Clone GH15825 Report

Search the DGRC for GH15825

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:158
Well:25
Vector:pOT2
Associated Gene/TranscriptCG3085-RA
Protein status:GH15825.pep: gold
Preliminary Size:1484
Sequenced Size:1579

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG3085 2001-01-01 Release 2 assignment
CG3085 2001-09-19 Blastp of sequenced clone
CG3085 2003-01-01 Sim4 clustering to Release 3
CG3085 2008-04-29 Release 5.5 accounting
CG3085 2008-08-15 Release 5.9 accounting
CG3085 2008-12-18 5.12 accounting

Clone Sequence Records

GH15825.complete Sequence

1579 bp (1579 high quality bases) assembled on 2001-09-19

GenBank Submission: AY058393

> GH15825.complete
GTTCTAGTTGGGAGCACACACTTTCTGAAATTGTTAACGCATAAATCCTG
CTGTTTTACCTAAACTTTTGCAAACATAATGGCCTTCCGCTCGGTGGTTA
CGATGGAGAAGCCGCTCCAGCACATTTCGCTGACGGACTGGTATGCCCGT
GTGAACCAGATGCGGAATGTGGCGGATGCCCGGAGGTCGGACGCCTTCGC
CATCCGCCACTCATCCCGATCCTTGAGGAACGAGACGCGGATCGAGGGCG
ACTGGGCCAACTACGAGACAAATGAGGCTCTGACCGATCGCATCTCCGAG
TTGAATCGCTGGCGGGATATCATTTCCAAGTCCTTCGAGAAGATCGAGCG
CGAGATATTCATGCTGCAGGAGGAGAAGAATGCCACGGAACGGGAGCTGG
AGGCGTTGGCAGGTCCGATTTCCGTGATAGCCGAGTGCCTGACCATAAGG
GACGGTCGCCTCGGATCGGAGATCACCTACGATGAGGCCGACACCGAGAT
CAAGAACGAACTGGTCGTGCTGGAGAACAACCAGCGCCTGCTGGCCGATC
GATGCCAGAAGGCGTGGGAGAAGCTCAATCGTCTGGAGGAAGTGCGCTTC
AAGATCGGCCTGGAGATCGAGTTCAAGGTGGAGGCGGTGCAGCTGGACAA
CTCACAGCTGGCGCTCGATCGCAACTCGGCCAATATCTCATACAAGCCGG
ATCCCACGAGAAATCCCAAGAACTCCTGTTCCTACGAGTCCTGGCTGGAG
AACGTGAAGAACATAAAGCTGCTGGCGGAGAATGAGCTGGCCGACACGTA
CGCCATTCGGGAGGCTTTGTTCGTGTGCCGCGAAAAGGCGCGCAACATGC
TGCAGTCGCAGCAGGAGCGGGCGGAGCACACCATCCGCAAACGGATCTTC
GAGACGCAGCGGGCCAGAAACGAACTGGAGTGGCAGCAGCTCAAGATGAA
GGAGGAGATGGAGAAGGCCATGTGCGAGATCCGCACCTCGGAGAATGCGC
TGCGTGACAAGACGGATGCACTGAAGCTGGCCGAGACACGCCTGGAGAAT
CGTGCCCAGAGGTCGGGCATGGAACTGTGCATGGACCAGGCGCACGACAT
GCTCTGCTTGGAGGTGGAGAAGCTGCGAGAGATACGACGCCGACTGCAGG
TCAAGATCGACGAGAGCAAGACCAACTTTAGTCTGCTGGAGGAGCACGGC
AAGCGAATCGACGTGGATCTGGAGAACAAGCAGCACTCGCTGATGACGGA
CATCAGGGCCCTGGACTTGCGCATGCGTCTCCGGGGCGGCGAGTTCGGCT
CCAAGGTGGCCAACGCCTCGCAGACGGACAGGAACATAACGCTCACTCGC
ATGGAGAACGAGATTCCCAAAGACTAGACTTGGGACTATGCCGCTTGCTC
ACTTATTCAATTCTATTTGCCCTGACGTTCGTTGCACGTTGTAATTTGTC
CAAATTATTGTGAATAAATAAATGGTATAACGTTAAAGCTTCTTCTGGCC
AAAGCTGAAGGTCAGTTCACCCAGCAGGGGCTTGAAAACCGTGCTCCATT
CTAGATGCGTAAAAAAAAAAAAAAAAAAA

GH15825.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:22:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG3085.b 1734 CG3085.b 174..1734 1..1561 7805 100 Plus
CG3085-RA 1746 CG3085-RA 186..1746 1..1561 7805 100 Plus
CG3085.a 1734 CG3085.a 174..1734 1..1561 7805 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 12:51:04
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 18962474..18963311 723..1560 4145 99.6 Plus
chr2R 21145070 chr2R 18961984..18962416 290..722 2135 99.5 Plus
chr2R 21145070 chr2R 18961631..18961920 1..290 1450 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:54:42 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 12:51:03
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 23076020..23076859 723..1562 4200 100 Plus
2R 25286936 2R 23075530..23075962 290..722 2165 100 Plus
2R 25286936 2R 23075177..23075466 1..290 1450 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:45:18
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 23077219..23078058 723..1562 4200 100 Plus
2R 25260384 2R 23076729..23077161 290..722 2165 100 Plus
2R 25260384 2R 23076376..23076665 1..290 1450 100 Plus
Blast to na_te.dros performed on 2019-03-16 12:51:03 has no hits.

GH15825.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 12:51:42 Download gff for GH15825.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 18961631..18961920 1..290 100 -> Plus
chr2R 18961985..18962416 291..722 99 -> Plus
chr2R 18962474..18963311 723..1560 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:45:06 Download gff for GH15825.complete
Subject Subject Range Query Range Percent Splice Strand
CG3085-RA 1..1299 79..1377 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:06:56 Download gff for GH15825.complete
Subject Subject Range Query Range Percent Splice Strand
CG3085-RA 1..1299 79..1377 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:11:15 Download gff for GH15825.complete
Subject Subject Range Query Range Percent Splice Strand
CG3085-RA 1..1299 79..1377 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:37:41 Download gff for GH15825.complete
Subject Subject Range Query Range Percent Splice Strand
CG3085-RA 1..1299 79..1377 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:09:50 Download gff for GH15825.complete
Subject Subject Range Query Range Percent Splice Strand
CG3085-RA 1..1299 79..1377 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:56:51 Download gff for GH15825.complete
Subject Subject Range Query Range Percent Splice Strand
CG3085-RA 109..1668 1..1560 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:06:56 Download gff for GH15825.complete
Subject Subject Range Query Range Percent Splice Strand
CG3085-RA 109..1668 1..1560 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:11:15 Download gff for GH15825.complete
Subject Subject Range Query Range Percent Splice Strand
CG3085-RA 111..1670 1..1560 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:37:41 Download gff for GH15825.complete
Subject Subject Range Query Range Percent Splice Strand
CG3085-RA 109..1668 1..1560 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:09:50 Download gff for GH15825.complete
Subject Subject Range Query Range Percent Splice Strand
CG3085-RA 111..1670 1..1560 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:51:42 Download gff for GH15825.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23075177..23075466 1..290 100 -> Plus
2R 23075531..23075962 291..722 100 -> Plus
2R 23076020..23076857 723..1560 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:51:42 Download gff for GH15825.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23075177..23075466 1..290 100 -> Plus
2R 23075531..23075962 291..722 100 -> Plus
2R 23076020..23076857 723..1560 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:51:42 Download gff for GH15825.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23075177..23075466 1..290 100 -> Plus
2R 23075531..23075962 291..722 100 -> Plus
2R 23076020..23076857 723..1560 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:11:15 Download gff for GH15825.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18962700..18962989 1..290 100 -> Plus
arm_2R 18963054..18963485 291..722 100 -> Plus
arm_2R 18963543..18964380 723..1560 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:14:55 Download gff for GH15825.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23076394..23076683 1..290 100 -> Plus
2R 23076748..23077179 291..722 100 -> Plus
2R 23077237..23078074 723..1560 100   Plus

GH15825.pep Sequence

Translation from 78 to 1376

> GH15825.pep
MAFRSVVTMEKPLQHISLTDWYARVNQMRNVADARRSDAFAIRHSSRSLR
NETRIEGDWANYETNEALTDRISELNRWRDIISKSFEKIEREIFMLQEEK
NATERELEALAGPISVIAECLTIRDGRLGSEITYDEADTEIKNELVVLEN
NQRLLADRCQKAWEKLNRLEEVRFKIGLEIEFKVEAVQLDNSQLALDRNS
ANISYKPDPTRNPKNSCSYESWLENVKNIKLLAENELADTYAIREALFVC
REKARNMLQSQQERAEHTIRKRIFETQRARNELEWQQLKMKEEMEKAMCE
IRTSENALRDKTDALKLAETRLENRAQRSGMELCMDQAHDMLCLEVEKLR
EIRRRLQVKIDESKTNFSLLEEHGKRIDVDLENKQHSLMTDIRALDLRMR
LRGGEFGSKVANASQTDRNITLTRMENEIPKD*

GH15825.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 11:57:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13562-PA 433 GF13562-PA 1..433 1..432 2058 90.3 Plus
Dana\GF20933-PA 604 GF20933-PA 223..585 22..391 205 23.5 Plus
Dana\GF10443-PA 421 GF10443-PA 129..384 114..370 182 24.2 Plus
Dana\GF14924-PA 583 GF14924-PA 233..540 63..381 173 22 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 11:57:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22824-PA 432 GG22824-PA 1..432 1..432 2253 99.1 Plus
Dere\GG17527-PA 601 GG17527-PA 220..582 22..391 213 24.4 Plus
Dere\GG14110-PA 421 GG14110-PA 129..384 114..370 182 24.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 11:57:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH22718-PA 433 GH22718-PA 1..432 1..431 1782 77.8 Plus
Dgri\GH22717-PA 431 GH22717-PA 1..430 1..431 1357 63.9 Plus
Dgri\GH24869-PA 595 GH24869-PA 214..576 22..391 218 24.1 Plus
Dgri\GH10383-PA 585 GH10383-PA 234..521 63..350 206 27.6 Plus
Dgri\GH22217-PA 421 GH22217-PA 129..384 114..370 180 24.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:06:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG3085-PB 432 CG3085-PB 1..432 1..432 2192 100 Plus
CG3085-PA 432 CG3085-PA 1..432 1..432 2192 100 Plus
CG32820-PB 520 CG32820-PB 139..501 22..391 282 23.9 Plus
CG17450-PC 520 CG17450-PC 139..501 22..391 282 23.9 Plus
CG17450-PA 520 CG17450-PA 139..501 22..391 282 23.9 Plus
CG32819-PB 520 CG32819-PB 139..501 22..391 282 23.9 Plus
CG32820-PA 601 CG32820-PA 220..582 22..391 282 23.9 Plus
CG17450-PB 601 CG17450-PB 220..582 22..391 282 23.9 Plus
CG32819-PA 601 CG32819-PA 220..582 22..391 282 23.9 Plus
Tektin-C-PD 421 CG10541-PD 34..417 20..402 251 21.8 Plus
Tektin-C-PC 421 CG10541-PC 34..417 20..402 251 21.8 Plus
Tektin-C-PA 421 CG10541-PA 34..417 20..402 251 21.8 Plus
Tektin-A-PB 585 CG4767-PB 188..562 17..391 235 21.6 Plus
Tektin-A-PA 585 CG4767-PA 188..562 17..391 235 21.6 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 11:57:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18504-PA 433 GI18504-PA 1..431 1..430 1647 73.5 Plus
Dmoj\GI18503-PA 433 GI18503-PA 1..432 1..431 1262 57.9 Plus
Dmoj\GI18502-PA 425 GI18502-PA 1..420 9..427 1050 50.7 Plus
Dmoj\GI14700-PA 596 GI14700-PA 177..577 1..391 228 24.2 Plus
Dmoj\GI17364-PA 586 GI17364-PA 235..522 63..350 202 26.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 11:57:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL10775-PA 433 GL10775-PA 1..432 1..431 2013 86.8 Plus
Dper\GL21420-PA 421 GL21420-PA 129..384 114..370 184 24.2 Plus
Dper\GL15298-PA 586 GL15298-PA 235..563 63..391 180 24.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 11:57:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA15915-PA 433 GA15915-PA 1..432 1..431 2013 86.8 Plus
Dpse\GA22889-PA 488 GA22889-PA 146..469 68..391 212 25.4 Plus
Dpse\GA10385-PA 421 GA10385-PA 129..384 114..370 184 24.2 Plus
Dpse\GA18416-PA 586 GA18416-PA 235..563 63..391 180 24.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 11:57:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15983-PA 432 GM15983-PA 1..432 1..432 2245 98.8 Plus
Dsec\GM13895-PA 421 GM13895-PA 129..384 114..370 182 24.2 Plus
Dsec\GM13535-PA 589 GM13535-PA 222..570 22..391 177 23.4 Plus
Dsec\GM18638-PA 585 GM18638-PA 188..552 17..392 151 24.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 11:57:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11736-PA 432 GD11736-PA 1..432 1..432 2243 98.6 Plus
Dsim\GD15491-PA 605 GD15491-PA 224..586 22..391 216 24.7 Plus
Dsim\GD17596-PA 421 GD17596-PA 129..384 114..370 174 24.7 Plus
Dsim\GD24023-PA 385 GD24023-PA 29..313 58..342 151 25.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 11:57:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21366-PA 433 GJ21366-PA 1..432 1..431 1836 79.9 Plus
Dvir\GJ21365-PA 433 GJ21365-PA 1..432 1..431 1406 63.7 Plus
Dvir\GJ21364-PA 425 GJ21364-PA 1..424 9..431 1147 53.8 Plus
Dvir\GJ10756-PA 431 GJ10756-PA 1..426 1..427 1057 51.2 Plus
Dvir\GJ17002-PA 596 GJ17002-PA 215..577 22..391 227 24.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 11:57:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK19550-PA 433 GK19550-PA 1..433 1..432 1942 84.3 Plus
Dwil\GK25605-PA 607 GK25605-PA 188..588 1..391 219 24 Plus
Dwil\GK24269-PA 582 GK24269-PA 231..518 63..350 205 25.3 Plus
Dwil\GK17535-PA 421 GK17535-PA 129..384 114..370 184 24.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 11:57:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE14259-PA 432 GE14259-PA 1..432 1..432 2251 99.1 Plus
Dyak\GE15287-PA 601 GE15287-PA 220..582 22..391 216 24.6 Plus
Dyak\GE20534-PA 421 GE20534-PA 129..384 114..370 182 24.2 Plus

GH15825.hyp Sequence

Translation from 78 to 1376

> GH15825.hyp
MAFRSVVTMEKPLQHISLTDWYARVNQMRNVADARRSDAFAIRHSSRSLR
NETRIEGDWANYETNEALTDRISELNRWRDIISKSFEKIEREIFMLQEEK
NATERELEALAGPISVIAECLTIRDGRLGSEITYDEADTEIKNELVVLEN
NQRLLADRCQKAWEKLNRLEEVRFKIGLEIEFKVEAVQLDNSQLALDRNS
ANISYKPDPTRNPKNSCSYESWLENVKNIKLLAENELADTYAIREALFVC
REKARNMLQSQQERAEHTIRKRIFETQRARNELEWQQLKMKEEMEKAMCE
IRTSENALRDKTDALKLAETRLENRAQRSGMELCMDQAHDMLCLEVEKLR
EIRRRLQVKIDESKTNFSLLEEHGKRIDVDLENKQHSLMTDIRALDLRMR
LRGGEFGSKVANASQTDRNITLTRMENEIPKD*

GH15825.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 08:03:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG3085-PB 432 CG3085-PB 1..432 1..432 2192 100 Plus
CG3085-PA 432 CG3085-PA 1..432 1..432 2192 100 Plus
CG32820-PB 520 CG32820-PB 139..501 22..391 282 23.9 Plus
CG32819-PB 520 CG32819-PB 139..501 22..391 282 23.9 Plus
CG17450-PC 520 CG17450-PC 139..501 22..391 282 23.9 Plus