Clone GH15472 Report

Search the DGRC for GH15472

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:154
Well:72
Vector:pOT2
Associated Gene/TranscriptCG8931-RA
Protein status:GH15472.pep: gold
Preliminary Size:1487
Sequenced Size:1451

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG8931 2001-07-04 Blastp of sequenced clone
CG8931 2003-01-01 Sim4 clustering to Release 3
CG8931 2008-04-29 Release 5.5 accounting
CG8931 2008-08-15 Release 5.9 accounting
CG8931 2008-12-18 5.12 accounting

Clone Sequence Records

GH15472.complete Sequence

1451 bp (1451 high quality bases) assembled on 2001-07-04

GenBank Submission: AY051504

> GH15472.complete
ATTGTTCCAATTATACTTCAAAACAATTGGATATTATGTTTAAAACACCA
CCCAGTCCTGCCTGAAAATAGTTAATAATATAAATATCCAACTAGCAAAG
AAGACGAAAAGTTATGGCGGGAATGAATGAGTACTCTAGCCTAAAATTTC
AAGCGGAGTATGAAACGCACGATGATCACCTGGGCAAGGAGCATCGGACT
GGGGACCGGGATCAACATTTACCCGTGACCTATGGCCCTAGCAAACACTT
GGGAAGCAGCCTTGAAGAGCGCGAGAAGGCGATTGTGGACGTCGTCGGCG
TACAGTGGGTCTCCCTGGTCACCGAGAACCTGCTTAGCCATCCGTTTGTG
GTGCTGCGCCGCCAGTGCCAGGTGTACAATGCCTCGAGACGCTATCATTT
GCATCCCTTTCAGCTTCTGCCCAGCATCGTCCACCTGCACAGAAGGCAGG
GACTGACGACCCTGTGGAAGGGCGTGGGCAGCTGCCTACTGGTGCGCGGC
ATGACGCTGGCCATCGACGACTTTATCTCGAAGGTGACCAGCTGGCCCAA
GGATGTGAATAGTCGCACCACGCTAAAGCGTTTCGGACAGCATCTCCTGC
TCAAATGCATAAGTATCGGCCTGGTGGTGCCCTTCTATGCAGCTTCTCTC
GTCGAAACGGTGCAGAGTGATATTGCCAGCGAGAAACCCGGTCTATTCGA
TGTATTCCGGGAGGGAAGTCTGCGCTTGTTTTATTGGAGCTCTCCGCAAA
AGGGCCGTATGCTACCAGCCTGGGCTCTAATCGGGCCAAGTGTCTCCTTT
GGCATCACCAAGTATCTGTTTAATCTCGTGATACGGGGCGTGTCCTCACG
CATAATGCGGCTTCGTATAAAGAATTCCCAGGACGGCCAGGGTGGAAAGT
ATCAGGACACCACGCTGGAACAACAGAATGCGGACATCTATGCCAGCCTT
ATTGCTATCATAACCACTGAGGTCATGTTCTTCCCGTTCGAAACGATTCT
ACACCGTCTGCAATTGCAGGGAACACGAACTATAATCGACAACCTCGACA
ATGGCTACGATGTCGTACCCATTCTAACAAACTATCAAGGAGTCGTCGAT
TGCTATCAGACAACGATTGTCTCCGAGGGAGTTAGTGGCCTCTACAAGGG
CTTTGGAGCCATGATCCTGCAGTTTGCGGCACACGTGGCCGTCATCAAAT
TGACCAAATGGGTTGTGAATCAAATCGTAGAGGTCATCTCCAACCGACCA
CCACAGCGAATAGTGAATTACTATAATCTGGATGAGAATGCTTGCAACTC
CAGGTCCACGACCTTGTCGCCAAGCCTTTCCAGTACCGAAATGGGGGAGA
TTAGTCTTGGGCAGAATTCACAAGACTAGTTAATGGCTAGTCAAATTATA
TTGCATATGTAAATTATACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
A

GH15472.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:35:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG8931-RA 1564 CG8931-RA 34..1455 1..1422 7110 100 Plus
CG5755-RA 1499 CG5755-RA 395..739 291..635 360 73.6 Plus
CG5755-RA 1499 CG5755-RA 1009..1134 914..1039 150 74.6 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 17:21:32
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 15874430..15875242 607..1419 4065 100 Plus
chrX 22417052 chrX 15874025..15874375 257..607 1755 100 Plus
chrX 22417052 chrX 15873644..15873788 1..145 725 100 Plus
chrX 22417052 chrX 15873851..15873964 146..259 570 100 Plus
chr2L 23010047 chr2L 18095626..18096193 291..858 425 71.7 Plus
chr2L 23010047 chr2L 18096240..18096537 914..1211 230 71.8 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:54:09 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 17:21:30
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15984593..15985408 607..1422 4080 100 Plus
X 23542271 X 15984188..15984538 257..607 1755 100 Plus
X 23542271 X 15983807..15983951 1..145 725 100 Plus
X 23542271 X 15984014..15984127 146..259 570 100 Plus
2L 23513712 2L 18096962..18097529 291..858 425 71.7 Plus
2L 23513712 2L 18097576..18097873 914..1211 230 71.8 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:57:33
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 15992691..15993506 607..1422 4080 100 Plus
X 23527363 X 15992286..15992636 257..607 1755 100 Plus
X 23527363 X 15991905..15992049 1..145 725 100 Plus
X 23527363 X 15992112..15992225 146..259 570 100 Plus
2L 23513712 2L 18096962..18097306 291..635 360 73.6 Plus
2L 23513712 2L 18097576..18097701 914..1039 150 74.6 Plus
Blast to na_te.dros performed on 2019-03-15 17:21:30 has no hits.

GH15472.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 17:22:45 Download gff for GH15472.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 15873851..15873964 146..259 100 -> Plus
chrX 15873644..15873788 1..145 100 -> Plus
chrX 15874028..15874375 260..607 100 -> Plus
chrX 15874431..15875242 608..1419 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:44:37 Download gff for GH15472.complete
Subject Subject Range Query Range Percent Splice Strand
CG8931-RA 1..1266 114..1379 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:26:23 Download gff for GH15472.complete
Subject Subject Range Query Range Percent Splice Strand
CG8931-RA 1..1266 114..1379 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:32:54 Download gff for GH15472.complete
Subject Subject Range Query Range Percent Splice Strand
CG8931-RA 1..1266 114..1379 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:59:32 Download gff for GH15472.complete
Subject Subject Range Query Range Percent Splice Strand
CG8931-RA 1..1266 114..1379 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:34:24 Download gff for GH15472.complete
Subject Subject Range Query Range Percent Splice Strand
CG8931-RA 1..1266 114..1379 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:25:20 Download gff for GH15472.complete
Subject Subject Range Query Range Percent Splice Strand
CG8931-RA 34..1452 1..1419 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:26:23 Download gff for GH15472.complete
Subject Subject Range Query Range Percent Splice Strand
CG8931-RA 34..1452 1..1419 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:32:54 Download gff for GH15472.complete
Subject Subject Range Query Range Percent Splice Strand
CG8931-RA 36..1454 1..1419 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:59:32 Download gff for GH15472.complete
Subject Subject Range Query Range Percent Splice Strand
CG8931-RA 34..1452 1..1419 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:34:24 Download gff for GH15472.complete
Subject Subject Range Query Range Percent Splice Strand
CG8931-RA 36..1454 1..1419 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:22:45 Download gff for GH15472.complete
Subject Subject Range Query Range Percent Splice Strand
X 15983807..15983951 1..145 100 -> Plus
X 15984014..15984127 146..259 100 -> Plus
X 15984191..15984538 260..607 100 -> Plus
X 15984594..15985405 608..1419 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:22:45 Download gff for GH15472.complete
Subject Subject Range Query Range Percent Splice Strand
X 15983807..15983951 1..145 100 -> Plus
X 15984014..15984127 146..259 100 -> Plus
X 15984191..15984538 260..607 100 -> Plus
X 15984594..15985405 608..1419 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:22:45 Download gff for GH15472.complete
Subject Subject Range Query Range Percent Splice Strand
X 15983807..15983951 1..145 100 -> Plus
X 15984014..15984127 146..259 100 -> Plus
X 15984191..15984538 260..607 100 -> Plus
X 15984594..15985405 608..1419 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:32:54 Download gff for GH15472.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 15877840..15877984 1..145 100 -> Plus
arm_X 15878047..15878160 146..259 100 -> Plus
arm_X 15878224..15878571 260..607 100 -> Plus
arm_X 15878627..15879438 608..1419 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:37:20 Download gff for GH15472.complete
Subject Subject Range Query Range Percent Splice Strand
X 15992289..15992636 260..607 100 -> Plus
X 15992692..15993503 608..1419 100   Plus
X 15991905..15992049 1..145 100 -> Plus
X 15992112..15992225 146..259 100 -> Plus

GH15472.pep Sequence

Translation from 113 to 1378

> GH15472.pep
MAGMNEYSSLKFQAEYETHDDHLGKEHRTGDRDQHLPVTYGPSKHLGSSL
EEREKAIVDVVGVQWVSLVTENLLSHPFVVLRRQCQVYNASRRYHLHPFQ
LLPSIVHLHRRQGLTTLWKGVGSCLLVRGMTLAIDDFISKVTSWPKDVNS
RTTLKRFGQHLLLKCISIGLVVPFYAASLVETVQSDIASEKPGLFDVFRE
GSLRLFYWSSPQKGRMLPAWALIGPSVSFGITKYLFNLVIRGVSSRIMRL
RIKNSQDGQGGKYQDTTLEQQNADIYASLIAIITTEVMFFPFETILHRLQ
LQGTRTIIDNLDNGYDVVPILTNYQGVVDCYQTTIVSEGVSGLYKGFGAM
ILQFAAHVAVIKLTKWVVNQIVEVISNRPPQRIVNYYNLDENACNSRSTT
LSPSLSSTEMGEISLGQNSQD*

GH15472.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:54:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20510-PA 403 GF20510-PA 29..389 43..395 1433 72.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:54:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG17937-PA 422 GG17937-PA 1..422 1..421 1884 88.2 Plus
Dere\GG21106-PA 451 GG21106-PA 2..450 6..421 1290 58.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:54:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH17876-PA 477 GH17876-PA 79..477 26..421 1596 77.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:15:20
Subject Length Description Subject Range Query Range Score Percent Strand
Slc25A46a-PA 421 CG8931-PA 1..421 1..421 2181 100 Plus
Slc25A46b-PA 450 CG5755-PA 2..449 6..421 1285 57.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:54:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI16446-PA 478 GI16446-PA 94..478 44..421 1560 78.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:54:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL13166-PA 374 GL13166-PA 15..372 60..419 1460 78.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:54:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA21417-PB 433 GA21417-PB 74..431 60..419 1468 78.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:54:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17264-PA 450 GM17264-PA 2..449 6..421 1332 57.1 Plus
Dsec\GM11677-PA 194 GM11677-PA 1..194 216..421 879 88.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:54:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD17260-PA 395 GD17260-PA 1..395 1..421 1797 83.8 Plus
Dsim\GD24129-PA 450 GD24129-PA 2..449 6..421 1332 56.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:54:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ15846-PA 436 GJ15846-PA 38..436 26..421 1623 79.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:54:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK10284-PA 473 GK10284-PA 1..473 1..421 1629 69.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:54:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE17242-PA 420 GE17242-PA 1..419 1..419 1812 85.5 Plus
Dyak\GE12812-PA 450 GE12812-PA 91..449 60..421 1368 70.7 Plus

GH15472.hyp Sequence

Translation from 113 to 1378

> GH15472.hyp
MAGMNEYSSLKFQAEYETHDDHLGKEHRTGDRDQHLPVTYGPSKHLGSSL
EEREKAIVDVVGVQWVSLVTENLLSHPFVVLRRQCQVYNASRRYHLHPFQ
LLPSIVHLHRRQGLTTLWKGVGSCLLVRGMTLAIDDFISKVTSWPKDVNS
RTTLKRFGQHLLLKCISIGLVVPFYAASLVETVQSDIASEKPGLFDVFRE
GSLRLFYWSSPQKGRMLPAWALIGPSVSFGITKYLFNLVIRGVSSRIMRL
RIKNSQDGQGGKYQDTTLEQQNADIYASLIAIITTEVMFFPFETILHRLQ
LQGTRTIIDNLDNGYDVVPILTNYQGVVDCYQTTIVSEGVSGLYKGFGAM
ILQFAAHVAVIKLTKWVVNQIVEVISNRPPQRIVNYYNLDENACNSRSTT
LSPSLSSTEMGEISLGQNSQD*

GH15472.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 08:01:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG8931-PA 421 CG8931-PA 1..421 1..421 2181 100 Plus
CG5755-PA 450 CG5755-PA 2..449 6..421 1285 57.8 Plus