Clone GH15189 Report

Search the DGRC for GH15189

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:151
Well:89
Vector:pOT2
Associated Gene/TranscriptCG31032-RA
Protein status:GH15189.pep: validated full length
Sequenced Size:810

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG7824 2002-01-01 Sim4 clustering to Release 2
CG31032 2002-05-18 Blastp of sequenced clone
CG31032 2003-01-01 Sim4 clustering to Release 3
CG7824 2008-04-29 Release 5.5 accounting

Clone Sequence Records

GH15189.complete Sequence

810 bp (810 high quality bases) assembled on 2002-05-18

GenBank Submission: AY118786

> GH15189.complete
CTAGAAAGCAGGCAGAGATTTGTTTACTTCTGCGAAGATTAATTCAGCAG
AAGCACGGAAATACGGATCCTTAATCATGACTAGATATTCACGTAAAAAC
CAGGCCTTGCTTCAACTCCCCGTTCCTTGGAGAACAGGAACGTAAAACCG
GCCTATAAGGTTTCCTAGGGCTTGGAACGGAGGGGGAAAGTGATACTTCA
AACGTGTCAAGGAGTAGGGTAGAACGCTCTTGATGTGTTCAGCGCAGAGC
ACCAATCAGTAGCGATCAGCAGCAACGTAAGCGAAACGGACCATCGGACT
CAAATGGGAAGAATCACAAACGGAGATGCAGATGCATCTGTCTATTTAGG
CCTGGAAGTACAAGGAGTTGATCCAGGACAACCCGACAATGGCCCTGGTA
GACGAGCGCCACGCAGACGGCTGCTTGCTCTTCGAAAAGTGGTGTCAGAT
CGAGGCGAGGCTGGCTCGCATTGTGGCGGATAGACGGGCGGCGGTGCCTC
AAGGACCTCACCCGTTGCTTGACTCCTCATTTGTTATTCGAGGACACCGG
ATGATCAGGTGCTAGGACGGCTTCTCTAAGATCTTCCTAGAGGATTGCAT
TGAGCAATTAGCCGACGCATGGGATGGACTATGCATTAAGCTTGTTCACG
CCAGCGAAATACCCAGTTCAAGTCAAGCGGCCCGTTTTGTTCATCAAGTA
AGTAAGAGCTTTTCCTGTTTGTACAAAGACAATACAGTTTATGAAATAAA
TAAACGATTGAAGGAACGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAA

GH15189.complete Blast Records

Blast to MB8.fasta performed on 2010-07-15 19:04:24 has no hits.
Blast to d_melanogaster_OreR.fa performed 2019-03-16 19:36:32
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 25681528..25682131 768..160 2845 98.2 Minus
chr3R 27901430 chr3R 25682186..25682345 160..1 785 99.4 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed 2010-04-22 16:53:43
Subject Length Description Subject Range Query Range Score Percent Strand
CR31032-RA 770 CR31032-RA 1..770 1..770 3850 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 19:36:30
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29859041..29859651 770..160 3055 100 Minus
3R 32079331 3R 29859706..29859865 160..1 800 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:35:51
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 29599872..29600482 770..160 3055 100 Minus
3R 31820162 3R 29600537..29600696 160..1 800 100 Minus
3R 31820162 3R 29599143..29599187 421..377 150 88.8 Minus
Blast to na_te.dros performed on 2019-03-16 19:36:30 has no hits.

GH15189.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 19:37:08 Download gff for GH15189.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 25681528..25682130 161..768 98 <- Minus
chr3R 25682186..25682345 1..160 99   Minus
Sim4 to dmel-all-CDS-r5.9.fasta performed on 2008-07-21 18:38:35 has no hits.
Sim4 to dmel-all-all_noncoding-r5.12.fasta performed 2010-04-22 16:53:44 Download gff for GH15189.complete
Subject Subject Range Query Range Percent Splice Strand
CR31032-RA 1..768 1..768 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed on 2008-07-21 18:38:35 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:37:08 Download gff for GH15189.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29859043..29859650 161..768 100 <- Minus
3R 29859706..29859865 1..160 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:37:08 Download gff for GH15189.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29859043..29859650 161..768 100 <- Minus
3R 29859706..29859865 1..160 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:37:08 Download gff for GH15189.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29859043..29859650 161..768 100 <- Minus
3R 29859706..29859865 1..160 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:44:09 Download gff for GH15189.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25684765..25685372 161..768 100 <- Minus
arm_3R 25685428..25685587 1..160 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:44:09 Download gff for GH15189.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25684765..25685372 161..768 100 <- Minus
arm_3R 25685428..25685587 1..160 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:44:09 Download gff for GH15189.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25684765..25685372 161..768 100 <- Minus
arm_3R 25685428..25685587 1..160 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:10:58 Download gff for GH15189.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29599874..29600481 161..768 100 <- Minus
3R 29600537..29600696 1..160 100   Minus

GH15189.pep Sequence

Translation from 303 to 482

> GH15189.pep
MGRITNGDADASVYLGLEVQGVDPGQPDNGPGRRAPRRRLLALRKVVSDR
GEAGSHCGG*
Sequence GH15189.pep has no blast hits.

GH15189.hyp Sequence

Translation from 303 to 482

> GH15189.hyp
MGRITNGDADASVYLGLEVQGVDPGQPDNGPGRRAPRRRLLALRKVVSDR
GEAGSHCGG*
Sequence GH15189.hyp has no blast hits.