GH15189.complete Sequence
810 bp (810 high quality bases) assembled on 2002-05-18
GenBank Submission: AY118786
> GH15189.complete
CTAGAAAGCAGGCAGAGATTTGTTTACTTCTGCGAAGATTAATTCAGCAG
AAGCACGGAAATACGGATCCTTAATCATGACTAGATATTCACGTAAAAAC
CAGGCCTTGCTTCAACTCCCCGTTCCTTGGAGAACAGGAACGTAAAACCG
GCCTATAAGGTTTCCTAGGGCTTGGAACGGAGGGGGAAAGTGATACTTCA
AACGTGTCAAGGAGTAGGGTAGAACGCTCTTGATGTGTTCAGCGCAGAGC
ACCAATCAGTAGCGATCAGCAGCAACGTAAGCGAAACGGACCATCGGACT
CAAATGGGAAGAATCACAAACGGAGATGCAGATGCATCTGTCTATTTAGG
CCTGGAAGTACAAGGAGTTGATCCAGGACAACCCGACAATGGCCCTGGTA
GACGAGCGCCACGCAGACGGCTGCTTGCTCTTCGAAAAGTGGTGTCAGAT
CGAGGCGAGGCTGGCTCGCATTGTGGCGGATAGACGGGCGGCGGTGCCTC
AAGGACCTCACCCGTTGCTTGACTCCTCATTTGTTATTCGAGGACACCGG
ATGATCAGGTGCTAGGACGGCTTCTCTAAGATCTTCCTAGAGGATTGCAT
TGAGCAATTAGCCGACGCATGGGATGGACTATGCATTAAGCTTGTTCACG
CCAGCGAAATACCCAGTTCAAGTCAAGCGGCCCGTTTTGTTCATCAAGTA
AGTAAGAGCTTTTCCTGTTTGTACAAAGACAATACAGTTTATGAAATAAA
TAAACGATTGAAGGAACGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAA
GH15189.complete Blast Records
Blast to MB8.fasta performed on 2010-07-15 19:04:24 has no hits.
Blast to d_melanogaster_OreR.fa performed 2019-03-16 19:36:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3R | 27901430 | chr3R | 25681528..25682131 | 768..160 | 2845 | 98.2 | Minus |
chr3R | 27901430 | chr3R | 25682186..25682345 | 160..1 | 785 | 99.4 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed 2010-04-22 16:53:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CR31032-RA | 770 | CR31032-RA | 1..770 | 1..770 | 3850 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 19:36:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 29859041..29859651 | 770..160 | 3055 | 100 | Minus |
3R | 32079331 | 3R | 29859706..29859865 | 160..1 | 800 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:35:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 31820162 | 3R | 29599872..29600482 | 770..160 | 3055 | 100 | Minus |
3R | 31820162 | 3R | 29600537..29600696 | 160..1 | 800 | 100 | Minus |
3R | 31820162 | 3R | 29599143..29599187 | 421..377 | 150 | 88.8 | Minus |
Blast to na_te.dros performed on 2019-03-16 19:36:30 has no hits.
GH15189.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 19:37:08 Download gff for
GH15189.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3R | 25681528..25682130 | 161..768 | 98 | <- | Minus |
chr3R | 25682186..25682345 | 1..160 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.9.fasta performed on 2008-07-21 18:38:35 has no hits.
Sim4 to dmel-all-all_noncoding-r5.12.fasta performed 2010-04-22 16:53:44 Download gff for
GH15189.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CR31032-RA | 1..768 | 1..768 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed on 2008-07-21 18:38:35 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:37:08 Download gff for
GH15189.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 29859043..29859650 | 161..768 | 100 | <- | Minus |
3R | 29859706..29859865 | 1..160 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:37:08 Download gff for
GH15189.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 29859043..29859650 | 161..768 | 100 | <- | Minus |
3R | 29859706..29859865 | 1..160 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:37:08 Download gff for
GH15189.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 29859043..29859650 | 161..768 | 100 | <- | Minus |
3R | 29859706..29859865 | 1..160 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:44:09 Download gff for
GH15189.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 25684765..25685372 | 161..768 | 100 | <- | Minus |
arm_3R | 25685428..25685587 | 1..160 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:44:09 Download gff for
GH15189.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 25684765..25685372 | 161..768 | 100 | <- | Minus |
arm_3R | 25685428..25685587 | 1..160 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:44:09 Download gff for
GH15189.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 25684765..25685372 | 161..768 | 100 | <- | Minus |
arm_3R | 25685428..25685587 | 1..160 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:10:58 Download gff for
GH15189.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 29599874..29600481 | 161..768 | 100 | <- | Minus |
3R | 29600537..29600696 | 1..160 | 100 | | Minus |
GH15189.pep Sequence
Translation from 303 to 482
> GH15189.pep
MGRITNGDADASVYLGLEVQGVDPGQPDNGPGRRAPRRRLLALRKVVSDR
GEAGSHCGG*
Sequence GH15189.pep has no blast hits.
GH15189.hyp Sequence
Translation from 303 to 482
> GH15189.hyp
MGRITNGDADASVYLGLEVQGVDPGQPDNGPGRRAPRRRLLALRKVVSDR
GEAGSHCGG*
Sequence GH15189.hyp has no blast hits.