BDGP Sequence Production Resources |
Search the DGRC for GH15456
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 154 |
Well: | 56 |
Vector: | pOT2 |
Associated Gene/Transcript | pn-RA |
Protein status: | GH15456.pep: gold |
Preliminary Size: | 1794 |
Sequenced Size: | 1766 |
Gene | Date | Evidence |
---|---|---|
CG3461 | 2001-07-04 | Blastp of sequenced clone |
CG3461 | 2003-01-01 | Sim4 clustering to Release 3 |
pn | 2008-04-29 | Release 5.5 accounting |
pn | 2008-08-15 | Release 5.9 accounting |
pn | 2008-12-18 | 5.12 accounting |
1766 bp (1766 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051502
> GH15456.complete ATTACATTACTGCGTTACAAACAAATGCATTATATATGTATTTATATACA TTAAAGCATTATCTTTGTAATTTATTTATTTCAGTTTCGCGCTGATCAAT CGATAAATGTCACATCGAATCGATACGCGCAACTGTTGAAATATATGGAA GCTATCAGCCGTTTGTTTTCCCAGCTTTTCCGAGATTTCCCTAACAAATG TGCTTTCTACGATTTTTGGCCCAGGCCAGGGGCACCTTGGGACGGCATCT GGCGGAGGCCTCACCAGTTGCCTGGGCTGCTGCTCCCGACGTTTCCGGCC GGAAATTACATCTGGTAATGGGCAACGAATCGTGTGACTTGGACTCCGCC GTTTCGGCCGTCACTTTGGCTTTTGTCTACGCGCAGCGTCATCGGGAGCA CGACTATGTACCTATACTGAACATTCCTCGCCGGGACTACCCGTTGAAAA CCGAGGTGGGCCACTTGTTTGTGAAATGTGGGATTGCCGAGCCCGTGTTG CTCTTCCGAGACGATATTCCCCGGGAAGTGGTCCAGGATGTGAACGTTAT TCTCGTGGACCACCATGTAAGCCCGCTGGCGCCAAATGTTACTGAAATTT TGGATCACAGGCCCTTGGAGGACAGCAGTCCATCCTTCAAGCAGCTGCCA ACACTCTGCCAACTGGACATAGATGCCTCGGTGGGTTCCTGCGCCACTCT GGTGGCCCAGCGGTATTTGGCAGAGGACCAACCCCGATCCACTAGCGTGG CCCAGCTGCTGCACGCCACCATCGTGCTGGACACAATTAATTTTGCACCC GCGGCCAAGCGCTACGGGCCAAAGGACGAAGCCATGGTACAGAAGTTGGA GAGCGAGCTTAACCGTAAGGACGCTCAAAGAAGTAGCCTTTTTGATGAGC TAGTGGCTGCAAGGGCTGATATTAGTAAGCTAACTCTCACCGAAGTTTTG CGCAAGGATATGAAGGTCTTGCAAACCGATCGTCAGGTGGTTCCCTTAGC TGGAATGCCCATCCTAGTCAGAGATTTTGTGGAGAAAAGCGGCGCCGAAA AAGCCGTTCGCGAGTTTGGCGTGGAGAGTAACCTTTTGGTTATCCTGGGA ATGTATGTATCACCTGCCGATGGCCAGGTGCAGCGTGACCTGGCCTTGAT CTCTCTCTCCGGCCAAGGCCAATTCGTTCAACGCGTCCAGCAAGCACTGA TGGAGTCTAACGATCCAAAATTGGAGTTGCGACCTCACGAGGTGGACACC CGCTTTATGGGCGGCTGCTTCTTGCGCCAACACAACGTCCAGGCCACCAG AAAGCACATCCTGCCCATTGTTAAGCGAGCGCTGCTTGAATGGGAAGCGG ATCACGCCTGCGATTGTGACGAGGTGTACTTCTTCAAGGAGAAGCCGCAG CTGGGACTCTCTTAAGAAGAGATCAGGCCAAACGGAAGCTTAGACAAGAC TTAGCTATAATTTTAGCGCAACCGTTATGTTACCAACGTTAAGCTTACAC CAAAAAGACATAGCGAATTTCCCATTTACGATAAATTGACGAAGGCAAGC GAGTGAAATATGGAAGCAATCAGTATTCCAAATTTAAGTTACTTTGCAAC CTTGGTAACATAAAGGCAAATTAGTTTCAGAGTATTCACACATTAAGCTC TATCCAGTTTCCTAGTTGTTTATATGGATTAAGCGATTATGTACAGGGTA TACATGGGTAAAAGAAAGCGTTATGATTAATAAAAAAAAGGACTACAAAA AAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 2075032..2075276 | 1..245 | 100 | -> | Plus |
chrX | 2075345..2076845 | 246..1746 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pn-RA | 1..1218 | 198..1415 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pn-RA | 1..1218 | 198..1415 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pn-RA | 1..1218 | 198..1415 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pn-RA | 1..1218 | 198..1415 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pn-RA | 1..1218 | 198..1415 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pn-RA | 10..1755 | 1..1746 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pn-RA | 10..1755 | 1..1746 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pn-RA | 1..1638 | 109..1746 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pn-RA | 10..1755 | 1..1746 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pn-RA | 1..1638 | 109..1746 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2181103..2181347 | 1..245 | 100 | -> | Plus |
X | 2181416..2182916 | 246..1746 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2181103..2181347 | 1..245 | 100 | -> | Plus |
X | 2181416..2182916 | 246..1746 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2181103..2181347 | 1..245 | 100 | -> | Plus |
X | 2181416..2182916 | 246..1746 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 2075136..2075380 | 1..245 | 100 | -> | Plus |
arm_X | 2075449..2076949 | 246..1746 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2189201..2189445 | 1..245 | 100 | -> | Plus |
X | 2189514..2191014 | 246..1746 | 99 | Plus |
Translation from 197 to 1414
> GH15456.pep MCFLRFLAQARGTLGRHLAEASPVAWAAAPDVSGRKLHLVMGNESCDLDS AVSAVTLAFVYAQRHREHDYVPILNIPRRDYPLKTEVGHLFVKCGIAEPV LLFRDDIPREVVQDVNVILVDHHVSPLAPNVTEILDHRPLEDSSPSFKQL PTLCQLDIDASVGSCATLVAQRYLAEDQPRSTSVAQLLHATIVLDTINFA PAAKRYGPKDEAMVQKLESELNRKDAQRSSLFDELVAARADISKLTLTEV LRKDMKVLQTDRQVVPLAGMPILVRDFVEKSGAEKAVREFGVESNLLVIL GMYVSPADGQVQRDLALISLSGQGQFVQRVQQALMESNDPKLELRPHEVD TRFMGGCFLRQHNVQATRKHILPIVKRALLEWEADHACDCDEVYFFKEKP QLGLS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22198-PA | 405 | GF22198-PA | 1..405 | 1..405 | 1674 | 75.8 | Plus |
Dana\GF20340-PA | 438 | GF20340-PA | 14..409 | 17..392 | 417 | 31.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12916-PA | 405 | GG12916-PA | 1..405 | 1..405 | 2009 | 93.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17810-PA | 407 | GH17810-PA | 1..407 | 1..405 | 1399 | 65.1 | Plus |
Dgri\GH12833-PA | 399 | GH12833-PA | 34..394 | 37..382 | 378 | 31.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
pn-PA | 405 | CG3461-PA | 1..405 | 1..405 | 2070 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11044-PA | 421 | GI11044-PA | 1..421 | 1..405 | 1277 | 60 | Plus |
Dmoj\GI14915-PA | 404 | GI14915-PA | 34..397 | 37..384 | 434 | 32.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13325-PA | 262 | GL13325-PA | 3..262 | 150..405 | 925 | 65.8 | Plus |
Dper\GL13324-PA | 124 | GL13324-PA | 1..111 | 1..111 | 414 | 66.7 | Plus |
Dper\GL13101-PA | 422 | GL13101-PA | 32..411 | 26..388 | 315 | 28.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17466-PA | 409 | GA17466-PA | 1..409 | 1..405 | 1475 | 66 | Plus |
Dpse\GA23059-PA | 425 | GA23059-PA | 32..414 | 26..388 | 281 | 29.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19207-PA | 405 | GM19207-PA | 1..405 | 1..405 | 2109 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16595-PA | 131 | GD16595-PA | 1..108 | 1..108 | 526 | 91.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15824-PA | 422 | GJ15824-PA | 2..422 | 9..405 | 1344 | 62.1 | Plus |
Dvir\GJ18950-PA | 395 | GJ18950-PA | 1..389 | 1..385 | 423 | 31.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16048-PA | 379 | GK16048-PA | 1..379 | 1..390 | 1210 | 59 | Plus |
Dwil\GK25312-PA | 369 | GK25312-PA | 1..366 | 37..385 | 405 | 31.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16244-PA | 405 | GE16244-PA | 1..405 | 1..405 | 2055 | 95.8 | Plus |
Translation from 197 to 1414
> GH15456.hyp MCFLRFLAQARGTLGRHLAEASPVAWAAAPDVSGRKLHLVMGNESCDLDS AVSAVTLAFVYAQRHREHDYVPILNIPRRDYPLKTEVGHLFVKCGIAEPV LLFRDDIPREVVQDVNVILVDHHVSPLAPNVTEILDHRPLEDSSPSFKQL PTLCQLDIDASVGSCATLVAQRYLAEDQPRSTSVAQLLHATIVLDTINFA PAAKRYGPKDEAMVQKLESELNRKDAQRSSLFDELVAARADISKLTLTEV LRKDMKVLQTDRQVVPLAGMPILVRDFVEKSGAEKAVREFGVESNLLVIL GMYVSPADGQVQRDLALISLSGQGQFVQRVQQALMESNDPKLELRPHEVD TRFMGGCFLRQHNVQATRKHILPIVKRALLEWEADHACDCDEVYFFKEKP QLGLS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
pn-PA | 405 | CG3461-PA | 1..405 | 1..405 | 2070 | 100 | Plus |