAAGAGGACAAGTCGA
CCAAGCAGTGGCTGCAGATGCTGCTCAAGAACCTGGAACTCGGCGCCACT
CCGCAGCAGATCGGCATGTCGCCACTGGGCTCCTAGGGAGTGGAAGCGAC
AGCACACCCAGCACTATATTATCAATTCTAACGTCCAACCATCGATGATG
AATAATCCACGCTGTTAATTACATAGCTGCTCGACCGAATATACATAAAC
ATGCATACATACATACATACATATTTCATAAGCGTGCACGAGATTGCCTG
TGTCGACTTAAGCGGAGCTGTAATATACCTACATAAATTACAAATAAATT
AATGTTAATACTAAGATTGTCACTGACACCCAATAAAGAACCTCGAGCAG
ACGATACGATATAAAAAAAAAAAAAAAAAA

GH15157.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:04:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG14213.a 1565 CG14213.a 205..1563 257..1615 6795 100 Plus
CG14213-RB 1692 CG14213-RB 328..1686 257..1615 6795 100 Plus
CG14213.d 1875 CG14213.d 515..1873 257..1615 6795 100 Plus
CG14213.a 1565 CG14213.a 10..206 1..197 985 100 Plus
CG14213-RB 1692 CG14213-RB 140..328 1..189 945 100 Plus
CG14213.d 1875 CG14213.d 327..515 1..189 945 100 Plus
CG14213-RB 1692 CG14213-RB 249..329 215..294 245 88.8 Plus
CG14213.d 1875 CG14213.d 436..516 215..294 245 88.8 Plus
CG14213.a 1565 CG14213.a 119..198 215..293 240 88.7 Plus
CG14213.a 1565 CG14213.a 261..334 134..208 215 88 Plus
CG14213-RB 1692 CG14213-RB 384..457 134..208 215 88 Plus
CG14213.d 1875 CG14213.d 571..644 134..208 215 88 Plus
CG14213.a 1565 CG14213.a 258..306 236..284 185 91.8 Plus
CG14213-RB 1692 CG14213-RB 381..429 236..284 185 91.8 Plus
CG14213.d 1875 CG14213.d 568..616 236..284 185 91.8 Plus
CG14213.a 1565 CG14213.a 143..189 313..358 165 93.6 Plus
CG14213-RB 1692 CG14213-RB 273..319 313..358 165 93.6 Plus
CG14213.d 1875 CG14213.d 460..506 313..358 165 93.6 Plus
CG14213.a 1565 CG14213.a 205..241 153..189 140 91.8 Plus
CG14213-RB 1692 CG14213-RB 328..364 153..189 140 91.8 Plus
CG14213.d 1875 CG14213.d 515..551 153..189 140 91.8 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 17:14:20
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 19527680..19528186 1..507 2535 100 Plus
chrX 22417052 chrX 19529092..19529537 1167..1612 2230 100 Plus
chr2L 23010047 chr2L 9011984..9012787 1285..482 1890 82.3 Minus
chrX 22417052 chrX 19528235..19528611 504..880 1885 100 Plus
chrX 22417052 chrX 19528685..19528882 879..1076 990 100 Plus
chrX 22417052 chrX 19528938..19529030 1075..1167 465 100 Plus
chrX 22417052 chrX 19527789..19527868 215..293 230 88.8 Plus
chrX 22417052 chrX 19527894..19527972 110..189 230 88.8 Plus
chrX 22417052 chrX 19527823..19527887 322..386 205 87.7 Plus
chrX 22417052 chrX 19528001..19528065 144..208 205 87.7 Plus
chrX 22417052 chrX 19527915..19527963 310..358 185 91.8 Plus
chrX 22417052 chrX 19527989..19528037 236..284 185 91.8 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:53:40 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 17:14:18
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 19638889..19639395 1..507 2535 100 Plus
X 23542271 X 19640301..19640749 1167..1615 2245 100 Plus
X 23542271 X 19639444..19639820 504..880 1885 100 Plus
2L 23513712 2L 9013086..9013889 1285..482 1875 82.2 Minus
X 23542271 X 19639894..19640091 879..1076 990 100 Plus
X 23542271 X 19640147..19640239 1075..1167 465 100 Plus
X 23542271 X 19638998..19639077 215..293 230 88.8 Plus
X 23542271 X 19639103..19639181 110..189 230 88.8 Plus
X 23542271 X 19639032..19639096 322..386 205 87.7 Plus
X 23542271 X 19639210..19639274 144..208 205 87.7 Plus
X 23542271 X 19639124..19639172 310..358 185 91.8 Plus
X 23542271 X 19639198..19639246 236..284 185 91.8 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:35:50
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 19646987..19647493 1..507 2535 100 Plus
X 23527363 X 19648399..19648847 1167..1615 2245 100 Plus
X 23527363 X 19647542..19647918 504..880 1885 100 Plus
X 23527363 X 19647992..19648189 879..1076 990 100 Plus
2L 23513712 2L 9013487..9013786 884..585 885 86.3 Minus
2L 23513712 2L 9013086..9013452 1285..919 815 81.4 Minus
X 23527363 X 19648245..19648337 1075..1167 465 100 Plus
2L 23513712 2L 9013795..9013889 576..482 295 87.3 Minus
Blast to na_te.dros performed on 2019-03-16 17:14:18 has no hits.

GH15157.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 17:15:27 Download gff for GH15157.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 19527680..19528184 1..505 100 -> Plus
chrX 19528237..19528611 506..880 100 -> Plus
chrX 19528687..19528881 881..1075 100 -> Plus
chrX 19528939..19529030 1076..1167 100 -> Plus
chrX 19529093..19529537 1168..1612 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:44:10 Download gff for GH15157.complete
Subject Subject Range Query Range Percent Splice Strand
CG14213-RA 1..915 422..1336 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:46:18 Download gff for GH15157.complete
Subject Subject Range Query Range Percent Splice Strand
CG14213-RA 1..915 422..1336 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 16:53:25 Download gff for GH15157.complete
Subject Subject Range Query Range Percent Splice Strand
Rcd-1-RB 1..915 422..1336 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:38:34 Download gff for GH15157.complete
Subject Subject Range Query Range Percent Splice Strand
CG14213-RA 1..915 422..1336 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:54:38 Download gff for GH15157.complete
Subject Subject Range Query Range Percent Splice Strand
Rcd-1-RB 1..915 422..1336 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 21:21:53 Download gff for GH15157.complete
Subject Subject Range Query Range Percent Splice Strand
CG14213-RA 1..1612 1..1612 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:46:18 Download gff for GH15157.complete
Subject Subject Range Query Range Percent Splice Strand
CG14213-RA 1..1612 1..1612 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:53:25 Download gff for GH15157.complete
Subject Subject Range Query Range Percent Splice Strand
Rcd-1-RA 1..1612 1..1612 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:38:34 Download gff for GH15157.complete
Subject Subject Range Query Range Percent Splice Strand
CG14213-RA 1..1612 1..1612 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:54:38 Download gff for GH15157.complete
Subject Subject Range Query Range Percent Splice Strand
Rcd-1-RA 1..1612 1..1612 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:15:27 Download gff for GH15157.complete
Subject Subject Range Query Range Percent Splice Strand
X 19638889..19639393 1..505 100 -> Plus
X 19639446..19639820 506..880 100 -> Plus
X 19639896..19640090 881..1075 100 -> Plus
X 19640148..19640239 1076..1167 100 -> Plus
X 19640302..19640746 1168..1612 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:15:27 Download gff for GH15157.complete
Subject Subject Range Query Range Percent Splice Strand
X 19638889..19639393 1..505 100 -> Plus
X 19639446..19639820 506..880 100 -> Plus
X 19639896..19640090 881..1075 100 -> Plus
X 19640148..19640239 1076..1167 100 -> Plus
X 19640302..19640746 1168..1612 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:15:27 Download gff for GH15157.complete
Subject Subject Range Query Range Percent Splice Strand
X 19638889..19639393 1..505 100 -> Plus
X 19639446..19639820 506..880 100 -> Plus
X 19639896..19640090 881..1075 100 -> Plus
X 19640148..19640239 1076..1167 100 -> Plus
X 19640302..19640746 1168..1612 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:53:25 Download gff for GH15157.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 19532922..19533426 1..505 100 -> Plus
arm_X 19533479..19533853 506..880 100 -> Plus
arm_X 19533929..19534123 881..1075 100 -> Plus
arm_X 19534181..19534272 1076..1167 100 -> Plus
arm_X 19534335..19534779 1168..1612 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:10:56 Download gff for GH15157.complete
Subject Subject Range Query Range Percent Splice Strand
X 19646987..19647491 1..505 100 -> Plus
X 19647544..19647918 506..880 100 -> Plus
X 19647994..19648188 881..1075 100 -> Plus
X 19648246..19648337 1076..1167 100 -> Plus
X 19648400..19648844 1168..1612 100   Plus

GH15157.pep Sequence

Translation from 421 to 1335

> GH15157.pep
MSAQPSPHMNPQQQQQQQQQQQQTEQEKVYQWINELAHPDTRETALLELS
KKRETDLAPMLWNSFGTACALLQEIVNIYPSITPPTLTAHQSNRVCNALA
LLQCVASHPETRTAFLQAQIPLYLYPFLSTTSKTRPFEYLRLTSLGVIGA
LVKTDEQEVITFLLTTEIVPLCLSIMDSGSELSKTVATFIIQKILLDESG
LSYICQTYERFSHVAITLGKMVIQLAKDPCARLLKHVVRCYLRLSDNTRA
RKALGQCLPDQLRDGTFALCLQEDKSTKQWLQMLLKNLELGATPQQIGMS
PLGS*

GH15157.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 22:00:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20275-PA 304 GF20275-PA 1..304 1..304 1576 97.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 22:00:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG19241-PA 297 GG19241-PA 1..297 1..304 1537 96.4 Plus
Dere\GG11840-PA 299 GG11840-PA 9..258 21..267 496 40.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 22:00:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24151-PA 304 GH24151-PA 1..303 1..303 1416 91.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:06:00
Subject Length Description Subject Range Query Range Score Percent Strand
Rcd-1-PA 304 CG14213-PA 1..304 1..304 1563 100 Plus
Rcd-1-PB 304 CG14213-PB 1..304 1..304 1563 100 Plus
Rcd-1-PC 301 CG14213-PC 1..301 1..304 1533 99 Plus
Rcd-1r-PA 290 CG9573-PA 1..289 1..304 976 65.5 Plus
CG2053-PB 298 CG2053-PB 9..258 21..267 469 40 Plus
CG2053-PA 298 CG2053-PA 9..258 21..267 469 40 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 22:00:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI21711-PA 306 GI21711-PA 1..306 1..304 1449 92.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 22:00:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL27101-PA 296 GL27101-PA 1..296 1..304 1524 95.7 Plus
Dper\GL23452-PA 331 GL23452-PA 12..259 24..269 465 37.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 22:00:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA12828-PA 296 GA12828-PA 1..296 1..304 1524 95.7 Plus
Dpse\GA27260-PA 302 GA27260-PA 12..259 24..269 467 37.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 22:00:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22976-PA 299 GM22976-PA 1..299 1..304 1549 96.7 Plus
Dsec\GM12572-PA 297 GM12572-PA 1..294 1..301 990 64 Plus
Dsec\GM16460-PA 298 GM16460-PA 9..258 21..267 476 39.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 22:00:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22367-PA 297 GD22367-PA 1..280 1..289 949 61.9 Plus
Dsim\GD21611-PA 298 GD21611-PA 9..258 21..267 482 40 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 22:00:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ15574-PA 302 GJ15574-PA 1..302 1..304 1453 90.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 22:00:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK16372-PA 304 GK16372-PA 1..304 1..304 1478 93.9 Plus
Dwil\GK12164-PA 295 GK12164-PA 3..252 20..267 493 39.6 Plus
Dwil\GK13072-PA 269 GK13072-PA 6..254 21..263 399 35.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 22:00:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15860-PA 298 GE15860-PA 1..298 1..304 1547 97 Plus
Dyak\GE10974-PA 299 GE10974-PA 9..258 21..267 495 40.4 Plus

GH15157.hyp Sequence

Translation from 421 to 1335

> GH15157.hyp
MSAQPSPHMNPQQQQQQQQQQQQTEQEKVYQWINELAHPDTRETALLELS
KKRETDLAPMLWNSFGTACALLQEIVNIYPSITPPTLTAHQSNRVCNALA
LLQCVASHPETRTAFLQAQIPLYLYPFLSTTSKTRPFEYLRLTSLGVIGA
LVKTDEQEVITFLLTTEIVPLCLSIMDSGSELSKTVATFIIQKILLDESG
LSYICQTYERFSHVAITLGKMVIQLAKDPCARLLKHVVRCYLRLSDNTRA
RKALGQCLPDQLRDGTFALCLQEDKSTKQWLQMLLKNLELGATPQQIGMS
PLGS*

GH15157.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 07:59:34
Subject Length Description Subject Range Query Range Score Percent Strand
Rcd-1-PA 304 CG14213-PA 1..304 1..304 1563 100 Plus
Rcd-1-PB 304 CG14213-PB 1..304 1..304 1563 100 Plus
Rcd-1-PC 301 CG14213-PC 1..301 1..304 1533 99 Plus
Rcd-1r-PA 290 CG9573-PA 1..289 1..304 976 65.5 Plus
CG2053-PB 298 CG2053-PB 9..258 21..267 469 40 Plus