Clone GH15431 Report

Search the DGRC for GH15431

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:154
Well:31
Vector:pOT2
Associated Gene/TranscriptCG3651-RC
Protein status:GH15431.pep: gold
Preliminary Size:1960
Sequenced Size:2532

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG3651 2002-01-01 Sim4 clustering to Release 2
CG3651 2002-05-18 Blastp of sequenced clone
CG3651 2003-01-01 Sim4 clustering to Release 3
CG3651 2008-04-29 Release 5.5 accounting
CG3651 2008-08-15 Release 5.9 accounting
CG3651 2008-12-18 5.12 accounting

Clone Sequence Records

GH15431.complete Sequence

2532 bp (2532 high quality bases) assembled on 2002-05-18

GenBank Submission: AY118789

> GH15431.complete
CCAGGCCGCAAATGGAATGGATTTTCGAGAGCTAGATAAATTAAACTGGC
GTTTGCATCTGAGTAACAATAACAATATCGTTAATTATAGTGCGAACCGA
CACCTCGGTCCTGATGCGGCTGAAGAGCGACGCCCGGAGCTCTTAGTCAG
CCAAGTCAATTGTGGGACCGGTGTAAATACAATGGGCACAAATCAAAAAC
GAGCAGCAACAACATCAGCGCAGGCCGTAGCGGTGGACGAGCAGGTCGTG
GGAGCCGTGGGTGGTGGCGGGGCAAAGGCAGAGGAGTGCCCTGCAGCGAC
CATGGCCGCAGAGGATGGTGATAAGGTGGAAAGTCCTTCTTACTGCGAAC
TGGATCTGGACGTGGCAAGCTACGGGCTAGCAGCAGCTGCCCTCTCATCC
TTTGAAGCCGCCGCCTGTGGCTATAATTCCAGCCGAACTTCCATAAACAA
CTCAACCGAAAACCTGAGCTATGCCAGTGACAATATTTACGGCGACGATA
TAATTTTGCTGGACGACAACGACATGAACGCGGAGGAGATATCTATCAAC
TCCGACGACTGCGTCTACGCTTACCGTGGTGAAGGGGCTGATTTTGACAT
GAACATGGATATCATCGCCACGGGAAGGGTTGGCGGGCAACACTTCGACC
TTGGCCGAGGACCAGTGAATGCTATGGGAGGCGATAGCCTCATTTACGGC
GAAGATGAGACGGAGTTTCTTGAAATGGACTTTGAGCCAGACCCCTCATC
AGAGTTGGAGCTTGTTGGCGGAACCACCGATATGACCATCCAGCCTCAGG
CCAATTTGTTGTTAATGCAACGCGACTATAGCCAAATGAACAGCATAGGC
GGAACTACTTCTACGCAGGAAGGAAAGCTGCACAGCTCGCCCATAGATGA
TTTTCCGCAGGAGGACCTAATGCAGCAGCAAAAGCTACGCCTTAGTAAGA
AGTTCGCGCGCATCAGCTTGAATTTAGATAAAATCAAAGACGTTGGTGCT
GGTGGAAGTGGCGTGGACATAGATTTAAATGAGCTAATAGTTATTGGCTC
GGAAAAGCAGGCTGAATCCTCCGGAAGCTTTCGGTCAGTGAAGTCTTATC
AGGCTCATTCCTTGCCCAACACATTGCACACAGGCTCAAATTTTTCGCGC
AGCACTAGTGTCCCCAGCGAACACCCAGAGCCTAAGCTGACTGGTGCTAA
GCCAAAGCGTTTTTTGCACACCTCGTCTGTGATGACTAAAAGCTCCTCAT
ATAAGTCGCGGCGCTCTCATACATCAGCTAGCTTTGATGAACGTTGCTAC
AGCTGCACTGATTTCCGGGCAACAACATGTCAGCAGCAACAGTCAGGGTC
GAAGTCAAAGCAAGATCAAGTGCCTCCTATACTGGTGGCTCCTGCGACTG
TTGGGGCTTTGACCACGTCTTCTTCGTGCACGGGCCAATTTGACTTGGGA
ATAACCGAGGAGAACTGCTTAGACTGCCTAGAAAAGGAGTTCTTGGCCAA
TACCATAGGCAAAGTCGTAGACCCGGGAACATGTCCTAAGTGTCGTAGAT
CAGCTGGCAGTCGGGGCAGTAGTATTTCGCTTTACTCACGGTCGGACCAG
GTTCGCTGTCGAAGCGGGTCCCCAGTATACTGCTATGGAGGTCCGTTCGC
CGGCTGGCACAGCTTAATAGCAACCGGAATTGTTTCTGGTTCCAATTTGG
GTCCACCCTGCAACCAAAGGTTTATTTCGTGTGATAATAGTTTCAACGGT
CTACAGCTCCTCAATCAAGGCTATCTGACTGAGCCACTGGTGGCAAGTCT
GTCTACAGGAAAGACGTGCGACGAGGAGCACCTAGTGCAAGCGCTAGATA
AACTGCGCGTACCCTATGACAGGGAGCTACTTCATGGCTATTTCAAGCAA
TTGGCCAAGCGGCGACGGACGGAAAGTAGTGTCAATCTCAAGCAGCTATT
AATACAGGCCTCAAAGCAGCAGGGAAACCATCGCAAGCTCAAACGGTTGA
TCGAGATGGCGACCCACCAACAGCTTATTGTACAATTTAAGGGGAAAGCT
GCAGACAAAACTGAATGGGTGCCTATAAATGTAAGGGACATACTTAATGC
CTGGGCACGTTGTCGAGATCTTTCCCTCCTTCAGCAACTAGATGACCGCT
TTCATTGCGCAAACGTGATGGGAAAGGTTGGTCACATCGTGCGTCAGGCA
ACAGTAGCAGCATCCACACAAGCACAGGCATCGTCGTCAACCTCCTTTTG
TAAACGCACCCTGCCCGAATATTTAATGATCCCGCAGTATTACATGAGTG
GGGTACTGACTCTAACCCGCAAATGTTAGGACGTATTTGCACAACCACTC
ATTTATTTTCACATTAAGCCGGATACACATCATCTCTCTAGAAGTGCTTA
GCCCAGTTTTATTGTTTAATTTTTTTTAATAAGTCATCTTCCATATTAAA
TCAGGTGATCGCATGGCCGTGACCCACCGCTTAAGTCGGGTTCAAAAGTC
TCTCCGCTCTAAAAAAAAAAAAAAAAAAAAAA

GH15431.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:04:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG3651-RA 2664 CG3651-RA 35..2563 1..2529 12615 99.9 Plus
CG3651.a 2547 CG3651.a 21..2544 1..2529 12515 99.7 Plus
CG3651.c 2517 CG3651.c 75..2514 90..2529 12170 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 15:25:30
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 22120789..22122222 323..1756 7170 100 Plus
chr2L 23010047 chr2L 22123322..22123661 2171..2510 1670 99.4 Plus
chr2L 23010047 chr2L 22120397..22120722 1..326 1630 100 Plus
chr2L 23010047 chr2L 22122280..22122569 1755..2044 1450 100 Plus
chr2L 23010047 chr2L 22122630..22122762 2044..2176 650 99.2 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:54:01 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 15:25:28
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 22122248..22123681 323..1756 7170 100 Plus
2L 23513712 2L 22124781..22125139 2171..2529 1765 99.4 Plus
2L 23513712 2L 22121856..22122181 1..326 1630 100 Plus
2L 23513712 2L 22123739..22124028 1755..2044 1450 100 Plus
2L 23513712 2L 22124089..22124221 2044..2176 650 99.2 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:35:52
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 22122248..22123681 323..1756 7170 100 Plus
2L 23513712 2L 22124781..22125139 2171..2529 1765 99.4 Plus
2L 23513712 2L 22121856..22122181 1..326 1630 100 Plus
2L 23513712 2L 22123739..22124028 1755..2044 1450 100 Plus
2L 23513712 2L 22124089..22124221 2044..2176 650 99.2 Plus
Blast to na_te.dros performed on 2019-03-15 15:25:28 has no hits.

GH15431.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 15:26:29 Download gff for GH15431.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 22120397..22120721 1..325 100 -> Plus
chr2L 22120792..22122222 326..1756 100 -> Plus
chr2L 22122282..22122569 1757..2044 100 -> Plus
chr2L 22122631..22122757 2045..2171 100 -> Plus
chr2L 22123323..22123661 2172..2510 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:44:32 Download gff for GH15431.complete
Subject Subject Range Query Range Percent Splice Strand
CG3651-RA 21..2349 1..2329 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:46:21 Download gff for GH15431.complete
Subject Subject Range Query Range Percent Splice Strand
CG3651-RA 21..2349 1..2329 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 01:28:27 Download gff for GH15431.complete
Subject Subject Range Query Range Percent Splice Strand
CG3651-RC 1..2313 17..2329 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:38:37 Download gff for GH15431.complete
Subject Subject Range Query Range Percent Splice Strand
CG3651-RA 21..2349 1..2329 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:06:17 Download gff for GH15431.complete
Subject Subject Range Query Range Percent Splice Strand
CG3651-RC 1..2313 17..2329 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 21:21:58 Download gff for GH15431.complete
Subject Subject Range Query Range Percent Splice Strand
CG3651-RA 21..2530 1..2510 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:46:21 Download gff for GH15431.complete
Subject Subject Range Query Range Percent Splice Strand
CG3651-RA 21..2530 1..2510 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:28:27 Download gff for GH15431.complete
Subject Subject Range Query Range Percent Splice Strand
CG3651-RC 17..2526 1..2510 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:38:38 Download gff for GH15431.complete
Subject Subject Range Query Range Percent Splice Strand
CG3651-RA 21..2530 1..2510 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:06:17 Download gff for GH15431.complete
Subject Subject Range Query Range Percent Splice Strand
CG3651-RC 17..2526 1..2510 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:26:29 Download gff for GH15431.complete
Subject Subject Range Query Range Percent Splice Strand
2L 22123741..22124028 1757..2044 100 -> Plus
2L 22124090..22124216 2045..2171 100 -> Plus
2L 22121856..22122180 1..325 100 -> Plus
2L 22122251..22123681 326..1756 100 -> Plus
2L 22124782..22125120 2172..2510 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:26:29 Download gff for GH15431.complete
Subject Subject Range Query Range Percent Splice Strand
2L 22123741..22124028 1757..2044 100 -> Plus
2L 22124090..22124216 2045..2171 100 -> Plus
2L 22121856..22122180 1..325 100 -> Plus
2L 22122251..22123681 326..1756 100 -> Plus
2L 22124782..22125120 2172..2510 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:26:29 Download gff for GH15431.complete
Subject Subject Range Query Range Percent Splice Strand
2L 22123741..22124028 1757..2044 100 -> Plus
2L 22124090..22124216 2045..2171 100 -> Plus
2L 22121856..22122180 1..325 100 -> Plus
2L 22122251..22123681 326..1756 100 -> Plus
2L 22124782..22125120 2172..2510 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:28:27 Download gff for GH15431.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 22121856..22122180 1..325 100 -> Plus
arm_2L 22122251..22123681 326..1756 100 -> Plus
arm_2L 22123741..22124028 1757..2044 100 -> Plus
arm_2L 22124090..22124216 2045..2171 100 -> Plus
arm_2L 22124782..22125120 2172..2510 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:11:00 Download gff for GH15431.complete
Subject Subject Range Query Range Percent Splice Strand
2L 22121856..22122180 1..325 100 -> Plus
2L 22122251..22123681 326..1756 100 -> Plus
2L 22123741..22124028 1757..2044 100 -> Plus
2L 22124090..22124216 2045..2171 100 -> Plus
2L 22124782..22125120 2172..2510 100   Plus

GH15431.hyp Sequence

Translation from 0 to 2328

> GH15431.hyp
QAANGMDFRELDKLNWRLHLSNNNNIVNYSANRHLGPDAAEERRPELLVS
QVNCGTGVNTMGTNQKRAATTSAQAVAVDEQVVGAVGGGGAKAEECPAAT
MAAEDGDKVESPSYCELDLDVASYGLAAAALSSFEAAACGYNSSRTSINN
STENLSYASDNIYGDDIILLDDNDMNAEEISINSDDCVYAYRGEGADFDM
NMDIIATGRVGGQHFDLGRGPVNAMGGDSLIYGEDETEFLEMDFEPDPSS
ELELVGGTTDMTIQPQANLLLMQRDYSQMNSIGGTTSTQEGKLHSSPIDD
FPQEDLMQQQKLRLSKKFARISLNLDKIKDVGAGGSGVDIDLNELIVIGS
EKQAESSGSFRSVKSYQAHSLPNTLHTGSNFSRSTSVPSEHPEPKLTGAK
PKRFLHTSSVMTKSSSYKSRRSHTSASFDERCYSCTDFRATTCQQQQSGS
KSKQDQVPPILVAPATVGALTTSSSCTGQFDLGITEENCLDCLEKEFLAN
TIGKVVDPGTCPKCRRSAGSRGSSISLYSRSDQVRCRSGSPVYCYGGPFA
GWHSLIATGIVSGSNLGPPCNQRFISCDNSFNGLQLLNQGYLTEPLVASL
STGKTCDEEHLVQALDKLRVPYDRELLHGYFKQLAKRRRTESSVNLKQLL
IQASKQQGNHRKLKRLIEMATHQQLIVQFKGKAADKTEWVPINVRDILNA
WARCRDLSLLQQLDDRFHCANVMGKVGHIVRQATVAASTQAQASSSTSFC
KRTLPEYLMIPQYYMSGVLTLTRKC*

GH15431.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 08:00:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG3651-PD 770 CG3651-PD 1..770 6..775 3997 100 Plus
CG3651-PC 770 CG3651-PC 1..770 6..775 3997 100 Plus
CG3651-PB 715 CG3651-PB 1..715 61..775 3702 100 Plus

GH15431.pep Sequence

Translation from 1 to 2328

> GH15431.pep
QAANGMDFRELDKLNWRLHLSNNNNIVNYSANRHLGPDAAEERRPELLVS
QVNCGTGVNTMGTNQKRAATTSAQAVAVDEQVVGAVGGGGAKAEECPAAT
MAAEDGDKVESPSYCELDLDVASYGLAAAALSSFEAAACGYNSSRTSINN
STENLSYASDNIYGDDIILLDDNDMNAEEISINSDDCVYAYRGEGADFDM
NMDIIATGRVGGQHFDLGRGPVNAMGGDSLIYGEDETEFLEMDFEPDPSS
ELELVGGTTDMTIQPQANLLLMQRDYSQMNSIGGTTSTQEGKLHSSPIDD
FPQEDLMQQQKLRLSKKFARISLNLDKIKDVGAGGSGVDIDLNELIVIGS
EKQAESSGSFRSVKSYQAHSLPNTLHTGSNFSRSTSVPSEHPEPKLTGAK
PKRFLHTSSVMTKSSSYKSRRSHTSASFDERCYSCTDFRATTCQQQQSGS
KSKQDQVPPILVAPATVGALTTSSSCTGQFDLGITEENCLDCLEKEFLAN
TIGKVVDPGTCPKCRRSAGSRGSSISLYSRSDQVRCRSGSPVYCYGGPFA
GWHSLIATGIVSGSNLGPPCNQRFISCDNSFNGLQLLNQGYLTEPLVASL
STGKTCDEEHLVQALDKLRVPYDRELLHGYFKQLAKRRRTESSVNLKQLL
IQASKQQGNHRKLKRLIEMATHQQLIVQFKGKAADKTEWVPINVRDILNA
WARCRDLSLLQQLDDRFHCANVMGKVGHIVRQATVAASTQAQASSSTSFC
KRTLPEYLMIPQYYMSGVLTLTRKC*

GH15431.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 22:00:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14522-PA 777 GF14522-PA 1..777 6..775 2008 59.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 22:00:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21361-PA 753 GG21361-PA 1..753 6..775 3233 83.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 22:00:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10753-PA 872 GH10753-PA 194..872 126..775 1325 51.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:12:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG3651-PD 770 CG3651-PD 1..770 6..775 3997 100 Plus
CG3651-PC 770 CG3651-PC 1..770 6..775 3997 100 Plus
CG3651-PB 715 CG3651-PB 1..715 61..775 3702 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 22:00:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11606-PA 795 GI11606-PA 135..795 131..775 1316 50.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 22:00:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL25531-PA 745 GL25531-PA 1..745 61..775 1815 59 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 22:00:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA17588-PA 731 GA17588-PA 64..731 114..775 1824 63.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 22:00:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM16158-PA 764 GM16158-PA 1..764 6..775 3728 93.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 22:00:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD24347-PA 764 GD24347-PA 1..764 6..775 3733 93.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 22:00:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12936-PA 629 GJ12936-PA 1..629 148..775 1221 50.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 22:00:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14764-PA 1063 GK14764-PA 303..1063 61..775 1412 48.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 22:00:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12941-PA 761 GE12941-PA 1..761 6..775 3288 81.7 Plus