BDGP Sequence Production Resources |
Search the DGRC for GH15220
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 152 |
Well: | 20 |
Vector: | pOT2 |
Associated Gene/Transcript | CG4842-RA |
Protein status: | GH15220.pep: gold |
Preliminary Size: | 918 |
Sequenced Size: | 961 |
Gene | Date | Evidence |
---|---|---|
CG4842 | 2002-01-01 | Sim4 clustering to Release 2 |
CG4842 | 2002-05-18 | Blastp of sequenced clone |
CG4842 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4842 | 2008-04-29 | Release 5.5 accounting |
CG4842 | 2008-08-15 | Release 5.9 accounting |
CG4842 | 2008-12-18 | 5.12 accounting |
961 bp (961 high quality bases) assembled on 2002-05-18
GenBank Submission: AY118787
> GH15220.complete CTGACTGAACTACACGAAGTCCAAAGAGCCAATAGTTTCACCACAGCGAC ATGGACTTAGCCGGCAAAAATGTCGTTTACCTTGGCGGATTCGGTGGAAT AGGCCAAAAATGTGTGCAAGAACTGCTCCAGCGACCAATAAAGGCTCTAG CCATTTTCGATCTAAATGCTAATGAGCAGCTCTTGGCTAAGTGGAAAAGC CAGCATCCCGATACGGACGTCTTCTACCACAAGCTGGACATAACCCAGAA ATCGGATATAGACGCGGCCTACAAGGCGACCGCCGAGAGATTCGGACACT TCGATGTGGTGGTCAATGGCAGTGGACTGATGAACGATCGCCTGGTCGAA CTCACTATTCAAATTAATCTGCTGGGAGTTATCAACAGCACTTTGACCGC CTTGGAGTACATGGACAAGGCCAAAGGCGGAAAGGGTGGGCTCATAGTGA ATATATCATCGGTGGCTGGACTGCAGCCCACAGCTATAATGGCCATTTAC TCGGCGGCCAAGACGGGAGTTACCACATTCACCAGAGCCATGGCTAACCC CTACTTTTACGCCCACTCTGGTGTAGGCTTCCTTACCATCTGTCCCGGAT TCACGGACACTGGGCTACTGGAGGATATTGGCAACAAGACGACATTCACC TACGACACTCCCATGCTGGCCATGTTCAACCGGGTGAAGCGTCAGAAGGC CGAGGATTGTGCGAGGAACCTGGTCTCAGCAATAGAGACGTCCAAAAATG GAACTGTCCTCATGCTGGAGATGGGTGAGACGACGGAGGTGGACATGCCA GTCATGTGGAAGCCACAGTTGGATAATTAATACCGCATTATTGTTTCTAT TATGTGCGCATCATATTGTAATCTCTTTCAATTCCTTGGTGATTTAAAAT AAAAGTGTTGTAAGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4842-RA | 1027 | CG4842-RA | 73..990 | 1..918 | 4590 | 100 | Plus |
CG18814.a | 1044 | CG18814.a | 184..651 | 180..647 | 960 | 80.3 | Plus |
CG18814-RA | 1014 | CG18814-RA | 425..699 | 373..647 | 490 | 78.5 | Plus |
CG18814-RA | 1014 | CG18814-RA | 178..369 | 180..371 | 480 | 83.3 | Plus |
CG18814-RA | 1014 | CG18814-RA | 64..155 | 66..157 | 235 | 83.6 | Plus |
CG18814.a | 1044 | CG18814.a | 70..161 | 66..157 | 235 | 83.6 | Plus |
CG18814-RA | 1014 | CG18814-RA | 712..835 | 657..780 | 140 | 74.1 | Plus |
CG18814.a | 1044 | CG18814.a | 664..787 | 657..780 | 140 | 74.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 16358893..16359263 | 546..916 | 1765 | 98.4 | Plus |
chr3L | 24539361 | chr3L | 16358351..16358580 | 142..371 | 1150 | 100 | Plus |
chr3L | 24539361 | chr3L | 16358649..16358820 | 371..542 | 845 | 99.4 | Plus |
chr3L | 24539361 | chr3L | 16358152..16358295 | 1..144 | 720 | 100 | Plus |
chr3L | 24539361 | chr3L | 16359802..16359993 | 180..371 | 480 | 83.3 | Plus |
chr3L | 24539361 | chr3L | 16360049..16360221 | 373..545 | 385 | 81.5 | Plus |
chr3L | 24539361 | chr3L | 16359633..16359694 | 66..127 | 220 | 90.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 16369148..16369520 | 546..918 | 1865 | 100 | Plus |
3L | 28110227 | 3L | 16368606..16368835 | 142..371 | 1150 | 100 | Plus |
3L | 28110227 | 3L | 16368904..16369078 | 371..545 | 875 | 100 | Plus |
3L | 28110227 | 3L | 16368407..16368550 | 1..144 | 720 | 100 | Plus |
3L | 28110227 | 3L | 16370060..16370251 | 180..371 | 480 | 83.3 | Plus |
3L | 28110227 | 3L | 16370307..16370479 | 373..545 | 385 | 81.5 | Plus |
3L | 28110227 | 3L | 16369891..16369952 | 66..127 | 220 | 90.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 16362248..16362620 | 546..918 | 1865 | 100 | Plus |
3L | 28103327 | 3L | 16361706..16361935 | 142..371 | 1150 | 100 | Plus |
3L | 28103327 | 3L | 16362004..16362178 | 371..545 | 875 | 100 | Plus |
3L | 28103327 | 3L | 16361507..16361650 | 1..144 | 720 | 100 | Plus |
3L | 28103327 | 3L | 16363160..16363351 | 180..371 | 480 | 83.3 | Plus |
3L | 28103327 | 3L | 16363407..16363579 | 373..545 | 385 | 81.5 | Plus |
3L | 28103327 | 3L | 16362991..16363052 | 66..127 | 220 | 90.3 | Plus |
3L | 28103327 | 3L | 16363749..16363872 | 657..780 | 140 | 74.1 | Plus |
3L | 28103327 | 3L | 16363646..16363736 | 557..647 | 140 | 76.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 16358152..16358294 | 1..143 | 100 | -> | Plus |
chr3L | 16358353..16358580 | 144..371 | 100 | -> | Plus |
chr3L | 16358650..16358823 | 372..545 | 98 | -> | Plus |
chr3L | 16358893..16359263 | 546..916 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4842-RA | 1..780 | 51..830 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4842-RA | 1..780 | 51..830 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4842-RA | 1..780 | 51..830 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4842-RA | 1..780 | 51..830 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4842-RA | 1..780 | 51..830 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4842-RA | 1..916 | 1..916 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4842-RA | 1..916 | 1..916 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4842-RA | 19..934 | 1..916 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4842-RA | 1..916 | 1..916 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4842-RA | 19..934 | 1..916 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16368407..16368549 | 1..143 | 100 | -> | Plus |
3L | 16368608..16368835 | 144..371 | 100 | -> | Plus |
3L | 16368905..16369078 | 372..545 | 100 | -> | Plus |
3L | 16369148..16369518 | 546..916 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16368407..16368549 | 1..143 | 100 | -> | Plus |
3L | 16368608..16368835 | 144..371 | 100 | -> | Plus |
3L | 16368905..16369078 | 372..545 | 100 | -> | Plus |
3L | 16369148..16369518 | 546..916 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16368407..16368549 | 1..143 | 100 | -> | Plus |
3L | 16368608..16368835 | 144..371 | 100 | -> | Plus |
3L | 16368905..16369078 | 372..545 | 100 | -> | Plus |
3L | 16369148..16369518 | 546..916 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 16361507..16361649 | 1..143 | 100 | -> | Plus |
arm_3L | 16361708..16361935 | 144..371 | 100 | -> | Plus |
arm_3L | 16362005..16362178 | 372..545 | 100 | -> | Plus |
arm_3L | 16362248..16362618 | 546..916 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16361708..16361935 | 144..371 | 100 | -> | Plus |
3L | 16362005..16362178 | 372..545 | 100 | -> | Plus |
3L | 16362248..16362618 | 546..916 | 100 | Plus | |
3L | 16361507..16361649 | 1..143 | 100 | -> | Plus |
Translation from 50 to 829
> GH15220.pep MDLAGKNVVYLGGFGGIGQKCVQELLQRPIKALAIFDLNANEQLLAKWKS QHPDTDVFYHKLDITQKSDIDAAYKATAERFGHFDVVVNGSGLMNDRLVE LTIQINLLGVINSTLTALEYMDKAKGGKGGLIVNISSVAGLQPTAIMAIY SAAKTGVTTFTRAMANPYFYAHSGVGFLTICPGFTDTGLLEDIGNKTTFT YDTPMLAMFNRVKRQKAEDCARNLVSAIETSKNGTVLMLEMGETTEVDMP VMWKPQLDN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10118-PA | 259 | GF10118-PA | 1..258 | 1..258 | 1150 | 82.6 | Plus |
Dana\GF24389-PA | 261 | GF24389-PA | 1..254 | 1..253 | 509 | 39.8 | Plus |
Dana\Adhr-PA | 272 | GF14889-PA | 3..253 | 2..253 | 379 | 32.4 | Plus |
Dana\GF12913-PA | 372 | GF12913-PA | 123..368 | 5..253 | 356 | 32.8 | Plus |
Dana\Adh-PA | 256 | GF14888-PA | 3..252 | 1..253 | 341 | 31.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16001-PA | 259 | GG16001-PA | 1..259 | 1..259 | 1293 | 91.9 | Plus |
Dere\GG13462-PA | 261 | GG13462-PA | 1..254 | 1..253 | 504 | 39 | Plus |
Dere\GG25347-PA | 256 | GG25347-PA | 3..255 | 2..254 | 493 | 37.8 | Plus |
Dere\Adhr-PA | 272 | GG25121-PA | 3..253 | 2..253 | 400 | 33.6 | Plus |
Dere\Adh-PA | 256 | GG25120-PA | 5..252 | 3..253 | 338 | 31.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15889-PA | 261 | GH15889-PA | 1..257 | 1..257 | 942 | 66.1 | Plus |
Dgri\GH15599-PA | 261 | GH15599-PA | 1..254 | 1..253 | 506 | 39 | Plus |
Dgri\GH13326-PA | 257 | GH13326-PA | 3..256 | 2..254 | 471 | 35.8 | Plus |
Dgri\GH13404-PA | 274 | GH13404-PA | 3..254 | 2..254 | 396 | 32.7 | Plus |
Dgri\Adh-PA | 254 | GH13025-PA | 1..250 | 1..253 | 326 | 29 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4842-PA | 259 | CG4842-PA | 1..259 | 1..259 | 1335 | 100 | Plus |
CG18814-PB | 267 | CG18814-PB | 1..260 | 1..259 | 1031 | 75 | Plus |
Pdh-PC | 261 | CG4899-PC | 1..254 | 1..253 | 501 | 39 | Plus |
Pdh-PA | 278 | CG4899-PA | 18..271 | 1..253 | 501 | 39 | Plus |
Pdh-PD | 260 | CG4899-PD | 1..253 | 1..253 | 495 | 39.4 | Plus |
Pdh-PB | 277 | CG4899-PB | 18..270 | 1..253 | 495 | 39.4 | Plus |
Fbp2-PC | 256 | CG3763-PC | 3..255 | 2..254 | 494 | 36 | Plus |
Fbp2-PB | 256 | CG3763-PB | 3..255 | 2..254 | 494 | 36 | Plus |
Fbp2-PA | 256 | CG3763-PA | 3..255 | 2..254 | 494 | 36 | Plus |
Adhr-PC | 272 | CG3484-PC | 3..253 | 2..253 | 406 | 34.4 | Plus |
Adhr-PB | 272 | CG3484-PB | 3..253 | 2..253 | 406 | 34.4 | Plus |
Adhr-PA | 272 | CG3484-PA | 3..253 | 2..253 | 406 | 34.4 | Plus |
Adh-PE | 256 | CG3481-PE | 5..252 | 3..253 | 342 | 31.7 | Plus |
Adh-PF | 256 | CG3481-PF | 5..252 | 3..253 | 342 | 31.7 | Plus |
Adh-PH | 256 | CG3481-PH | 5..252 | 3..253 | 342 | 31.7 | Plus |
Adh-PI | 256 | CG3481-PI | 5..252 | 3..253 | 342 | 31.7 | Plus |
Adh-PC | 256 | CG3481-PC | 5..252 | 3..253 | 342 | 31.7 | Plus |
CG3699-PA | 251 | CG3699-PA | 1..191 | 1..194 | 181 | 31.7 | Plus |
CG31548-PA | 256 | CG31548-PA | 1..191 | 1..189 | 150 | 28.8 | Plus |
CG9360-PA | 251 | CG9360-PA | 10..236 | 9..233 | 146 | 25.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16540-PA | 257 | GI16540-PA | 1..257 | 1..259 | 903 | 64.5 | Plus |
Dmoj\GI16877-PA | 261 | GI16877-PA | 1..254 | 1..253 | 507 | 38.6 | Plus |
Dmoj\GI17665-PA | 258 | GI17665-PA | 3..257 | 2..254 | 460 | 35.7 | Plus |
Dmoj\GI17645-PA | 276 | GI17645-PA | 3..253 | 2..253 | 402 | 33.6 | Plus |
Dmoj\Adh2-PA | 254 | GI17643-PA | 1..254 | 1..257 | 331 | 28.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17859-PA | 258 | GL17859-PA | 1..258 | 1..258 | 1110 | 77.5 | Plus |
Dper\GL26147-PA | 256 | GL26147-PA | 3..255 | 2..254 | 466 | 37.4 | Plus |
Dper\GL18003-PA | 184 | GL18003-PA | 1..180 | 1..182 | 362 | 40.1 | Plus |
Dper\Adh-PA | 254 | GL25993-PA | 1..252 | 1..259 | 357 | 32.7 | Plus |
Dper\Adhr-PA | 267 | GL25994-PA | 3..242 | 2..253 | 337 | 30.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18471-PA | 258 | GA18471-PA | 1..258 | 1..258 | 1115 | 77.5 | Plus |
Dpse\GA18512-PA | 261 | GA18512-PA | 1..253 | 1..256 | 509 | 39.7 | Plus |
Dpse\GA17670-PA | 256 | GA17670-PA | 3..255 | 2..254 | 467 | 37.4 | Plus |
Dpse\Adhr-PA | 278 | GA25223-PA | 3..253 | 2..253 | 387 | 32.8 | Plus |
Dpse\Adh-PA | 254 | GA17214-PA | 1..252 | 1..259 | 358 | 32.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25632-PA | 259 | GM25632-PA | 1..259 | 1..259 | 1339 | 95.8 | Plus |
Dsec\GM25633-PA | 267 | GM25633-PA | 1..260 | 1..259 | 1031 | 73.5 | Plus |
Dsec\GM24411-PA | 261 | GM24411-PA | 1..254 | 1..253 | 503 | 38.6 | Plus |
Dsec\GM17449-PA | 256 | GM17449-PA | 3..255 | 2..254 | 495 | 37.4 | Plus |
Dsec\Adhr-PA | 272 | GM15667-PA | 3..253 | 2..253 | 408 | 34 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14635-PA | 259 | GD14635-PA | 1..259 | 1..259 | 1336 | 95 | Plus |
Dsim\GD14637-PA | 164 | GD14637-PA | 5..157 | 108..259 | 591 | 72.5 | Plus |
Dsim\GD12481-PA | 261 | GD12481-PA | 1..254 | 1..253 | 510 | 39.4 | Plus |
Dsim\Fbp2-PA | 256 | GD23602-PA | 3..255 | 2..254 | 495 | 37 | Plus |
Dsim\Adhr-PA | 272 | GD23969-PA | 3..253 | 2..253 | 408 | 34 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12792-PA | 259 | GJ12792-PA | 1..259 | 1..259 | 914 | 65.6 | Plus |
Dvir\GJ12626-PA | 261 | GJ12626-PA | 1..254 | 1..253 | 498 | 38.2 | Plus |
Dvir\GJ17861-PA | 257 | GJ17861-PA | 3..256 | 2..254 | 481 | 37 | Plus |
Dvir\Adhr-PA | 275 | GJ18210-PA | 3..253 | 2..253 | 397 | 33.6 | Plus |
Dvir\Adh1-PA | 254 | GJ18208-PA | 1..254 | 1..257 | 341 | 29.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14485-PA | 260 | GK14485-PA | 1..259 | 1..258 | 1044 | 73.4 | Plus |
Dwil\GK17292-PA | 259 | GK17292-PA | 1..259 | 1..259 | 839 | 60.2 | Plus |
Dwil\GK17293-PA | 259 | GK17293-PA | 1..257 | 1..257 | 773 | 55.6 | Plus |
Dwil\GK20840-PA | 260 | GK20840-PA | 1..254 | 1..253 | 504 | 39 | Plus |
Dwil\GK24204-PA | 256 | GK24204-PA | 3..255 | 2..254 | 487 | 36.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23092-PA | 259 | GE23092-PA | 1..259 | 1..259 | 1279 | 91.5 | Plus |
Dyak\GE23094-PA | 259 | GE23094-PA | 1..259 | 1..259 | 1279 | 91.5 | Plus |
Dyak\GE23095-PA | 260 | GE23095-PA | 1..260 | 1..259 | 1020 | 71.2 | Plus |
Dyak\GE23093-PA | 260 | GE23093-PA | 1..260 | 1..259 | 1018 | 71.5 | Plus |
Dyak\Pdh-PA | 261 | GE22908-PA | 1..254 | 1..253 | 507 | 39 | Plus |
Translation from 50 to 829
> GH15220.hyp MDLAGKNVVYLGGFGGIGQKCVQELLQRPIKALAIFDLNANEQLLAKWKS QHPDTDVFYHKLDITQKSDIDAAYKATAERFGHFDVVVNGSGLMNDRLVE LTIQINLLGVINSTLTALEYMDKAKGGKGGLIVNISSVAGLQPTAIMAIY SAAKTGVTTFTRAMANPYFYAHSGVGFLTICPGFTDTGLLEDIGNKTTFT YDTPMLAMFNRVKRQKAEDCARNLVSAIETSKNGTVLMLEMGETTEVDMP VMWKPQLDN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4842-PA | 259 | CG4842-PA | 1..259 | 1..259 | 1335 | 100 | Plus |
CG18814-PB | 267 | CG18814-PB | 1..260 | 1..259 | 1031 | 75 | Plus |
Pdh-PC | 261 | CG4899-PC | 1..254 | 1..253 | 501 | 39 | Plus |
Pdh-PA | 278 | CG4899-PA | 18..271 | 1..253 | 501 | 39 | Plus |
Pdh-PD | 260 | CG4899-PD | 1..253 | 1..253 | 495 | 39.4 | Plus |