BDGP Sequence Production Resources |
Search the DGRC for GH15157
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 151 |
Well: | 57 |
Vector: | pOT2 |
Associated Gene/Transcript | Rcd-1-RA |
Protein status: | GH15157.pep: gold |
Preliminary Size: | 1782 |
Sequenced Size: | 1630 |
Gene | Date | Evidence |
---|---|---|
CG14213 | 2002-01-01 | Sim4 clustering to Release 2 |
CG14213 | 2002-05-18 | Blastp of sequenced clone |
CG14213 | 2003-01-01 | Sim4 clustering to Release 3 |
CG14213 | 2008-04-29 | Release 5.5 accounting |
CG14213 | 2008-08-15 | Release 5.9 accounting |
CG14213 | 2008-12-18 | 5.12 accounting |
1630 bp (1630 high quality bases) assembled on 2002-05-18
GenBank Submission: AY118785
> GH15157.complete CCACACTGTTCGGCACACAACATAATCCTGGTTGTCGCCACTTGTTTTCG ATCATTTTAGACTTAAACCAATGCAAAAGGAATTTCCTGCTAACGTTATC GATAATCGCAATAGACGCCAAATCGCCAGTTTTACCTCTTCCTTTTTCGC AGGCCCCGTTCCGTTCAGCGAATTCTCGCCCGAGCTAAGTCTATTGCAAG CGTCCGGCTATAGAAATCGACGACAAATCGCTAGTTCCACCTCTTCCTTT TCGCAGGCCCCATTCCGTTCAGCGAACTCTCGCCCGATCTAAGCGTCCGG CGATAGGAATCCACCTCTTCCTTTTCGCAGGTCCCGTTCCGTTCAGCGAG TTCTCGCCGACACTAAGTGCATTGCAAGCGTCCGGCGACAGTTCTTACCC AGATCTTGTCAAGTTAACACGATGAGTGCTCAACCGAGTCCGCATATGAA TCCTCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGACCGAGCAGG AGAAGGTGTACCAGTGGATCAATGAGCTGGCCCATCCGGACACGCGTGAA ACCGCTCTGCTCGAGCTAAGCAAGAAGCGTGAGACGGACCTGGCCCCCAT GCTGTGGAACAGCTTCGGGACCGCCTGCGCCCTGTTGCAGGAGATTGTTA ACATCTACCCATCGATAACGCCGCCCACTTTGACGGCCCACCAGTCGAAC CGCGTGTGCAACGCCCTGGCGCTGCTGCAGTGCGTCGCCTCGCACCCGGA GACTCGCACGGCCTTCCTGCAGGCCCAGATACCGCTGTACTTGTACCCTT TCTTGTCGACCACGTCCAAGACCAGGCCCTTCGAGTACTTGCGCCTGACC AGTTTGGGCGTGATTGGTGCTCTGGTCAAGACCGACGAACAGGAGGTGAT CACCTTTCTGCTGACCACCGAGATCGTGCCCCTTTGTCTGAGCATCATGG ACAGCGGATCGGAGCTGAGCAAGACTGTGGCCACTTTCATCATCCAGAAG ATCCTGCTCGATGAGTCGGGTCTGTCGTACATCTGCCAGACCTACGAACG CTTTTCGCACGTGGCCATCACCCTGGGCAAAATGGTCATCCAGCTGGCGA AGGATCCATGCGCCCGGCTGTTGAAGCATGTGGTGCGCTGCTATCTGCGT CTTTCGGACAATACACGCGCTCGCAAGGCCCTGGGACAGTGTCTGCCCGA TCAGCTGCGTGACGGCACCTTTGCGCTGTGCCTGCAAGAGGACAAGTCGA CCAAGCAGTGGCTGCAGATGCTGCTCAAGAACCTGGAACTCGGCGCCACT CCGCAGCAGATCGGCATGTCGCCACTGGGCTCCTAGGGAGTGGAAGCGAC AGCACACCCAGCACTATATTATCAATTCTAACGTCCAACCATCGATGATG AATAATCCACGCTGTTAATTACATAGCTGCTCGACCGAATATACATAAAC ATGCATACATACATACATACATATTTCATAAGCGTGCACGAGATTGCCTG TGTCGACTTAAGCGGAGCTGTAATATACCTACATAAATTACAAATAAATT AATGTTAATACTAAGATTGTCACTGACACCCAATAAAGAACCTCGAGCAG ACGATACGATATAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14213.a | 1565 | CG14213.a | 205..1563 | 257..1615 | 6795 | 100 | Plus |
CG14213-RB | 1692 | CG14213-RB | 328..1686 | 257..1615 | 6795 | 100 | Plus |
CG14213.d | 1875 | CG14213.d | 515..1873 | 257..1615 | 6795 | 100 | Plus |
CG14213.a | 1565 | CG14213.a | 10..206 | 1..197 | 985 | 100 | Plus |
CG14213-RB | 1692 | CG14213-RB | 140..328 | 1..189 | 945 | 100 | Plus |
CG14213.d | 1875 | CG14213.d | 327..515 | 1..189 | 945 | 100 | Plus |
CG14213-RB | 1692 | CG14213-RB | 249..329 | 215..294 | 245 | 88.8 | Plus |
CG14213.d | 1875 | CG14213.d | 436..516 | 215..294 | 245 | 88.8 | Plus |
CG14213.a | 1565 | CG14213.a | 119..198 | 215..293 | 240 | 88.7 | Plus |
CG14213.a | 1565 | CG14213.a | 261..334 | 134..208 | 215 | 88 | Plus |
CG14213-RB | 1692 | CG14213-RB | 384..457 | 134..208 | 215 | 88 | Plus |
CG14213.d | 1875 | CG14213.d | 571..644 | 134..208 | 215 | 88 | Plus |
CG14213.a | 1565 | CG14213.a | 258..306 | 236..284 | 185 | 91.8 | Plus |
CG14213-RB | 1692 | CG14213-RB | 381..429 | 236..284 | 185 | 91.8 | Plus |
CG14213.d | 1875 | CG14213.d | 568..616 | 236..284 | 185 | 91.8 | Plus |
CG14213.a | 1565 | CG14213.a | 143..189 | 313..358 | 165 | 93.6 | Plus |
CG14213-RB | 1692 | CG14213-RB | 273..319 | 313..358 | 165 | 93.6 | Plus |
CG14213.d | 1875 | CG14213.d | 460..506 | 313..358 | 165 | 93.6 | Plus |
CG14213.a | 1565 | CG14213.a | 205..241 | 153..189 | 140 | 91.8 | Plus |
CG14213-RB | 1692 | CG14213-RB | 328..364 | 153..189 | 140 | 91.8 | Plus |
CG14213.d | 1875 | CG14213.d | 515..551 | 153..189 | 140 | 91.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 19527680..19528186 | 1..507 | 2535 | 100 | Plus |
chrX | 22417052 | chrX | 19529092..19529537 | 1167..1612 | 2230 | 100 | Plus |
chr2L | 23010047 | chr2L | 9011984..9012787 | 1285..482 | 1890 | 82.3 | Minus |
chrX | 22417052 | chrX | 19528235..19528611 | 504..880 | 1885 | 100 | Plus |
chrX | 22417052 | chrX | 19528685..19528882 | 879..1076 | 990 | 100 | Plus |
chrX | 22417052 | chrX | 19528938..19529030 | 1075..1167 | 465 | 100 | Plus |
chrX | 22417052 | chrX | 19527789..19527868 | 215..293 | 230 | 88.8 | Plus |
chrX | 22417052 | chrX | 19527894..19527972 | 110..189 | 230 | 88.8 | Plus |
chrX | 22417052 | chrX | 19527823..19527887 | 322..386 | 205 | 87.7 | Plus |
chrX | 22417052 | chrX | 19528001..19528065 | 144..208 | 205 | 87.7 | Plus |
chrX | 22417052 | chrX | 19527915..19527963 | 310..358 | 185 | 91.8 | Plus |
chrX | 22417052 | chrX | 19527989..19528037 | 236..284 | 185 | 91.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 19638889..19639395 | 1..507 | 2535 | 100 | Plus |
X | 23542271 | X | 19640301..19640749 | 1167..1615 | 2245 | 100 | Plus |
X | 23542271 | X | 19639444..19639820 | 504..880 | 1885 | 100 | Plus |
2L | 23513712 | 2L | 9013086..9013889 | 1285..482 | 1875 | 82.2 | Minus |
X | 23542271 | X | 19639894..19640091 | 879..1076 | 990 | 100 | Plus |
X | 23542271 | X | 19640147..19640239 | 1075..1167 | 465 | 100 | Plus |
X | 23542271 | X | 19638998..19639077 | 215..293 | 230 | 88.8 | Plus |
X | 23542271 | X | 19639103..19639181 | 110..189 | 230 | 88.8 | Plus |
X | 23542271 | X | 19639032..19639096 | 322..386 | 205 | 87.7 | Plus |
X | 23542271 | X | 19639210..19639274 | 144..208 | 205 | 87.7 | Plus |
X | 23542271 | X | 19639124..19639172 | 310..358 | 185 | 91.8 | Plus |
X | 23542271 | X | 19639198..19639246 | 236..284 | 185 | 91.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 19646987..19647493 | 1..507 | 2535 | 100 | Plus |
X | 23527363 | X | 19648399..19648847 | 1167..1615 | 2245 | 100 | Plus |
X | 23527363 | X | 19647542..19647918 | 504..880 | 1885 | 100 | Plus |
X | 23527363 | X | 19647992..19648189 | 879..1076 | 990 | 100 | Plus |
2L | 23513712 | 2L | 9013487..9013786 | 884..585 | 885 | 86.3 | Minus |
2L | 23513712 | 2L | 9013086..9013452 | 1285..919 | 815 | 81.4 | Minus |
X | 23527363 | X | 19648245..19648337 | 1075..1167 | 465 | 100 | Plus |
2L | 23513712 | 2L | 9013795..9013889 | 576..482 | 295 | 87.3 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 19527680..19528184 | 1..505 | 100 | -> | Plus |
chrX | 19528237..19528611 | 506..880 | 100 | -> | Plus |
chrX | 19528687..19528881 | 881..1075 | 100 | -> | Plus |
chrX | 19528939..19529030 | 1076..1167 | 100 | -> | Plus |
chrX | 19529093..19529537 | 1168..1612 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14213-RA | 1..915 | 422..1336 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14213-RA | 1..915 | 422..1336 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rcd-1-RB | 1..915 | 422..1336 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14213-RA | 1..915 | 422..1336 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rcd-1-RB | 1..915 | 422..1336 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14213-RA | 1..1612 | 1..1612 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14213-RA | 1..1612 | 1..1612 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rcd-1-RA | 1..1612 | 1..1612 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14213-RA | 1..1612 | 1..1612 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rcd-1-RA | 1..1612 | 1..1612 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19638889..19639393 | 1..505 | 100 | -> | Plus |
X | 19639446..19639820 | 506..880 | 100 | -> | Plus |
X | 19639896..19640090 | 881..1075 | 100 | -> | Plus |
X | 19640148..19640239 | 1076..1167 | 100 | -> | Plus |
X | 19640302..19640746 | 1168..1612 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19638889..19639393 | 1..505 | 100 | -> | Plus |
X | 19639446..19639820 | 506..880 | 100 | -> | Plus |
X | 19639896..19640090 | 881..1075 | 100 | -> | Plus |
X | 19640148..19640239 | 1076..1167 | 100 | -> | Plus |
X | 19640302..19640746 | 1168..1612 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19638889..19639393 | 1..505 | 100 | -> | Plus |
X | 19639446..19639820 | 506..880 | 100 | -> | Plus |
X | 19639896..19640090 | 881..1075 | 100 | -> | Plus |
X | 19640148..19640239 | 1076..1167 | 100 | -> | Plus |
X | 19640302..19640746 | 1168..1612 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 19532922..19533426 | 1..505 | 100 | -> | Plus |
arm_X | 19533479..19533853 | 506..880 | 100 | -> | Plus |
arm_X | 19533929..19534123 | 881..1075 | 100 | -> | Plus |
arm_X | 19534181..19534272 | 1076..1167 | 100 | -> | Plus |
arm_X | 19534335..19534779 | 1168..1612 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19646987..19647491 | 1..505 | 100 | -> | Plus |
X | 19647544..19647918 | 506..880 | 100 | -> | Plus |
X | 19647994..19648188 | 881..1075 | 100 | -> | Plus |
X | 19648246..19648337 | 1076..1167 | 100 | -> | Plus |
X | 19648400..19648844 | 1168..1612 | 100 | Plus |
Translation from 421 to 1335
> GH15157.pep MSAQPSPHMNPQQQQQQQQQQQQTEQEKVYQWINELAHPDTRETALLELS KKRETDLAPMLWNSFGTACALLQEIVNIYPSITPPTLTAHQSNRVCNALA LLQCVASHPETRTAFLQAQIPLYLYPFLSTTSKTRPFEYLRLTSLGVIGA LVKTDEQEVITFLLTTEIVPLCLSIMDSGSELSKTVATFIIQKILLDESG LSYICQTYERFSHVAITLGKMVIQLAKDPCARLLKHVVRCYLRLSDNTRA RKALGQCLPDQLRDGTFALCLQEDKSTKQWLQMLLKNLELGATPQQIGMS PLGS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20275-PA | 304 | GF20275-PA | 1..304 | 1..304 | 1576 | 97.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19241-PA | 297 | GG19241-PA | 1..297 | 1..304 | 1537 | 96.4 | Plus |
Dere\GG11840-PA | 299 | GG11840-PA | 9..258 | 21..267 | 496 | 40.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24151-PA | 304 | GH24151-PA | 1..303 | 1..303 | 1416 | 91.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Rcd-1-PA | 304 | CG14213-PA | 1..304 | 1..304 | 1563 | 100 | Plus |
Rcd-1-PB | 304 | CG14213-PB | 1..304 | 1..304 | 1563 | 100 | Plus |
Rcd-1-PC | 301 | CG14213-PC | 1..301 | 1..304 | 1533 | 99 | Plus |
Rcd-1r-PA | 290 | CG9573-PA | 1..289 | 1..304 | 976 | 65.5 | Plus |
CG2053-PB | 298 | CG2053-PB | 9..258 | 21..267 | 469 | 40 | Plus |
CG2053-PA | 298 | CG2053-PA | 9..258 | 21..267 | 469 | 40 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21711-PA | 306 | GI21711-PA | 1..306 | 1..304 | 1449 | 92.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL27101-PA | 296 | GL27101-PA | 1..296 | 1..304 | 1524 | 95.7 | Plus |
Dper\GL23452-PA | 331 | GL23452-PA | 12..259 | 24..269 | 465 | 37.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12828-PA | 296 | GA12828-PA | 1..296 | 1..304 | 1524 | 95.7 | Plus |
Dpse\GA27260-PA | 302 | GA27260-PA | 12..259 | 24..269 | 467 | 37.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22976-PA | 299 | GM22976-PA | 1..299 | 1..304 | 1549 | 96.7 | Plus |
Dsec\GM12572-PA | 297 | GM12572-PA | 1..294 | 1..301 | 990 | 64 | Plus |
Dsec\GM16460-PA | 298 | GM16460-PA | 9..258 | 21..267 | 476 | 39.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22367-PA | 297 | GD22367-PA | 1..280 | 1..289 | 949 | 61.9 | Plus |
Dsim\GD21611-PA | 298 | GD21611-PA | 9..258 | 21..267 | 482 | 40 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15574-PA | 302 | GJ15574-PA | 1..302 | 1..304 | 1453 | 90.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16372-PA | 304 | GK16372-PA | 1..304 | 1..304 | 1478 | 93.9 | Plus |
Dwil\GK12164-PA | 295 | GK12164-PA | 3..252 | 20..267 | 493 | 39.6 | Plus |
Dwil\GK13072-PA | 269 | GK13072-PA | 6..254 | 21..263 | 399 | 35.3 | Plus |
Translation from 421 to 1335
> GH15157.hyp MSAQPSPHMNPQQQQQQQQQQQQTEQEKVYQWINELAHPDTRETALLELS KKRETDLAPMLWNSFGTACALLQEIVNIYPSITPPTLTAHQSNRVCNALA LLQCVASHPETRTAFLQAQIPLYLYPFLSTTSKTRPFEYLRLTSLGVIGA LVKTDEQEVITFLLTTEIVPLCLSIMDSGSELSKTVATFIIQKILLDESG LSYICQTYERFSHVAITLGKMVIQLAKDPCARLLKHVVRCYLRLSDNTRA RKALGQCLPDQLRDGTFALCLQEDKSTKQWLQMLLKNLELGATPQQIGMS PLGS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Rcd-1-PA | 304 | CG14213-PA | 1..304 | 1..304 | 1563 | 100 | Plus |
Rcd-1-PB | 304 | CG14213-PB | 1..304 | 1..304 | 1563 | 100 | Plus |
Rcd-1-PC | 301 | CG14213-PC | 1..301 | 1..304 | 1533 | 99 | Plus |
Rcd-1r-PA | 290 | CG9573-PA | 1..289 | 1..304 | 976 | 65.5 | Plus |
CG2053-PB | 298 | CG2053-PB | 9..258 | 21..267 | 469 | 40 | Plus |