BDGP Sequence Production Resources |
Search the DGRC for GH15448
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 154 |
Well: | 48 |
Vector: | pOT2 |
Associated Gene/Transcript | bonsai-RA |
Protein status: | GH15448.pep: gold |
Preliminary Size: | 1128 |
Sequenced Size: | 987 |
Gene | Date | Evidence |
---|---|---|
CG4207 | 2001-01-01 | Release 2 assignment |
CG4207 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4207 | 2003-01-13 | Blastp of sequenced clone |
bonsai | 2008-04-29 | Release 5.5 accounting |
bonsai | 2008-08-15 | Release 5.9 accounting |
bonsai | 2008-12-18 | 5.12 accounting |
987 bp (987 high quality bases) assembled on 2003-01-13
GenBank Submission: AY060712
> GH15448.complete GCCAAGTGATATAACCTAGCCAAAATTTGTCCAACAAATAAAAGCCGAAT TAATGAATAAACTGTTGAATATAGCCCAGGCAGGGCATCGGCAGTTTGTC CGGGAATATGCATTCAAGTCGGACCTGAAAATCAAATGGATGCGCCCCGA GAAGATCGCGTGCTATAAGCCCGAAAAGAGCGGCGATTTAGCCAAGCTGC CTCCTCTGAAAGCCGACGAACTGCTGCCGGAATACAGGGACTGCAAGGAG TTGGATAAAGCCGACGAGTCAGTTAAATCCTTGTTCAAACTGAGCAACAA CGCTAGTTACCTGACCACAAAATTCTATCGCGATGAGATGGTCAAGGAGG TGCAAAGACATGCCCAGGATTTCGGCTCAATGGAGGCCAAATTGGCAAAA ATGACTGCAGTTATCCGCCGCTACCAGGAGCACATGGACAAGCATCCGCG CGACAAGATGATCAAGGTGCGTCTCAAGGAGCTCATCGACAAACGCAAGA AGTTCCTCAAGTACTTGAGACGTTGGGATTATCCCCGCTTCGAGTGGATT CTCGAGAAACTCGACCTGGTGTACAAGCCACCGCCCACACATTTCCACTG GATCACCCGCAAGGAATCCCTCCAAAAGTTGACCGACATATACTGCGAAA ACCTAAAGGAAGAGCGGCTAGAGGCTTACCATAAGCAGCTGCAGGCCCAG CAAATACCCTTCCTTGAGGAGGCCATCAAGAAGATGCAGTTCGTGCGGCA GGAACAGATTTCCTGCGATGTCCCCGTGACCGTGACAGAAGAGAAGATCG CCGACTCAAAAAGGCAGCTGGAAATGCTGAAGGAGCTGCAGCAGGCGGAG GCAGCCGCCAGCAGCAAGAAACAAAACGAGGATGGCTTCAATTAGGCCCG ATTCTTTAATGTTACGGTGTCTTACAATAAATGTAAATGCTGGTTTTCTT AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 18524825..18525382 | 393..950 | 2715 | 99.1 | Plus |
chr2R | 21145070 | chr2R | 18524315..18524572 | 1..258 | 1245 | 98.8 | Plus |
chr2R | 21145070 | chr2R | 18524632..18524765 | 259..392 | 670 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 22638311..22638871 | 393..953 | 2805 | 100 | Plus |
2R | 25286936 | 2R | 22637801..22638058 | 1..258 | 1290 | 100 | Plus |
2R | 25286936 | 2R | 22638118..22638251 | 259..392 | 670 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 22639510..22640070 | 393..953 | 2805 | 100 | Plus |
2R | 25260384 | 2R | 22639000..22639257 | 1..258 | 1290 | 100 | Plus |
2R | 25260384 | 2R | 22639317..22639450 | 259..392 | 670 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsil\Loa | 7779 | Dsil\Loa DSV28T24 7779bp AKA(S39346) Derived from X60177 (Rel. 37, Last updated, Version 8). | 3996..4085 | 817..904 | 112 | 60 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 18524315..18524572 | 1..258 | 98 | -> | Plus |
chr2R | 18524632..18524765 | 259..392 | 100 | -> | Plus |
chr2R | 18524825..18525382 | 393..950 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
bonsai-RA | 1..843 | 53..895 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
bonsai-RA | 1..843 | 53..895 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
bonsai-RA | 1..843 | 53..895 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
bonsai-RA | 1..843 | 53..895 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
bonsai-RA | 1..843 | 53..895 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
bonsai-RA | 30..979 | 1..950 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
bonsai-RA | 30..979 | 1..950 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
bonsai-RA | 32..981 | 1..950 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
bonsai-RA | 30..979 | 1..950 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
bonsai-RA | 32..981 | 1..950 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 22637801..22638058 | 1..258 | 100 | -> | Plus |
2R | 22638118..22638251 | 259..392 | 100 | -> | Plus |
2R | 22638311..22638868 | 393..950 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 22637801..22638058 | 1..258 | 100 | -> | Plus |
2R | 22638118..22638251 | 259..392 | 100 | -> | Plus |
2R | 22638311..22638868 | 393..950 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 22637801..22638058 | 1..258 | 100 | -> | Plus |
2R | 22638118..22638251 | 259..392 | 100 | -> | Plus |
2R | 22638311..22638868 | 393..950 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 18525306..18525563 | 1..258 | 100 | -> | Plus |
arm_2R | 18525623..18525756 | 259..392 | 100 | -> | Plus |
arm_2R | 18525816..18526373 | 393..950 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 22639317..22639450 | 259..392 | 100 | -> | Plus |
2R | 22639000..22639257 | 1..258 | 100 | -> | Plus |
2R | 22639510..22640067 | 393..950 | 100 | Plus |
Translation from 52 to 894
> GH15448.pep MNKLLNIAQAGHRQFVREYAFKSDLKIKWMRPEKIACYKPEKSGDLAKLP PLKADELLPEYRDCKELDKADESVKSLFKLSNNASYLTTKFYRDEMVKEV QRHAQDFGSMEAKLAKMTAVIRRYQEHMDKHPRDKMIKVRLKELIDKRKK FLKYLRRWDYPRFEWILEKLDLVYKPPPTHFHWITRKESLQKLTDIYCEN LKEERLEAYHKQLQAQQIPFLEEAIKKMQFVRQEQISCDVPVTVTEEKIA DSKRQLEMLKELQQAEAAASSKKQNEDGFN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11906-PA | 280 | GF11906-PA | 1..280 | 1..280 | 1293 | 86.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21060-PA | 280 | GG21060-PA | 1..280 | 1..280 | 1418 | 95 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21563-PA | 279 | GH21563-PA | 1..279 | 1..280 | 1194 | 78.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
bonsai-PA | 280 | CG4207-PA | 1..280 | 1..280 | 1461 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19535-PA | 279 | GI19535-PA | 1..279 | 1..280 | 1154 | 76.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11592-PA | 280 | GL11592-PA | 1..280 | 1..280 | 1234 | 80 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18031-PA | 280 | GA18031-PA | 1..280 | 1..280 | 1242 | 80.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15929-PA | 280 | GM15929-PA | 1..280 | 1..280 | 1450 | 97.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11682-PA | 280 | GD11682-PA | 1..280 | 1..280 | 1454 | 97.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21104-PA | 279 | GJ21104-PA | 1..279 | 1..280 | 1183 | 78.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17900-PA | 280 | GK17900-PA | 1..280 | 1..280 | 1191 | 77.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE14002-PA | 280 | GE14002-PA | 1..280 | 1..280 | 1411 | 95 | Plus |
Translation from 52 to 894
> GH15448.hyp MNKLLNIAQAGHRQFVREYAFKSDLKIKWMRPEKIACYKPEKSGDLAKLP PLKADELLPEYRDCKELDKADESVKSLFKLSNNASYLTTKFYRDEMVKEV QRHAQDFGSMEAKLAKMTAVIRRYQEHMDKHPRDKMIKVRLKELIDKRKK FLKYLRRWDYPRFEWILEKLDLVYKPPPTHFHWITRKESLQKLTDIYCEN LKEERLEAYHKQLQAQQIPFLEEAIKKMQFVRQEQISCDVPVTVTEEKIA DSKRQLEMLKELQQAEAAASSKKQNEDGFN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
bonsai-PA | 280 | CG4207-PA | 1..280 | 1..280 | 1461 | 100 | Plus |