Clone GH15768 Report

Search the DGRC for GH15768

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:157
Well:68
Vector:pOT2
Associated Gene/TranscriptCG7742-RA
Protein status:GH15768.pep: gold
Preliminary Size:1649
Sequenced Size:1733

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG7742 2001-09-19 Blastp of sequenced clone
CG7742 2003-01-01 Sim4 clustering to Release 3
CG7742 2008-04-29 Release 5.5 accounting
CG7742 2008-08-15 Release 5.9 accounting
CG7742 2008-12-18 5.12 accounting

Clone Sequence Records

GH15768.complete Sequence

1733 bp (1733 high quality bases) assembled on 2001-09-19

GenBank Submission: AY058392

> GH15768.complete
CTAATCGGTATCAAAACGGTGTAAATAGTTAGTTGGTAGTCAGTGGCAGA
GTAATACGTAGAAAGAACGGTCGGGTCAAGGAGCTATCGGCATGGAGGAG
CTGCAGGATGCCAGCATCCACCATATGACCGCAAAGGTAATCGCGGCCAT
CAAGAACACTAAGAGCTACGAGCCCATCTACAAGGAGCTGCAGAAGCTGG
TCTGCAATCCCAGCGTAGATACTCACGATATGCGCAACACCCTCGAGGAT
GCCATCAAGAGCGCCGGACTGGAGACGGAGATCCGGAATATTGTCTACAA
CCTGGTCCGCACGCGGCTGTCGAAAACAGATGACAAAAACCTGGCCAACA
AACAGGGAGCGAAACCCACCGTTAGTGATCCACTTGGATATTTAAAAAGA
GCTGGTGTGCTTTGGGATCGAAGGGTTAGGAAGAGTTTGAATGCCATGTG
TACAGAGCTGAAGGTTCCATTGCATGGACAACCAAGGATCAGTGCTGATC
GCGAGGACTTTATGGCCAAGTGGAACGAACTGAGCAACTACAATATGGAT
CTGGCCAACTATAGGCCTGTTTACGCTCCAAAGGATTTACTGGAGGTGCT
ACTCTCGCTAAAAGGACCCGCCAAAACCACTGAAAATACAGATCAAATCC
CCCAATGGGAGTTCTCCCACATTGCACTACCTGTGAAAAATCTTTTCGAG
CTGCGTGCCCACTACGCGGATCTGCTGCGAAGTGATAGCTATTTGGGAGT
GCCGGATCTTACGGTTCAGTGCCAGAGGATTCTGGAGGCCAGGCATGCGC
CCATGTGCCAGCAGTTTCTGAAGAAGGGCTGCACACCCGCACCTTATAGG
GGAGCTCTCTGGGCTTCGGTGCTGGACAGCAAGCTACATGACTACGATAT
TGAGTACTGGCAAAAGCTGCGCAATGCCGTTTGGACTACGGATCACATCG
TTGACAAACTGGTCTTCAAGGACATTCAGTTGACGGCCTCCAACGACGAC
CAGTACTTTGTGTTCGAGGACGTGCTCTACCAGGTGCTGCTCTGCTTTTC
TCGGGACACCGATATCGGTGGATGTGTGGAATACGAGACGTTTCCGGTGA
AGGGCAAGACCTACGAAGGTCCTCCATCGGGTGTGGTGCCCTTCCACGGC
ATCTGCATGTTTGCCGCCCCCTTTTGTTATCTGTATGACTCGCCGGTGAG
TCTATACTATACATTCCGGGCCTTCTATATCCGGTACTGCCATCGCTTGA
CCACCATAAACACGCATCCTCAAGGGATTGTCAGTCTGTGCCTGCTCTTC
GAGAAGCTGCTGCAGACATACGAACCGCAGTTATGGTCCCATTTCCGAGA
GCTTCAGATACAGCCCCTGCGGGTGGTCTTCAAATGGCTTATGCGAGCGT
TTTCCGGACATTTGCCTCCCGATCAATTGCTGGTCCTCTGGGATCTGATC
CTTGGCTTTGATAGCTTGGAGATCCTTCCTCTATTCGCCATCATCATTCT
TAGCTTTCGAAAGGAGAGCATCATGCAGGTGGCCTCGTTGGATAGCATCG
AAGCGATTCTGGCAGACTTGTCCTCTATCAAGGTGCTGCCCCTAGTGCAA
CTAGCCCTAAGTCGAGACTAAAAGTGTGGTTTTAAGTTACAAAATTAAAG
TATTAAGAGTGTTTGGAAATATAACATGTATGCAACTGGATAAACTATAT
TTAATATAAAGTCGTAAAAAAAAAAAAAAAAAA

GH15768.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:22:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG7742-RA 1770 CG7742-RA 54..1770 1..1717 8585 100 Plus
CG7742.a 1425 CG7742.a 70..1425 362..1717 6780 100 Plus
TpnC25D.b 620 TpnC25D.b 1..70 295..226 350 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 02:48:00
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 5211963..5212432 1365..896 2350 100 Minus
chr2L 23010047 chr2L 5213417..5213777 361..1 1805 100 Minus
chr2L 23010047 chr2L 5211495..5211763 1715..1447 1345 100 Minus
chr2L 23010047 chr2L 5212487..5212740 896..643 1270 100 Minus
chr2L 23010047 chr2L 5212937..5213124 548..361 940 100 Minus
chr2L 23010047 chr2L 5212790..5212884 642..548 475 100 Minus
chr2L 23010047 chr2L 5211815..5211896 1447..1366 410 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:54:38 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 02:47:58
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5212863..5213332 1365..896 2350 100 Minus
2L 23513712 2L 5214317..5214677 361..1 1805 100 Minus
2L 23513712 2L 5212393..5212663 1717..1447 1355 100 Minus
2L 23513712 2L 5213387..5213640 896..643 1270 100 Minus
2L 23513712 2L 5213837..5214024 548..361 940 100 Minus
2L 23513712 2L 5213690..5213784 642..548 475 100 Minus
2L 23513712 2L 5212715..5212796 1447..1366 410 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:45:25
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5212863..5213332 1365..896 2350 100 Minus
2L 23513712 2L 5214317..5214677 361..1 1805 100 Minus
2L 23513712 2L 5212393..5212663 1717..1447 1355 100 Minus
2L 23513712 2L 5213387..5213640 896..643 1270 100 Minus
2L 23513712 2L 5213837..5214024 548..361 940 100 Minus
2L 23513712 2L 5213690..5213784 642..548 475 100 Minus
2L 23513712 2L 5212715..5212796 1447..1366 410 100 Minus
Blast to na_te.dros performed on 2019-03-16 02:47:58 has no hits.

GH15768.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 02:48:57 Download gff for GH15768.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 5213417..5213777 1..361 100   Minus
chr2L 5212790..5212883 549..642 100 <- Minus
chr2L 5212937..5213123 362..548 100 <- Minus
chr2L 5211495..5211762 1448..1715 100 <- Minus
chr2L 5211815..5211896 1366..1447 100 <- Minus
chr2L 5211963..5212432 896..1365 100 <- Minus
chr2L 5212488..5212740 643..895 100 <- Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:07:08 Download gff for GH15768.complete
Subject Subject Range Query Range Percent Splice Strand
CG7742-RA 1..1530 92..1621 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:14:36 Download gff for GH15768.complete
Subject Subject Range Query Range Percent Splice Strand
CG7742-RA 1..1530 92..1621 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:37:57 Download gff for GH15768.complete
Subject Subject Range Query Range Percent Splice Strand
CG7742-RA 1..1530 92..1621 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:21:32 Download gff for GH15768.complete
Subject Subject Range Query Range Percent Splice Strand
CG7742-RA 1..1530 92..1621 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:57:09 Download gff for GH15768.complete
Subject Subject Range Query Range Percent Splice Strand
CG7742-RA 1..1715 1..1715 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:07:07 Download gff for GH15768.complete
Subject Subject Range Query Range Percent Splice Strand
CG7742-RA 54..1768 1..1715 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:14:36 Download gff for GH15768.complete
Subject Subject Range Query Range Percent Splice Strand
CG7742-RA 54..1768 1..1715 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:37:57 Download gff for GH15768.complete
Subject Subject Range Query Range Percent Splice Strand
CG7742-RA 1..1715 1..1715 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:21:32 Download gff for GH15768.complete
Subject Subject Range Query Range Percent Splice Strand
CG7742-RA 54..1768 1..1715 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:48:57 Download gff for GH15768.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5212395..5212662 1448..1715 100 <- Minus
2L 5212715..5212796 1366..1447 100 <- Minus
2L 5212863..5213332 896..1365 100 <- Minus
2L 5213388..5213640 643..895 100 <- Minus
2L 5213690..5213783 549..642 100 <- Minus
2L 5213837..5214023 362..548 100 <- Minus
2L 5214317..5214677 1..361 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:48:57 Download gff for GH15768.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5212395..5212662 1448..1715 100 <- Minus
2L 5212715..5212796 1366..1447 100 <- Minus
2L 5212863..5213332 896..1365 100 <- Minus
2L 5213388..5213640 643..895 100 <- Minus
2L 5213690..5213783 549..642 100 <- Minus
2L 5213837..5214023 362..548 100 <- Minus
2L 5214317..5214677 1..361 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:48:57 Download gff for GH15768.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5212395..5212662 1448..1715 100 <- Minus
2L 5212715..5212796 1366..1447 100 <- Minus
2L 5212863..5213332 896..1365 100 <- Minus
2L 5213388..5213640 643..895 100 <- Minus
2L 5213690..5213783 549..642 100 <- Minus
2L 5213837..5214023 362..548 100 <- Minus
2L 5214317..5214677 1..361 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:14:36 Download gff for GH15768.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 5212395..5212662 1448..1715 100 <- Minus
arm_2L 5212715..5212796 1366..1447 100 <- Minus
arm_2L 5212863..5213332 896..1365 100 <- Minus
arm_2L 5213388..5213640 643..895 100 <- Minus
arm_2L 5213690..5213783 549..642 100 <- Minus
arm_2L 5213837..5214023 362..548 100 <- Minus
arm_2L 5214317..5214677 1..361 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:15:08 Download gff for GH15768.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5212395..5212662 1448..1715 100 <- Minus
2L 5212715..5212796 1366..1447 100 <- Minus
2L 5212863..5213332 896..1365 100 <- Minus
2L 5213388..5213640 643..895 100 <- Minus
2L 5213690..5213783 549..642 100 <- Minus
2L 5213837..5214023 362..548 100 <- Minus
2L 5214317..5214677 1..361 100   Minus

GH15768.pep Sequence

Translation from 91 to 1620

> GH15768.pep
MEELQDASIHHMTAKVIAAIKNTKSYEPIYKELQKLVCNPSVDTHDMRNT
LEDAIKSAGLETEIRNIVYNLVRTRLSKTDDKNLANKQGAKPTVSDPLGY
LKRAGVLWDRRVRKSLNAMCTELKVPLHGQPRISADREDFMAKWNELSNY
NMDLANYRPVYAPKDLLEVLLSLKGPAKTTENTDQIPQWEFSHIALPVKN
LFELRAHYADLLRSDSYLGVPDLTVQCQRILEARHAPMCQQFLKKGCTPA
PYRGALWASVLDSKLHDYDIEYWQKLRNAVWTTDHIVDKLVFKDIQLTAS
NDDQYFVFEDVLYQVLLCFSRDTDIGGCVEYETFPVKGKTYEGPPSGVVP
FHGICMFAAPFCYLYDSPVSLYYTFRAFYIRYCHRLTTINTHPQGIVSLC
LLFEKLLQTYEPQLWSHFRELQIQPLRVVFKWLMRAFSGHLPPDQLLVLW
DLILGFDSLEILPLFAIIILSFRKESIMQVASLDSIEAILADLSSIKVLP
LVQLALSRD*

GH15768.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 11:56:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15521-PA 509 GF15521-PA 1..509 1..509 2622 95.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 11:56:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24315-PA 509 GG24315-PA 1..509 1..509 2707 98.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 11:56:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH11188-PA 506 GH11188-PA 1..506 1..509 2438 89.2 Plus
Dgri\GH25018-PA 398 GH25018-PA 158..398 269..509 1256 96.3 Plus
Dgri\GH25018-PA 398 GH25018-PA 1..157 1..159 671 79.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:13:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG7742-PC 509 CG7742-PC 1..509 1..509 2682 100 Plus
CG7742-PD 509 CG7742-PD 1..509 1..509 2682 100 Plus
CG7742-PA 509 CG7742-PA 1..509 1..509 2682 100 Plus
CG7742-PB 441 CG7742-PB 1..441 67..509 2232 95.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 11:56:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18064-PA 506 GI18064-PA 1..506 1..509 2407 88 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 11:56:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL18562-PA 508 GL18562-PA 1..508 1..509 2530 91.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 11:57:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20558-PA 508 GA20558-PA 1..508 1..509 2530 91.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 11:57:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18033-PA 509 GM18033-PA 1..509 1..509 2721 99.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 11:57:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22661-PA 509 GD22661-PA 1..509 1..509 2723 99.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 11:57:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16521-PA 506 GJ16521-PA 1..506 1..509 2437 89.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 11:57:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK21071-PA 512 GK21071-PA 1..512 1..509 2539 92.4 Plus
Dwil\GK18772-PA 79 GK18772-PA 1..66 441..506 308 97 Plus
Dwil\GK16010-PA 79 GK16010-PA 1..66 441..506 308 97 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 11:57:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE19009-PA 509 GE19009-PA 1..509 1..509 2711 98.8 Plus

GH15768.hyp Sequence

Translation from 91 to 1620

> GH15768.hyp
MEELQDASIHHMTAKVIAAIKNTKSYEPIYKELQKLVCNPSVDTHDMRNT
LEDAIKSAGLETEIRNIVYNLVRTRLSKTDDKNLANKQGAKPTVSDPLGY
LKRAGVLWDRRVRKSLNAMCTELKVPLHGQPRISADREDFMAKWNELSNY
NMDLANYRPVYAPKDLLEVLLSLKGPAKTTENTDQIPQWEFSHIALPVKN
LFELRAHYADLLRSDSYLGVPDLTVQCQRILEARHAPMCQQFLKKGCTPA
PYRGALWASVLDSKLHDYDIEYWQKLRNAVWTTDHIVDKLVFKDIQLTAS
NDDQYFVFEDVLYQVLLCFSRDTDIGGCVEYETFPVKGKTYEGPPSGVVP
FHGICMFAAPFCYLYDSPVSLYYTFRAFYIRYCHRLTTINTHPQGIVSLC
LLFEKLLQTYEPQLWSHFRELQIQPLRVVFKWLMRAFSGHLPPDQLLVLW
DLILGFDSLEILPLFAIIILSFRKESIMQVASLDSIEAILADLSSIKVLP
LVQLALSRD*

GH15768.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 08:03:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG7742-PC 509 CG7742-PC 1..509 1..509 2682 100 Plus
CG7742-PD 509 CG7742-PD 1..509 1..509 2682 100 Plus
CG7742-PA 509 CG7742-PA 1..509 1..509 2682 100 Plus
CG7742-PB 441 CG7742-PB 1..441 67..509 2232 95.9 Plus