Clone GH15286 Report

Search the DGRC for GH15286

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:152
Well:86
Vector:pOT2
Associated Gene/TranscriptCG5455-RA
Protein status:GH15286.pep: gold
Preliminary Size:2706
Sequenced Size:2889

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG5455 2001-01-01 Release 2 assignment
CG5455 2001-07-04 Blastp of sequenced clone
CG5455 2003-01-01 Sim4 clustering to Release 3
CG5455 2008-04-29 Release 5.5 accounting
CG5455 2008-08-15 Release 5.9 accounting
CG5455 2008-12-18 5.12 accounting

Clone Sequence Records

GH15286.complete Sequence

2889 bp (2889 high quality bases) assembled on 2001-07-04

GenBank Submission: AY051500

> GH15286.complete
CCAAACGCTGCGGACGCGATTTTCGCTTCGCTCCTCTCGGATTCGCAACG
CTTTTCGAAAAAACCTCGCGTAACGCCAGAAGCTTTGTTGTTGTCGAGTG
TATAGCCCTGCCAGCAGCATGTTGGATGCGAATTAATTGGCCCACAGCCA
GTCCATCGAAAATACGGGAAGAGCAACACTCGAGCAGAAAGTTGGGAAAT
GTTTGTTAGCGATTCTGAGCCAGCTCAAGAATCATTTGCCTGCAATGGCA
ATCCCCCAGTGGCAAACGATGGCGCAGAAATCAAGAACCTGAAGAACAAT
AACCGAAGCGAAAACAGAAGCGCCCATCTTGGAGGTGGTGGAGAAGAAGA
CAACAGCTCACCACTGCAGGAAATCGATGAACATTACGTCTGCGACATTG
CCATGATGCGAATAGGTGGGGAGGAGAGCCTACCGGTGACACACAATGAG
CCAGTGGATGAATCACCACCGCTGGCCCACAATGAAAGTACAAACAATGA
GAACGAGGTGGAGATCGATCGCCAGGAGGAGGAGCAGGCGGTCAGCGATC
TGGTGCGATCGAGCAGTGCCGGTGCCCTCATGGAGGCAGACAGCAAAAAT
GGGGGCAGCATGCGAGTGGTTTTTGGCATCCTGGTGCGACTAGTTCTTCC
ACTGGCCAATGGAGTAGCCAGGGGCATCAAGGGCATACGCGATGTTCGCG
TGCTGAGGGTTCTCCAGAATCTGGCCTCCAGCCGGCAGGCCCTCACCAAT
CTGGTGGCCTTTGCCGCCAACACTATATCACTGAATCTTTCTTCGGTTCA
GGTTTCCAATCGCATGGGGCCCCTGCTGAAGCTCCTGAAAATGCGCAAAT
CACAGGATGGCCTTGAGAGTCTTCCCGACACATTGAGTGCGCCCTCCACT
CCCTGCACTCCCTGTCCAACCAGCAATCCAATGCAGGGTCCGCCCTTTTA
CACCGTTCGCTCGGACGCACCGAACTGTTGTACAATAAACATCCTGGCCG
AGCCGCCACCGGGTCAACCGATACGAGCAGATATTGTGCTCATCCATGGT
CTACATGGATCTTTGGTGAACACATGGAAACAAGGACTCTGGCAGAACGA
TCGCCAGCCGGTGGAGTTTGAAAGACCACCACGTCCGCCAGTTCGTCCAC
CAAAACGACCTCGTCACTCCCGTAGTGCAGCGATTCATCCAGCTCCGCGG
GAGAAGCGAGCAAAGTTTGCTTCCCTCAACCGATGTATGGACACCCCAGA
TGATTCTCCAGTGCGGCGAAGGACACGGCTCCAGAAGTCTATGCCAATGC
AGCCGGAAGACTTCCAGATTAATGCTTCCGATAGCGATGATAGCGACTAT
GCTTATGTTTGCGGAGAGCCTGAAGAAATCCAGATTTGCGAGGGCATAGA
GTACAGCTTTCCCACTTTTCGGCTCAGGATGCAGGATAACAGCCGTTTGC
TACAGGCAGAGTTGGAGTCCATGCTGCAGGCCAATGGCAATGAAGAGGGG
GGGACCAATGGGAAGGATAACCGCCCACGTCCCCCCTCACCAGCCACGCC
TCGTAAGGCCGCCCGCAAGAGCAAGCCATCTCCAAATGATCCAAACTACT
CCAAGTGCTGGCCTGGGGATTGGCTTCCACTGGATTGTCCCGGCGTGCGG
GTTATTGCCTTAAACTACACCACTGATCAGTACCTTTGGAGACCGCTGTG
GAAAAGCAAGGAGCCGCGCTCCAGCTTAATCCAAAGGTCTCGTGAGATGG
CCGAGCTGCTCATTCAGCATCGCGTTGGCCATGGTCGTCCTATTATCTAT
GTGGGCCACTCGAAGGGTGGACTCTTCATCAAGCAACTGATGGTAGACGC
CTGGGAAAGCGGTCGTCCTGCGATGACCCCGCTTTGGCGATCTGCCCGCG
GTTGCTTCTTTTACTCGGTGCCCCATCGAGGATCCCACTTGGCCAGCATC
AAGGCGCCACTACTCTCCCGCTCCGTGGAGTTGCTAGAGATTGAAAAAAA
TAACAAGTACCTGCTGGATTTACATCGGAGATTTGCGGGACTATATCATC
TGGGTCATCTTAAGATCGAGGTGTTTAGTTTCGTGGAGACCGCCTTGACG
CTCATGTCAGTGCTGTATCTTCGCATTGTGGGAGTGGACTCAGCGGATCC
TGGAATTGGCGACGTCTGCGGTATTCGTCTGGATCATCGAGAGATCTGCA
AACCACGAGGACGGGATTGTATTTTGTACAAAGAACTGGTGAAAATGATT
GAGAAGGTGTGCTAAGCACATGGCGAAAGTAGAAGACATTATATGTTAAA
AAGTATACTGTATGTAGGACCTGATATATTTAAACCATAATGTGTATAGA
ACCGACAATTTGATGATAATTACGCGTACCTATATGAGATGCCACAGCAT
CCAGCTGGGGCACACTAAATGTTAGAGCGCCGCTTGTTAATTTAATAGTG
CATAGCATAGGTGTTCATATAATTATATACGCCTATCCATAGCTCAAGTT
AGTTATACACATATTATGTTGCCTTTAGTTTAAGCTTAAAACGAGCAGAT
ATATATGCTCAGACATCCCATCTGGTGTCAATGATATTTTGGAATTTTTG
TGATCGATTGTGATCATTTTTCAAGCACTTTATTGTGATGATCCCCTAAA
TACCCGTGAATACGTTATTGATATTGTACCATACTTAGAGTTTGCTAGTT
TCTATGAATCTATCTACCTATTAATCGAAACACACACCGCTGTAAAATGT
TACCAACGAAGACACAATTGATACATATTTGAATTTCCAGACAATTAAAT
AATCGATGTTTTATACCTATTTGTTAAGGATTTAATTACTAAAACCAATA
AATTATATTTTATAAAAACCCAAAAAAAAAAAAAAAAAA

GH15286.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:36:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG5455-RA 3031 CG5455-RA 120..2992 1..2873 14365 100 Plus
CG5455.b 2887 CG5455.b 17..2887 1..2873 14310 99.9 Plus
CG5455.a 2883 CG5455.a 17..2883 1..2873 14250 99.7 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 07:09:59
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 22292329..22293054 2146..2871 3570 99.4 Plus
chr3R 27901430 chr3R 22291192..22291848 1347..2003 3255 99.7 Plus
chr3R 27901430 chr3R 22290589..22291133 802..1346 2725 100 Plus
chr3R 27901430 chr3R 22289634..22290116 105..587 2370 99.4 Plus
chr3R 27901430 chr3R 22290178..22290392 588..802 1075 100 Plus
chr3R 27901430 chr3R 22291903..22292049 2000..2146 735 100 Plus
chr3R 27901430 chr3R 22284590..22284690 1..101 505 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:53:51 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 07:09:57
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 26469283..26470010 2146..2873 3640 100 Plus
3R 32079331 3R 26468146..26468802 1347..2003 3270 99.8 Plus
3R 32079331 3R 26467543..26468087 802..1346 2725 100 Plus
3R 32079331 3R 26466585..26467070 102..587 2430 100 Plus
3R 32079331 3R 26467132..26467346 588..802 1075 100 Plus
3R 32079331 3R 26468857..26469003 2000..2146 735 100 Plus
3R 32079331 3R 26461546..26461646 1..101 505 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:57:39
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 26210114..26210841 2146..2873 3640 100 Plus
3R 31820162 3R 26208977..26209633 1347..2003 3270 99.8 Plus
3R 31820162 3R 26208374..26208918 802..1346 2725 100 Plus
3R 31820162 3R 26207416..26207901 102..587 2430 100 Plus
3R 31820162 3R 26207963..26208177 588..802 1075 100 Plus
3R 31820162 3R 26209688..26209834 2000..2146 735 100 Plus
3R 31820162 3R 26202377..26202477 1..101 505 100 Plus
Blast to na_te.dros performed on 2019-03-16 07:09:57 has no hits.

GH15286.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 07:11:07 Download gff for GH15286.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 22290178..22290392 588..802 100 -> Plus
chr3R 22284590..22284690 1..101 100 -> Plus
chr3R 22289631..22290116 102..587 99 -> Plus
chr3R 22290590..22291133 803..1346 100 -> Plus
chr3R 22291192..22291844 1347..1999 99 -> Plus
chr3R 22291903..22292049 2000..2146 100 -> Plus
chr3R 22292330..22293029 2147..2846 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:44:20 Download gff for GH15286.complete
Subject Subject Range Query Range Percent Splice Strand
CG5455-RC 1..2067 199..2265 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:26:34 Download gff for GH15286.complete
Subject Subject Range Query Range Percent Splice Strand
CG5455-RC 1..2067 199..2265 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:30:13 Download gff for GH15286.complete
Subject Subject Range Query Range Percent Splice Strand
CG5455-RA 1..2067 199..2265 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:59:42 Download gff for GH15286.complete
Subject Subject Range Query Range Percent Splice Strand
CG5455-RC 1..2067 199..2265 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:28:51 Download gff for GH15286.complete
Subject Subject Range Query Range Percent Splice Strand
CG5455-RA 1..2067 199..2265 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:25:34 Download gff for GH15286.complete
Subject Subject Range Query Range Percent Splice Strand
CG5455-RA 18..2888 1..2871 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:26:33 Download gff for GH15286.complete
Subject Subject Range Query Range Percent Splice Strand
CG5455-RA 18..2888 1..2871 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:30:13 Download gff for GH15286.complete
Subject Subject Range Query Range Percent Splice Strand
CG5455-RA 20..2890 1..2871 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:59:42 Download gff for GH15286.complete
Subject Subject Range Query Range Percent Splice Strand
CG5455-RA 18..2888 1..2871 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:28:51 Download gff for GH15286.complete
Subject Subject Range Query Range Percent Splice Strand
CG5455-RA 20..2890 1..2871 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:11:07 Download gff for GH15286.complete
Subject Subject Range Query Range Percent Splice Strand
3R 26461546..26461646 1..101 100 -> Plus
3R 26466585..26467070 102..587 100 -> Plus
3R 26467132..26467346 588..802 100 -> Plus
3R 26467544..26468087 803..1346 100 -> Plus
3R 26468146..26468798 1347..1999 100 -> Plus
3R 26468857..26469003 2000..2146 100 -> Plus
3R 26469284..26470008 2147..2871 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:11:07 Download gff for GH15286.complete
Subject Subject Range Query Range Percent Splice Strand
3R 26461546..26461646 1..101 100 -> Plus
3R 26466585..26467070 102..587 100 -> Plus
3R 26467132..26467346 588..802 100 -> Plus
3R 26467544..26468087 803..1346 100 -> Plus
3R 26468146..26468798 1347..1999 100 -> Plus
3R 26468857..26469003 2000..2146 100 -> Plus
3R 26469284..26470008 2147..2871 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:11:07 Download gff for GH15286.complete
Subject Subject Range Query Range Percent Splice Strand
3R 26461546..26461646 1..101 100 -> Plus
3R 26466585..26467070 102..587 100 -> Plus
3R 26467132..26467346 588..802 100 -> Plus
3R 26467544..26468087 803..1346 100 -> Plus
3R 26468146..26468798 1347..1999 100 -> Plus
3R 26468857..26469003 2000..2146 100 -> Plus
3R 26469284..26470008 2147..2871 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:30:13 Download gff for GH15286.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 22287268..22287368 1..101 100 -> Plus
arm_3R 22292307..22292792 102..587 100 -> Plus
arm_3R 22292854..22293068 588..802 100 -> Plus
arm_3R 22293266..22293809 803..1346 100 -> Plus
arm_3R 22293868..22294520 1347..1999 100 -> Plus
arm_3R 22294579..22294725 2000..2146 100 -> Plus
arm_3R 22295006..22295730 2147..2871 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:37:32 Download gff for GH15286.complete
Subject Subject Range Query Range Percent Splice Strand
3R 26207416..26207901 102..587 100 -> Plus
3R 26207963..26208177 588..802 100 -> Plus
3R 26208375..26208918 803..1346 100 -> Plus
3R 26208977..26209629 1347..1999 100 -> Plus
3R 26209688..26209834 2000..2146 100 -> Plus
3R 26210115..26210839 2147..2871 100   Plus
3R 26202377..26202477 1..101 100 -> Plus

GH15286.pep Sequence

Translation from 198 to 2264

> GH15286.pep
MFVSDSEPAQESFACNGNPPVANDGAEIKNLKNNNRSENRSAHLGGGGEE
DNSSPLQEIDEHYVCDIAMMRIGGEESLPVTHNEPVDESPPLAHNESTNN
ENEVEIDRQEEEQAVSDLVRSSSAGALMEADSKNGGSMRVVFGILVRLVL
PLANGVARGIKGIRDVRVLRVLQNLASSRQALTNLVAFAANTISLNLSSV
QVSNRMGPLLKLLKMRKSQDGLESLPDTLSAPSTPCTPCPTSNPMQGPPF
YTVRSDAPNCCTINILAEPPPGQPIRADIVLIHGLHGSLVNTWKQGLWQN
DRQPVEFERPPRPPVRPPKRPRHSRSAAIHPAPREKRAKFASLNRCMDTP
DDSPVRRRTRLQKSMPMQPEDFQINASDSDDSDYAYVCGEPEEIQICEGI
EYSFPTFRLRMQDNSRLLQAELESMLQANGNEEGGTNGKDNRPRPPSPAT
PRKAARKSKPSPNDPNYSKCWPGDWLPLDCPGVRVIALNYTTDQYLWRPL
WKSKEPRSSLIQRSREMAELLIQHRVGHGRPIIYVGHSKGGLFIKQLMVD
AWESGRPAMTPLWRSARGCFFYSVPHRGSHLASIKAPLLSRSVELLEIEK
NNKYLLDLHRRFAGLYHLGHLKIEVFSFVETALTLMSVLYLRIVGVDSAD
PGIGDVCGIRLDHREICKPRGRDCILYKELVKMIEKVC*

GH15286.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:54:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16126-PA 684 GF16126-PA 1..684 1..688 2795 81 Plus
Dana\GF14829-PA 785 GF14829-PA 505..731 467..684 324 33 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:54:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG11483-PA 687 GG11483-PA 1..687 1..688 3357 96.1 Plus
Dere\GG21692-PA 785 GG21692-PA 505..731 467..684 330 32.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:54:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13988-PA 675 GH13988-PA 59..675 56..688 2207 71.7 Plus
Dgri\GH10166-PA 796 GH10166-PA 516..742 467..684 348 33.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:12:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG5455-PB 688 CG5455-PB 1..688 1..688 3640 100 Plus
CG5455-PA 688 CG5455-PA 1..688 1..688 3640 100 Plus
CG10383-PB 784 CG10383-PB 504..732 467..686 324 32.3 Plus
CG10383-PA 784 CG10383-PA 504..732 467..686 324 32.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:54:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI24844-PA 680 GI24844-PA 52..680 54..688 2222 73.8 Plus
Dmoj\GI14198-PA 788 GI14198-PA 352..736 276..684 348 26 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:54:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL23861-PA 689 GL23861-PA 1..689 1..688 2624 79.9 Plus
Dper\GL18493-PA 785 GL18493-PA 500..730 463..684 327 32 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:54:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18893-PA 687 GA18893-PA 1..687 1..688 2649 79.7 Plus
Dpse\GA10290-PA 800 GA10290-PA 515..745 463..684 329 32 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:54:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM10327-PA 689 GM10327-PA 1..689 1..688 3573 97.5 Plus
Dsec\GM17071-PA 781 GM17071-PA 501..727 467..684 330 32.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:54:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD21288-PA 689 GD21288-PA 1..689 1..688 3591 98.3 Plus
Dsim\GD21817-PA 462 GD21817-PA 182..408 467..684 335 32.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:54:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ24488-PA 675 GJ24488-PA 38..675 52..688 2411 75.7 Plus
Dvir\GJ20441-PA 793 GJ20441-PA 515..741 467..684 325 32.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:54:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK10949-PA 693 GK10949-PA 45..693 54..688 2549 79.3 Plus
Dwil\GK24341-PA 799 GK24341-PA 354..747 276..686 349 25.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:54:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE23675-PA 687 GE23675-PA 1..687 1..688 3532 96.5 Plus
Dyak\GE12715-PA 787 GE12715-PA 507..733 467..684 329 32.6 Plus

GH15286.hyp Sequence

Translation from 198 to 2264

> GH15286.hyp
MFVSDSEPAQESFACNGNPPVANDGAEIKNLKNNNRSENRSAHLGGGGEE
DNSSPLQEIDEHYVCDIAMMRIGGEESLPVTHNEPVDESPPLAHNESTNN
ENEVEIDRQEEEQAVSDLVRSSSAGALMEADSKNGGSMRVVFGILVRLVL
PLANGVARGIKGIRDVRVLRVLQNLASSRQALTNLVAFAANTISLNLSSV
QVSNRMGPLLKLLKMRKSQDGLESLPDTLSAPSTPCTPCPTSNPMQGPPF
YTVRSDAPNCCTINILAEPPPGQPIRADIVLIHGLHGSLVNTWKQGLWQN
DRQPVEFERPPRPPVRPPKRPRHSRSAAIHPAPREKRAKFASLNRCMDTP
DDSPVRRRTRLQKSMPMQPEDFQINASDSDDSDYAYVCGEPEEIQICEGI
EYSFPTFRLRMQDNSRLLQAELESMLQANGNEEGGTNGKDNRPRPPSPAT
PRKAARKSKPSPNDPNYSKCWPGDWLPLDCPGVRVIALNYTTDQYLWRPL
WKSKEPRSSLIQRSREMAELLIQHRVGHGRPIIYVGHSKGGLFIKQLMVD
AWESGRPAMTPLWRSARGCFFYSVPHRGSHLASIKAPLLSRSVELLEIEK
NNKYLLDLHRRFAGLYHLGHLKIEVFSFVETALTLMSVLYLRIVGVDSAD
PGIGDVCGIRLDHREICKPRGRDCILYKELVKMIEKVC*

GH15286.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 08:00:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG5455-PB 688 CG5455-PB 1..688 1..688 3640 100 Plus
CG5455-PA 688 CG5455-PA 1..688 1..688 3640 100 Plus
CG10383-PB 784 CG10383-PB 504..732 467..686 324 32.3 Plus
CG10383-PA 784 CG10383-PA 504..732 467..686 324 32.3 Plus