Clone GH16156 Report

Search the DGRC for GH16156

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:161
Well:56
Vector:pOT2
Associated Gene/TranscriptCG14891-RA
Protein status:GH16156.pep: gold
Preliminary Size:1626
Sequenced Size:1679

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG14891 2001-09-19 Blastp of sequenced clone
CG14891 2003-01-01 Sim4 clustering to Release 3
CG14891 2008-04-29 Release 5.5 accounting
CG14891 2008-08-15 Release 5.9 accounting
CG14891 2008-12-18 5.12 accounting

Clone Sequence Records

GH16156.complete Sequence

1679 bp (1679 high quality bases) assembled on 2001-09-19

GenBank Submission: AY058395

> GH16156.complete
CCCAAATCAAAAGCAATGTTCCGCATGAGGCCAGATATTAAAAATTTTTA
CATTGAGCGTGGTGTGGCGTACACCGAAGATCGCGAGGTTGTGCGACAGC
TGACGATCTCCGGGAGTAGGCGGTTTTTGAAGTACCAGCTCCTGAAGTAC
TTCTCGATTTTCGGAAAAGTAGAGAAACTCCATTGGAAAAAGAAAAAAAG
ATCGGGATCGGTTCTTTTTTATGAGGCTACCCATGCGGCAAAGGCTTTGT
ATTGTACTAAGCACACTATCGATGGACATGATCTTTATTTACAGGCCAGC
ACCTCCTGGCACCCAACGCCGGTGGAGGAATCAGGAACTCTTTCTGCCTA
CGATCTACCCATTACCGATGACATTTGGTGGAAAGTGCTCGATTATCTAT
CACTAAATGAACGTCTCAACTTTGCCGCCAGTTGTGAAAGATTCCAGGCG
ATCTACGAATTGGATTCGCATCGGATCAATCATGTTCTTAATATGAAGGA
CGTTTGCACACTGACCCACCGGGTCATTAAAAGATTGATGCTGCTATCAG
GAAAACACATTCATTGTGTAACAGGTGGCCCGCTTCATCCGAATTGGCCG
TATTTGACCGAGTTTGTGCAGCTGTTGGGTGTAAGCTGTCCCAATCTAAC
AGAGCTAAGCTTCTTCAAAATTTCTGTCAGCCTAGCCCACATGACTCACC
TGTTCGATGGTGCCAATGGGTTGATTAATATTACCAACATATCCTTGAGG
CGTTGTAACCTGAAAGATGCTCACATTTACTGCTTGCAGATGCTATCGAA
ACTAAAGAGTCTGGACATCAGAGAAAACTTTAGTATTAAAGGCGACAGTT
TAAAATCTCTGCCAATTTCCTTGGAGATTTTAAATGTTTCAGGATGCGTA
GATCTGTCGCCCAAGTGTCTAATCCAACTTGCGGCCCTGTCGCATCTCCG
CGAACTGCGCTGCCCTGGCATTGTCAAGTTTGCGAAAGATAATGAGCTGT
ACGGACGGCTCGCACATTACTGCCCCATGCTCGAGGTTCTCGAGCTTACC
GACTTCATGAATGTGATACAGCTGGGCGGTCTGTCTCGTCTCCACACCTT
GGTTATTCACTCTTCCGCCCAGCTTGACTACCATGTGAATAACGTGCTGC
TTACGTCGATCGCGGAATCGTATTCGCTGCGCCATCTAGAGATTCTGGAT
TCTTTTGGACCTATGTCGGATACTTCCTTCGATCTGAGTATTTTCTCCCA
GCTTAAAGAACTGCGGACCCTGATATTACATAATCAGAACTTTACAACGC
TACACCTAATGGGATTGCAAAAACTGTCTACCTTGGAGTTTCTGGACCTG
AGTGGCTCGCCCAATCTGTCCAATGAGGTCGTTGCGAAGTTGACCAAATC
GCTTAGCGGACTGCGCCGGTTGAAGGTTGATTTCTGTCCTCTTATCACAC
GACAATTAACCAAGATCCTAGAAGGGAATCCTAAGCTTCAAGTAGACTTT
TAGGTTCAGCTGCGGCTCAACAACAATGTTTTTATATCTATCCTGCTTTC
TTTGTAAAATGTAAATTTGTATTGGCCTAACTTTATATTGGACCCGTTGA
GCTTATGTAATAAAGTGCTCCGGTCATGTTTTTGACAGAATACAAAGCAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAA

GH16156.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:22:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG14891-RA 1648 CG14891-RA 1..1648 1..1648 8240 100 Plus
CG14891.a 1649 CG14891.a 2..1649 1..1648 8240 100 Plus
CG14891-RB 1310 CG14891-RB 1..1310 339..1648 6550 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 17:35:03
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 12396055..12397702 1..1648 8195 99.8 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:55:06 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 17:35:01
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 16571516..16573168 1..1653 8265 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:45:21
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 16312347..16313999 1..1653 8265 100 Plus
Blast to na_te.dros performed on 2019-03-15 17:35:01 has no hits.

GH16156.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 17:35:41 Download gff for GH16156.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 12396055..12397702 1..1648 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:45:28 Download gff for GH16156.complete
Subject Subject Range Query Range Percent Splice Strand
CG14891-RA 1..1488 16..1503 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:06:59 Download gff for GH16156.complete
Subject Subject Range Query Range Percent Splice Strand
CG14891-RA 1..1488 16..1503 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:40:30 Download gff for GH16156.complete
Subject Subject Range Query Range Percent Splice Strand
CG14891-RA 1..1488 16..1503 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:37:45 Download gff for GH16156.complete
Subject Subject Range Query Range Percent Splice Strand
CG14891-RA 1..1488 16..1503 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:41:37 Download gff for GH16156.complete
Subject Subject Range Query Range Percent Splice Strand
CG14891-RA 1..1488 16..1503 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:56:56 Download gff for GH16156.complete
Subject Subject Range Query Range Percent Splice Strand
CG14891-RA 1..1648 1..1648 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:06:59 Download gff for GH16156.complete
Subject Subject Range Query Range Percent Splice Strand
CG14891-RA 1..1643 1..1643 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:40:30 Download gff for GH16156.complete
Subject Subject Range Query Range Percent Splice Strand
CG14891-RA 2..1644 1..1643 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:37:45 Download gff for GH16156.complete
Subject Subject Range Query Range Percent Splice Strand
CG14891-RA 1..1648 1..1648 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:41:37 Download gff for GH16156.complete
Subject Subject Range Query Range Percent Splice Strand
CG14891-RA 2..1644 1..1643 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:35:41 Download gff for GH16156.complete
Subject Subject Range Query Range Percent Splice Strand
3R 16571516..16573163 1..1648 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:35:41 Download gff for GH16156.complete
Subject Subject Range Query Range Percent Splice Strand
3R 16571516..16573163 1..1648 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:35:41 Download gff for GH16156.complete
Subject Subject Range Query Range Percent Splice Strand
3R 16571516..16573163 1..1648 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:40:30 Download gff for GH16156.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 12397238..12398885 1..1648 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:15:00 Download gff for GH16156.complete
Subject Subject Range Query Range Percent Splice Strand
3R 16312347..16313994 1..1648 100   Plus

GH16156.hyp Sequence

Translation from 0 to 1502

> GH16156.hyp
PKSKAMFRMRPDIKNFYIERGVAYTEDREVVRQLTISGSRRFLKYQLLKY
FSIFGKVEKLHWKKKKRSGSVLFYEATHAAKALYCTKHTIDGHDLYLQAS
TSWHPTPVEESGTLSAYDLPITDDIWWKVLDYLSLNERLNFAASCERFQA
IYELDSHRINHVLNMKDVCTLTHRVIKRLMLLSGKHIHCVTGGPLHPNWP
YLTEFVQLLGVSCPNLTELSFFKISVSLAHMTHLFDGANGLINITNISLR
RCNLKDAHIYCLQMLSKLKSLDIRENFSIKGDSLKSLPISLEILNVSGCV
DLSPKCLIQLAALSHLRELRCPGIVKFAKDNELYGRLAHYCPMLEVLELT
DFMNVIQLGGLSRLHTLVIHSSAQLDYHVNNVLLTSIAESYSLRHLEILD
SFGPMSDTSFDLSIFSQLKELRTLILHNQNFTTLHLMGLQKLSTLEFLDL
SGSPNLSNEVVAKLTKSLSGLRRLKVDFCPLITRQLTKILEGNPKLQVDF
*

GH16156.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 08:05:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG14891-PA 495 CG14891-PA 1..495 6..500 2572 100 Plus
CG15056-PA 399 CG15056-PA 13..378 123..486 435 33.2 Plus

GH16156.pep Sequence

Translation from 15 to 1502

> GH16156.pep
MFRMRPDIKNFYIERGVAYTEDREVVRQLTISGSRRFLKYQLLKYFSIFG
KVEKLHWKKKKRSGSVLFYEATHAAKALYCTKHTIDGHDLYLQASTSWHP
TPVEESGTLSAYDLPITDDIWWKVLDYLSLNERLNFAASCERFQAIYELD
SHRINHVLNMKDVCTLTHRVIKRLMLLSGKHIHCVTGGPLHPNWPYLTEF
VQLLGVSCPNLTELSFFKISVSLAHMTHLFDGANGLINITNISLRRCNLK
DAHIYCLQMLSKLKSLDIRENFSIKGDSLKSLPISLEILNVSGCVDLSPK
CLIQLAALSHLRELRCPGIVKFAKDNELYGRLAHYCPMLEVLELTDFMNV
IQLGGLSRLHTLVIHSSAQLDYHVNNVLLTSIAESYSLRHLEILDSFGPM
SDTSFDLSIFSQLKELRTLILHNQNFTTLHLMGLQKLSTLEFLDLSGSPN
LSNEVVAKLTKSLSGLRRLKVDFCPLITRQLTKILEGNPKLQVDF*

GH16156.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 11:57:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF22436-PA 552 GF22436-PA 1..504 1..485 776 37.5 Plus
Dana\GF13243-PA 1139 GF13243-PA 8..495 6..472 295 24.3 Plus
Dana\GF13243-PA 1139 GF13243-PA 621..994 73..441 206 26.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 11:57:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21665-PA 502 GG21665-PA 1..501 1..494 1512 60.2 Plus
Dere\GG19164-PA 430 GG19164-PA 45..417 118..488 457 34.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 11:57:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH22715-PA 647 GH22715-PA 7..507 6..481 347 25.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:01:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG14891-PA 495 CG14891-PA 1..495 1..495 2572 100 Plus
CG15056-PA 399 CG15056-PA 13..378 118..481 435 33.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 11:57:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15616-PA 669 GI15616-PA 4..506 2..481 388 29.7 Plus
Dmoj\GI18500-PA 458 GI18500-PA 3..434 9..421 328 28 Plus
Dmoj\GI13335-PA 533 GI13335-PA 7..475 9..481 266 27.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 11:57:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11831-PA 627 GL11831-PA 4..498 2..482 261 25.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 11:57:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA25138-PB 628 GA25138-PB 4..498 2..482 263 25.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 11:57:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15167-PA 56 GM15167-PA 1..56 1..56 159 57.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 11:57:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD19110-PA 492 GD19110-PA 1..492 1..495 1705 69.5 Plus
Dsim\GD17393-PA 675 GD17393-PA 293..652 121..478 445 33.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 11:57:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21363-PA 656 GJ21363-PA 16..527 6..493 392 27.6 Plus
Dvir\GJ17296-PA 673 GJ17296-PA 4..516 2..481 344 28.3 Plus
Dvir\GJ11965-PA 532 GJ11965-PA 12..473 15..481 249 26.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 11:57:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15085-PA 529 GK15085-PA 13..484 12..481 342 26.7 Plus
Dwil\GK19510-PA 659 GK19510-PA 4..525 2..495 340 25.9 Plus
Dwil\GK15890-PA 529 GK15890-PA 35..463 48..482 324 27.8 Plus
Dwil\GK23215-PA 540 GK23215-PA 11..499 6..481 280 25.9 Plus
Dwil\GK15056-PA 176 GK15056-PA 13..176 12..143 169 30.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 11:58:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24575-PA 65 GE24575-PA 1..63 432..494 190 60.3 Plus