BDGP Sequence Production Resources |
Search the DGRC for GH15549
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 155 |
Well: | 49 |
Vector: | pOT2 |
Associated Gene/Transcript | CG18809-RA |
Protein status: | GH15549.pep: gold |
Preliminary Size: | 2661 |
Sequenced Size: | 2922 |
Gene | Date | Evidence |
---|---|---|
CG18809 | 2001-01-01 | Release 2 assignment |
CG14235 | 2001-01-01 | Release 2 assignment |
CG18809 | 2001-07-04 | Blastp of sequenced clone |
CG14235 | 2003-01-01 | Sim4 clustering to Release 3 |
CG18809 | 2008-04-29 | Release 5.5 accounting |
CG18809 | 2008-08-15 | Release 5.9 accounting |
CG14235 | 2008-08-15 | Release 5.9 accounting |
CG18809 | 2008-12-18 | 5.12 accounting |
CG14235 | 2008-12-18 | 5.12 accounting |
2922 bp (2922 high quality bases) assembled on 2001-07-04
GenBank Submission: AY060308
> GH15549.complete TTTGATGAGGGGCGGGCCGGGTCTGCATCTTCCTGCGTAAGTTGGCCCCC ACCAAATGGATCCGTAACCGAATGGGCGTACGGATCCCCAGGGTTACATA AGTCACCGCCCGCCACCGAGGGGTTGCAACGGAAAGCGAACAGAAACAGT CCCCTTAACGTAGCCACTATTTTGTAGCCAGAAAGAAAACTCAACTCAAA TCAGATCAGATCAAACCCCCTGCACAGCGCGTCCTGGTTCGAGTAACGTT TTGTATTCATGCGTTCAAGTCATTTTTCCATGCAGGCGAATCCGAAAATC CGATACGTTTCAGAGTCGCAAACAGTCAAGAGTTAAGCACAAATCGCCAC TAAAAGCTAAAAGGCTAACAAGCTGAATCGCACTGATTCGCACGTAGCCA GCCAAACGGAAGGACTCCTCCGCATCCACAGCAGCAGCAACGGCGAGCAG CACGAACAACATCCACGGATGATAACGTAACGTAGCCGCAACGTTGGAGC AACACCACCTTCCACATCCACTTCCACCGCAGCGGACATCGCAAACAAAT CATCACTACATCCACACCCGACATGTCGGCGGCCCGCCTGCCCTACTATC AGCGGGATCAGGAGGACGGCCACCAGCGGCGCGCCGCACGCGGCCATCAG CGCGGCTACTACGAGCGTGGCTCTGGTTCCGGATCCTCCAGACGAGAGCA CAGTCGCTACAGTCGCAGCCGTTCGCGTTCCCGCAGTCGCAGCCGCTCCG CCGAACGCTTTGGCCAGCGTCGCCGCCACCAGAAACGGCAGTCATCCCGT TACCACAGAGACCGCGACTCCAGAGATCGCTCCCGAGATCGCTCCCGAGA TCGCTCTAGGGATCGCGAACGTGATCGCGATAGGGACCACTCAAGGCGCT CCAGCCACTATCGACGCTCGGAATCGCCGTCCTCTTCTGACATTGGCCAT GGATCCAACAACAGTCAACGAAGAGGCCACCATGCATCATCATCCAGTAA ATCGGAGCTAAGCGCCGTACAGAAGGCAGCCGCTGCAGCTGCCGCCGCCA CAAATCAAGTCCAGTTGGCTGGCAAGAGCAGTGCCGCGTCCGCGGTGGGC GCCTACTACAACCTGGACACCGACGAGCCCTTTGACAAGGAGCGCATCCA CCGCGAAATGGAGCAGAAGCTGCGCGAAGCACTGGCCAGGGAGGGCAAAG TGTATCCGCCGCCAAAGCCTGAGCCACCATCGCATCCTGTCTTCGCCAAC GACGGCTCGTTCATGGAGCTGTTTAAGAAGATGCAGGAGGGCCAAAAGCA GCAAGCGACCAGCCAGTTGATGCAGCCATCGGTCAAAGAGGTCCTGCAGC AGCAGTTGGTTCCGCCGGAGGCGGCCTCCACAGGGCCTGCACTGCCGGCC ATTGCATTGGGAGCTGCCAGCAGTGCTGCGGCGCCGTACATTGCTGCCGC GGCGGCCGGAAAGCTGGCGCCGCCGCCACCCATCGTGGGACGACGTCGCG GCGGAAAAGTTCTCAAAACTGGCGTAGTGGCCAAAGTGAAGACGCCCAAT GAGAGCGACGTGGACCCGAAGGACTTCTGGTCGTTGTACCTGGCCGAGGT CAACAAGTACAAGAGCAACGCCTGCGATACGGACAACGGCAAGCGGCCGC TGGTCAAGTAGTCGCCGAAATAGTCGCGCTTTCCATAGAAACATGAACTT GAACGCAAAAAGAGCGAGAAACGTATACTGCCCAGACGCAGTACTGCAGA TTCGATTTTGATTCGACCATACCCCTGTTCCCGAGACACCATCACATAGC GATCCCTTCCCGGCCCCTTTGAAATGTTTTGTACACGAAAACAAGCGAGC AGAGATGCGTAGCTTATAGTTTTAGTCGAGAGTGGGTGGGCTTATGAGCT GCAAGCGCGAGCAGTGTAATTTGTATTTTTTTCACACGAATCGATATAAT ATAATATAATATGATATATACCGCTCATTAAGCAAACGCAAACTGAAGAA CTAACCATTGTGATTTATATATCTATCTCTTCCTTCCCGTTTATGCACTG AAATTGTATTTACGTTTGATTTCGATTCGGTTGTGTACCGCCTCACATCC CATCCCACCCCATTGTGTTCATCTCTTTCTTTTTCATTTGGACAACGATC CATCTGTCCCGGTCTTCGTTTTGGTTTACTATTTGGTTGCCTTACCGTTT CGTTTCGTTATGTTTTTATTTTCCTTTGCCAACTAAAGTCTATATGCAAT TTTTCATGTCCAAAAACAAAAGCAGCGACAAATCGTCAGACAGCAGCAAC ATGTCCGCCTACAAGCTGGAGACCGCCCCGTTCGACCCACGGTTCCCTAA CCAGAACGTGACCCGCTACTGCTACCAGTCGTACATCGACTTCCACCGCT GCCAGAAGAAGCGCGGCGAGGACTTCGCGCCCTGCAACTACTTCCAGAAG GTCTACAAGTCGATGTGCCCCAACGCCTGGGTGGAGAAGTGGGACGACCA GCGCGAGAGCGGCACATTCCCCGGCCGCATCTAAGCTGCGCCAGAGACGC AGCAACACAGTAAACCCAGCAATCCAGCACCCAAACACACAGGACACGAT CGATGGACGGACGGAGGTAGAGGAGCGTGGTAACCAGAATCCGGCAATTG CAACAGAGACTAGTTTGTGTTTGTGCTTTCCCCAGCGGTGAATGCAGACC ATCATCGGCAAATACAAAAAAAAAATACACAAATGTTCAATTACTTGAAT TCTGAACCGATCGTTTGTGTTTGTTTCTTCTTGATCCTTGATCCTTGATC CTTGATTCTTGGTCCTGCCGTTGCTGGCCGAACTGGCATCCGAATCAGAT CGACGCCACGCCACTGTATTCCGATGTGTTATTATTAATAAACAATTAGA CACAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG18809-RB | 1453 | CG18809-RB | 76..1453 | 284..1661 | 6890 | 100 | Plus |
CG18809-RA | 1466 | CG18809-RA | 354..1466 | 549..1661 | 5565 | 100 | Plus |
CG14235-RA | 738 | CG14235-RA | 74..738 | 2235..2898 | 3285 | 99.8 | Plus |
CG18809-RA | 1466 | CG18809-RA | 76..340 | 284..548 | 1325 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6767..6920 | 399..562 | 155 | 62 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6725..6911 | 399..583 | 154 | 57.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6725..6870 | 420..564 | 151 | 58.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6800..6914 | 420..533 | 132 | 62.2 | Plus |
R1A1-element | 5356 | R1A1-element DMRER1DM 5356bp Derived from X51968 (g8429) (Rel. 23, Last updated, Version 1). | 590..706 | 2284..2404 | 118 | 59 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 19629240..19631603 | 549..2903 | 95 | <- | Minus |
chrX | 19632155..19632702 | 1..548 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18809-RB | 1..1089 | 573..1661 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18809-RB | 1..1089 | 573..1661 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18809-RB | 1..1089 | 573..1661 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18809-RB | 1..1089 | 573..1661 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18809-RB | 1..1089 | 573..1661 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18809-RB | 73..1453 | 279..1661 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18809-RB | 73..1453 | 279..1661 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18809-RB | 73..2009 | 279..2217 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18809-RB | 73..1453 | 279..1661 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18809-RB | 70..2006 | 279..2217 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19740537..19742892 | 549..2903 | 99 | <- | Minus |
X | 19743444..19743991 | 1..548 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19740537..19742892 | 549..2903 | 99 | <- | Minus |
X | 19743444..19743991 | 1..548 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19740537..19742892 | 549..2903 | 99 | <- | Minus |
X | 19743444..19743991 | 1..548 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 19634570..19636925 | 549..2903 | 99 | <- | Minus |
arm_X | 19637477..19638024 | 1..548 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19748635..19750990 | 549..2903 | 99 | <- | Minus |
X | 19751542..19752089 | 1..548 | 100 | Minus |
Translation from 572 to 1660
> GH15549.pep MSAARLPYYQRDQEDGHQRRAARGHQRGYYERGSGSGSSRREHSRYSRSR SRSRSRSRSAERFGQRRRHQKRQSSRYHRDRDSRDRSRDRSRDRSRDRER DRDRDHSRRSSHYRRSESPSSSDIGHGSNNSQRRGHHASSSSKSELSAVQ KAAAAAAAATNQVQLAGKSSAASAVGAYYNLDTDEPFDKERIHREMEQKL REALAREGKVYPPPKPEPPSHPVFANDGSFMELFKKMQEGQKQQATSQLM QPSVKEVLQQQLVPPEAASTGPALPAIALGAASSAAAPYIAAAAAGKLAP PPPIVGRRRGGKVLKTGVVAKVKTPNESDVDPKDFWSLYLAEVNKYKSNA CDTDNGKRPLVK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20465-PA | 393 | GF20465-PA | 123..249 | 110..237 | 307 | 68.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18025-PA | 360 | GG18025-PA | 1..360 | 1..362 | 1033 | 86.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17816-PA | 406 | GH17816-PA | 101..406 | 87..362 | 605 | 58.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG18809-PD | 362 | CG18809-PD | 1..362 | 1..362 | 1858 | 100 | Plus |
CG18809-PC | 362 | CG18809-PC | 1..362 | 1..362 | 1858 | 100 | Plus |
CG18809-PB | 362 | CG18809-PB | 1..362 | 1..362 | 1858 | 100 | Plus |
CG18809-PA | 362 | CG18809-PA | 1..362 | 1..362 | 1858 | 100 | Plus |
Caper-PB | 594 | CG11266-PB | 42..163 | 24..144 | 187 | 38.9 | Plus |
Caper-PA | 594 | CG11266-PA | 42..163 | 24..144 | 187 | 38.9 | Plus |
CG6695-PB | 715 | CG6695-PB | 408..554 | 12..160 | 166 | 34.4 | Plus |
CG6695-PA | 961 | CG6695-PA | 408..554 | 12..160 | 166 | 34.4 | Plus |
Xe7-PD | 777 | CG2179-PD | 596..777 | 9..149 | 164 | 31.7 | Plus |
B52-PN | 350 | CG10851-PN | 191..333 | 32..173 | 162 | 34.7 | Plus |
B52-PC | 350 | CG10851-PC | 191..333 | 32..173 | 162 | 34.7 | Plus |
B52-PA | 350 | CG10851-PA | 191..333 | 32..173 | 162 | 34.7 | Plus |
B52-PO | 355 | CG10851-PO | 196..338 | 32..173 | 162 | 34.7 | Plus |
B52-PM | 355 | CG10851-PM | 196..338 | 32..173 | 162 | 34.7 | Plus |
Xe7-PD | 777 | CG2179-PD | 575..738 | 25..201 | 162 | 31.8 | Plus |
CG4887-PB | 1004 | CG4887-PB | 140..250 | 8..133 | 162 | 38.1 | Plus |
CG4887-PA | 1004 | CG4887-PA | 140..250 | 8..133 | 162 | 38.1 | Plus |
Ctr9-PA | 1150 | CG2469-PA | 1002..1150 | 12..151 | 162 | 34.9 | Plus |
Ctr9-PB | 1150 | CG2469-PB | 1002..1150 | 12..151 | 162 | 34.9 | Plus |
ytr-PB | 194 | CG18426-PB | 5..184 | 32..208 | 161 | 31 | Plus |
ytr-PA | 194 | CG18426-PA | 5..184 | 32..208 | 161 | 31 | Plus |
B52-PN | 350 | CG10851-PN | 185..325 | 14..144 | 161 | 36.9 | Plus |
B52-PC | 350 | CG10851-PC | 185..325 | 14..144 | 161 | 36.9 | Plus |
B52-PA | 350 | CG10851-PA | 185..325 | 14..144 | 161 | 36.9 | Plus |
B52-PO | 355 | CG10851-PO | 190..330 | 14..144 | 161 | 36.9 | Plus |
B52-PM | 355 | CG10851-PM | 190..330 | 14..144 | 161 | 36.9 | Plus |
snRNP-U1-70K-PC | 448 | CG8749-PC | 252..354 | 16..130 | 159 | 35.7 | Plus |
snRNP-U1-70K-PA | 448 | CG8749-PA | 252..354 | 16..130 | 159 | 35.7 | Plus |
CG6695-PA | 961 | CG6695-PA | 832..945 | 34..135 | 157 | 38.3 | Plus |
CG31211-PA | 874 | CG31211-PA | 710..851 | 33..144 | 156 | 36.2 | Plus |
CG31211-PB | 893 | CG31211-PB | 729..870 | 33..144 | 156 | 36.2 | Plus |
CG8108-PA | 919 | CG8108-PA | 19..162 | 8..142 | 154 | 32.2 | Plus |
CG8108-PB | 919 | CG8108-PB | 19..162 | 8..142 | 154 | 32.2 | Plus |
CG11808-PA | 219 | CG11808-PA | 2..81 | 79..160 | 153 | 39 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16426-PA | 336 | GI16426-PA | 136..336 | 164..362 | 599 | 72.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14817-PA | 130 | GL14817-PA | 32..130 | 264..362 | 343 | 84.8 | Plus |
Dper\GL12639-PA | 276 | GL12639-PA | 15..276 | 26..362 | 287 | 34.3 | Plus |
Dper\GL14815-PA | 213 | GL14815-PA | 154..212 | 155..213 | 238 | 78 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15089-PA | 375 | GA15089-PA | 164..375 | 155..362 | 695 | 74.5 | Plus |
Dpse\GA23822-PA | 274 | GA23822-PA | 61..274 | 93..362 | 326 | 37.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22708-PA | 377 | GM22708-PA | 133..377 | 117..362 | 863 | 95.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15829-PA | 394 | GJ15829-PA | 194..394 | 168..362 | 605 | 76.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15854-PA | 409 | GK15854-PA | 176..409 | 162..362 | 603 | 67.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17354-PA | 370 | GE17354-PA | 1..370 | 1..362 | 947 | 86.1 | Plus |
Translation from 572 to 1660
> GH15549.hyp MSAARLPYYQRDQEDGHQRRAARGHQRGYYERGSGSGSSRREHSRYSRSR SRSRSRSRSAERFGQRRRHQKRQSSRYHRDRDSRDRSRDRSRDRSRDRER DRDRDHSRRSSHYRRSESPSSSDIGHGSNNSQRRGHHASSSSKSELSAVQ KAAAAAAAATNQVQLAGKSSAASAVGAYYNLDTDEPFDKERIHREMEQKL REALAREGKVYPPPKPEPPSHPVFANDGSFMELFKKMQEGQKQQATSQLM QPSVKEVLQQQLVPPEAASTGPALPAIALGAASSAAAPYIAAAAAGKLAP PPPIVGRRRGGKVLKTGVVAKVKTPNESDVDPKDFWSLYLAEVNKYKSNA CDTDNGKRPLVK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG18809-PD | 362 | CG18809-PD | 1..362 | 1..362 | 1858 | 100 | Plus |
CG18809-PC | 362 | CG18809-PC | 1..362 | 1..362 | 1858 | 100 | Plus |
CG18809-PB | 362 | CG18809-PB | 1..362 | 1..362 | 1858 | 100 | Plus |
CG18809-PA | 362 | CG18809-PA | 1..362 | 1..362 | 1858 | 100 | Plus |
Caper-PB | 594 | CG11266-PB | 42..163 | 24..144 | 187 | 38.9 | Plus |