BDGP Sequence Production Resources |
Search the DGRC for GH16063
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 160 |
Well: | 63 |
Vector: | pOT2 |
Associated Gene/Transcript | Faa-RA |
Protein status: | GH16063.pep: gold |
Preliminary Size: | 1483 |
Sequenced Size: | 1433 |
Gene | Date | Evidence |
---|---|---|
CG14993 | 2001-01-01 | Release 2 assignment |
CG14993 | 2003-01-01 | Sim4 clustering to Release 3 |
CG14993 | 2003-02-17 | Blastp of sequenced clone |
Faa | 2008-04-29 | Release 5.5 accounting |
Faa | 2008-08-15 | Release 5.9 accounting |
Faa | 2008-12-18 | 5.12 accounting |
1433 bp (1433 high quality bases) assembled on 2003-02-17
GenBank Submission: AY069144
> GH16063.complete CAGCTCTGGCTCCGCGCACGCTTTTTCCGCTTCTCTGCTTCACTTTATTG ATTCGCACCAACCTGCCCAAGTTTTCCACTTTGAGTGCTTTTAAAATGTC CCAGAGTTTTGTGCCAGTGCCAGAGAACAGCGATTTTCCGCTGGAAAATC TACCCTACGCTGTCTTCTCAACCGAAAACAATAAAGTTCACCGTATTTGT GTGGCCATTGGAGAGCATGTCCTGGACCTGAAAGCTGTCTCGCAGTTGTT TCCTTTCCAAGTTCAGAAAAGCCTGCAGGCCGAAACTTTGAATGAGCTTA TGGGATTGGACTTTGAAGCTTGGGATGTGGTAAGAAGCCAGACTCAAAAG CTATTGACGAAGGGTTCAGAATTGGACCACAATGTGGACTTGAAGGCGGT TTCCATTGTGCCACAGTCTGAGATCAAGCTGCACCTGCCTGCACAGATTG GTGACTATACAGACTTTTACTCATCCATCCACCATGCCACCAATGTCGGC ATTATGTTCCGTGGACCAGACAATGCTCTGATGCCCAACTGGCGCCATCT GCCGGTGGGCTATCATGGTCGTGCAAGTTCTGTGGTGGTTTCCGGTACTC CCATCCGTCGTCCTCTTGGTCAAACGTTTCCCGATGGAGCAGAGAAGCCC GTCTTTGGCGCCTGCAAGCTTCTGGATTTCGAACTAGAAATGGCTTTCTT TATCGGTGGTAAGGGAAATCAGCTGGGTGAACCCATACGCGTGGATGAGG CCTGGAAGAACGTGTTCGGTTTCACGCTGATGAACGACTGGAGTGCCAGG GATATTCAGAAGTGGGAATATGTGCCACTGGGCCCCTTCACCGCAAAGAA TCTGGGAACCACCATCTCCCCTTGGGTAGTGCCCACAGCTGCCCTGAAGC CCTTCGTCTTGGACAACTTTCCTCAGGAACCGGAGGTGCTTCCCTATCTG CGCCAGAACATTCCCTTTAACTTTGATATCAACCTCGAGGTGTCTTTGAA ACCCGCCGATCAAAACGAAGCGCTTATTTCAAAGTCGAACTTCAAACACC TTTATTGGACTCCACTGCAGCAAATCGCTCATCACACAGTCACCGGTTGT AATCTGCGTCCTGGTGATCTGATGGCCTCCGGAACGATCTCCGGTGAGAC TCCAGACTCGTACGGATCACTTTTAGAGCTCTGCTGGAAGGGCACCAAAA CATTGGAGCTTCCGGGTGGTAAGACCAGAAAATTCCTCCAGGACTTTGAC GAGGTCATCATCCGTGGCCACTGCGAAAAGAACGGACTGCGAATCGGATT CGGGGAGTGTGTGGGTCAGGTGCTGCCTGCCCACCCCGTTCCGCAGTAGG ACCACTTATTAACATAAGTAAATGAAATAAATTCTATTCAGTCTTCCTGG ATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Faa-RA | 1470 | Faa-RA | 24..1423 | 4..1403 | 7000 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 4071876..4072477 | 1002..401 | 3010 | 100 | Minus |
chr3L | 24539361 | chr3L | 4071418..4071817 | 1402..1003 | 2000 | 100 | Minus |
chr3L | 24539361 | chr3L | 4072538..4072755 | 400..183 | 1090 | 100 | Minus |
chr3L | 24539361 | chr3L | 4073140..4073318 | 182..4 | 895 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 4072490..4073091 | 1002..401 | 3010 | 100 | Minus |
3L | 28110227 | 3L | 4072031..4072431 | 1403..1003 | 2005 | 100 | Minus |
3L | 28110227 | 3L | 4073152..4073369 | 400..183 | 1090 | 100 | Minus |
3L | 28110227 | 3L | 4073754..4073932 | 182..4 | 895 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 4072490..4073091 | 1002..401 | 3010 | 100 | Minus |
3L | 28103327 | 3L | 4072031..4072431 | 1403..1003 | 2005 | 100 | Minus |
3L | 28103327 | 3L | 4073152..4073369 | 400..183 | 1090 | 100 | Minus |
3L | 28103327 | 3L | 4073754..4073932 | 182..4 | 895 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 4071418..4071817 | 1003..1402 | 100 | <- | Minus |
chr3L | 4071876..4072477 | 401..1002 | 100 | <- | Minus |
chr3L | 4072538..4072755 | 183..400 | 100 | <- | Minus |
chr3L | 4073140..4073320 | 1..182 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Faa-RA | 1..1254 | 96..1349 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Faa-RA | 1..1254 | 96..1349 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Faa-RA | 1..1254 | 96..1349 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Faa-RA | 1..1254 | 96..1349 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Faa-RA | 1..1254 | 96..1349 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Faa-RA | 16..1416 | 1..1402 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Faa-RA | 16..1416 | 1..1402 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Faa-RA | 21..1421 | 1..1402 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Faa-RA | 16..1416 | 1..1402 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Faa-RA | 21..1421 | 1..1402 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 4072032..4072431 | 1003..1402 | 100 | <- | Minus |
3L | 4072490..4073091 | 401..1002 | 100 | <- | Minus |
3L | 4073152..4073369 | 183..400 | 100 | <- | Minus |
3L | 4073754..4073934 | 1..182 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 4072032..4072431 | 1003..1402 | 100 | <- | Minus |
3L | 4072490..4073091 | 401..1002 | 100 | <- | Minus |
3L | 4073152..4073369 | 183..400 | 100 | <- | Minus |
3L | 4073754..4073934 | 1..182 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 4072032..4072431 | 1003..1402 | 100 | <- | Minus |
3L | 4072490..4073091 | 401..1002 | 100 | <- | Minus |
3L | 4073152..4073369 | 183..400 | 100 | <- | Minus |
3L | 4073754..4073934 | 1..182 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 4073152..4073369 | 183..400 | 100 | <- | Minus |
arm_3L | 4073754..4073934 | 1..182 | 99 | Minus | |
arm_3L | 4072032..4072431 | 1003..1402 | 100 | <- | Minus |
arm_3L | 4072490..4073091 | 401..1002 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 4072032..4072431 | 1003..1402 | 100 | <- | Minus |
3L | 4072490..4073091 | 401..1002 | 100 | <- | Minus |
3L | 4073152..4073369 | 183..400 | 100 | <- | Minus |
3L | 4073754..4073934 | 1..182 | 99 | Minus |
Translation from 0 to 1348
> GH16063.hyp TLAPRTLFPLLCFTLLIRTNLPKFSTLSAFKMSQSFVPVPENSDFPLENL PYAVFSTENNKVHRICVAIGEHVLDLKAVSQLFPFQVQKSLQAETLNELM GLDFEAWDVVRSQTQKLLTKGSELDHNVDLKAVSIVPQSEIKLHLPAQIG DYTDFYSSIHHATNVGIMFRGPDNALMPNWRHLPVGYHGRASSVVVSGTP IRRPLGQTFPDGAEKPVFGACKLLDFELEMAFFIGGKGNQLGEPIRVDEA WKNVFGFTLMNDWSARDIQKWEYVPLGPFTAKNLGTTISPWVVPTAALKP FVLDNFPQEPEVLPYLRQNIPFNFDINLEVSLKPADQNEALISKSNFKHL YWTPLQQIAHHTVTGCNLRPGDLMASGTISGETPDSYGSLLELCWKGTKT LELPGGKTRKFLQDFDEVIIRGHCEKNGLRIGFGECVGQVLPAHPVPQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Faa-PA | 417 | CG14993-PA | 1..417 | 32..448 | 2231 | 100 | Plus |
Translation from 95 to 1348
> GH16063.pep MSQSFVPVPENSDFPLENLPYAVFSTENNKVHRICVAIGEHVLDLKAVSQ LFPFQVQKSLQAETLNELMGLDFEAWDVVRSQTQKLLTKGSELDHNVDLK AVSIVPQSEIKLHLPAQIGDYTDFYSSIHHATNVGIMFRGPDNALMPNWR HLPVGYHGRASSVVVSGTPIRRPLGQTFPDGAEKPVFGACKLLDFELEMA FFIGGKGNQLGEPIRVDEAWKNVFGFTLMNDWSARDIQKWEYVPLGPFTA KNLGTTISPWVVPTAALKPFVLDNFPQEPEVLPYLRQNIPFNFDINLEVS LKPADQNEALISKSNFKHLYWTPLQQIAHHTVTGCNLRPGDLMASGTISG ETPDSYGSLLELCWKGTKTLELPGGKTRKFLQDFDEVIIRGHCEKNGLRI GFGECVGQVLPAHPVPQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24408-PA | 417 | GF24408-PA | 1..417 | 1..417 | 2122 | 93.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14224-PA | 417 | GG14224-PA | 1..417 | 1..417 | 2185 | 97.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17004-PA | 417 | GH17004-PA | 1..417 | 1..417 | 1943 | 84.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Faa-PA | 417 | CG14993-PA | 1..417 | 1..417 | 2231 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11418-PA | 417 | GI11418-PA | 1..417 | 1..417 | 1948 | 85.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16789-PA | 417 | GL16789-PA | 1..417 | 1..417 | 2062 | 90.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13410-PA | 417 | GA13410-PA | 1..417 | 1..417 | 2061 | 90.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14018-PA | 417 | GM14018-PA | 1..417 | 1..417 | 2190 | 97.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13297-PA | 417 | GD13297-PA | 1..417 | 1..417 | 2211 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13614-PA | 417 | GJ13614-PA | 1..417 | 1..417 | 1937 | 85.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13735-PA | 417 | GK13735-PA | 1..417 | 1..417 | 1968 | 86.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20652-PA | 417 | GE20652-PA | 1..417 | 1..417 | 2168 | 96.6 | Plus |