Clone GH16214 Report

Search the DGRC for GH16214

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:162
Well:14
Vector:pOT2
Associated Gene/TranscriptMbs-RE
Protein status:GH16214.pep: gold
Preliminary Size:1879
Sequenced Size:1892

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG32156 2001-07-04 Blastp of sequenced clone
CG32156 2003-01-01 Sim4 clustering to Release 3
Mbs 2008-04-29 Release 5.5 accounting
Mbs 2008-08-15 Release 5.9 accounting
Mbs 2008-12-18 5.12 accounting

Clone Sequence Records

GH16214.complete Sequence

1892 bp (1892 high quality bases) assembled on 2001-07-04

GenBank Submission: AY051508

> GH16214.complete
ATCATCTCAGTTCGATTCAGTTCAGATCACCCAAACCCAGCTAATCCAAT
CAAACAAGTCTAAATCTCAATTTTCCATCAGCGAGATGTCCTTTCGCTCG
AGATCAAGAACCCAGGCGCCCCTGTCCAGTCGGCGGCGATCGTTGTCCTC
CAGTTCGCGAATGGCTCCATCAAGTGGTGGTTCCGGGGCCTATAACTACA
ACGGAAGTAGCTATAGCAGCTCCGGCAGCACTGGTCGTCCCCTGAGCACG
GGCTACTTTCCCAGCAGCAGTAGCGCCTCCAGTTACCAGAGTCCCTATGC
CAGTGTGTACAGCTCGAGGGAGAGCTTGTACGGCGGAGGAGGTGCTGGTC
GGAGTTCTTATGGCAGCGGTGGTGGTGGATACGACAGTTCCAGGTACAAT
CCCAGTTCCTATTCCTCGGCGGGATCTTCGTACTCCACAAGCGATCGATA
TGTCAGCCCCTATTCGAGTAGTTATGATAAGGGTGTGACCACCGCTTCGC
TGACCTTCAAGTCGCCCGGTTTGAGTTCGTCCAATTCGTTCAAGAGTTCT
CGTTTACTGAAGACCAAATCACTGTCAGCATCAAATAGCAGCCTGAATGG
TGCCTATGGTGGTCCATCCTCGAATGGGGTAACCAGTGCCGGAGCCACTG
TGGCCGCCATCGCAGCCACAAGGAGCAACTCTTTGCGGGAACAGGAGCGC
AAGTCTCGCAATCGCACGCGGTCGAAGAGTGCGGCACAGAGATCCATTAG
TGCTTCCTCAGAGAAGAGTGAAGGATATGAAAGTGGCAGTGAGCGGACAT
CCCGTTCCCGGCTGGGCAGCACCGCGAGTACGGCCACCACCAGCGAGTCA
AAGAGCTCCAGCAGCAATGACAAGACGGAGAATGGCGATGGCATTGACTA
CAAGGCGCTCTGGGAAGCGGAAAAATTGGAGAACGATAAGCTGAGGCAGA
TGCTCAAGCAGAAGGACGATGAAGCCGTCCAGACACGTGCAACACTCGAG
AGATTCGCCAATGCCACAACGAAAAATTCACTATCTGAACTTGAGAAACG
CGAAAGAAGAGCTATGGAACGCAAGCTTTCCGAGTTGGAAGAAGAGCTCA
AGCTATTGCAGAAGCTAAAGACTGAGAACGATCGTCTGCGAGCCGAGAAT
CGGGCCCTAACGCGGGTCGTCTCCAAGCTGACCACCTCGGCTCAGAGTCA
GCTGGCCAAGAGCAAATAGGCGCAGATCAGAAAAGCATTTAGATTGCCCA
GCACCAGCCCACATGCACCCCAAAATTCTCACGCCCCCTTGCTCACGAAG
CACAATGTCGCGAATATCGTTATATCGTTTCTATTAGAACTGGAAAAGCA
TCGATGTTTTTGCCAGGCCAACATCAATAACCAATAATCATCGATGTTTT
TCTTGCTCCTGGTTCGTTACAATACAATACTAAACACACTTCGATGTCGT
TAAAAAAATTATATGGATATTTAAGCATAACCGAAAACACAATAACTAAA
TGTATCGTAGCTAAAATTAAGTTCACATTGAGCTCATTGGCTTTGGACTG
GTCACTGGTAATATAAAACTTTAACAATACTATATACTACTACTCCTTGG
GAGTTACTATATACTACGGGCCCTTTGATAGAATGGCAATCGTCAAAAGT
AGTTAATTTTTTAATAGTAAAATATTAATCACACGCCTTGTTCGTTTTTG
GTAATCTACGAAAATCGCTAGGTGCAATTGTTTCTAATTTGAAATCATAT
TATATGGTTACTACAGACCACTGTACGGTTGATAAGTATTTGTAAATCAA
AAGTTAGCCCACTCTCAAATCAAAATAAAGCTCATCGAAACCAACGAGAT
CAAACATCAAGTCCCCACCACCAAAAAAAAAAAAAAAAAAAA

GH16214.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:35:42
Subject Length Description Subject Range Query Range Score Percent Strand
Mbs-RE 1921 Mbs-RE 34..1917 1..1884 9420 100 Plus
Mbs-RF 2407 Mbs-RF 34..1136 1..1103 5515 100 Plus
Mbs-RJ 4946 Mbs-RJ 3358..3679 782..1103 1610 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 13:03:57
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 16068588..16069359 1101..1872 3785 99.4 Plus
chr3L 24539361 chr3L 16065989..16066408 362..781 1980 98.1 Plus
chr3L 24539361 chr3L 16065234..16065525 72..363 1430 99.3 Plus
chr3L 24539361 chr3L 16066755..16066897 782..924 700 99.3 Plus
chr3L 24539361 chr3L 16066965..16067055 925..1015 455 100 Plus
chr3L 24539361 chr3L 16067496..16067582 1016..1102 435 100 Plus
chr3L 24539361 chr3L 16063161..16063231 1..71 355 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:55:09 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 13:03:55
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 16078818..16079601 1101..1884 3920 100 Plus
3L 28110227 3L 16076229..16076648 362..781 2100 100 Plus
3L 28110227 3L 16075474..16075765 72..363 1460 100 Plus
3L 28110227 3L 16076982..16077124 782..924 715 100 Plus
3L 28110227 3L 16077192..16077282 925..1015 455 100 Plus
3L 28110227 3L 16077723..16077809 1016..1102 435 100 Plus
3L 28110227 3L 16073400..16073470 1..71 355 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:57:23
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 16071918..16072701 1101..1884 3920 100 Plus
3L 28103327 3L 16069329..16069748 362..781 2100 100 Plus
3L 28103327 3L 16068574..16068865 72..363 1460 100 Plus
3L 28103327 3L 16070082..16070224 782..924 715 100 Plus
3L 28103327 3L 16070292..16070382 925..1015 455 100 Plus
3L 28103327 3L 16070823..16070909 1016..1102 435 100 Plus
3L 28103327 3L 16066500..16066570 1..71 355 100 Plus
Blast to na_te.dros performed 2019-03-16 13:03:55
Subject Length Description Subject Range Query Range Score Percent Strand
P-element 2907 P-element PPI251 2907bp AKA(V01520,X69493) Derived from X06779 (g58305) (Rel. 49, Last updated, Version 8). 2562..2749 1436..1614 116 55.3 Plus

GH16214.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 13:04:36 Download gff for GH16214.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 16065234..16065524 72..362 99 -> Plus
chr3L 16063161..16063231 1..71 100 -> Plus
chr3L 16065990..16066408 363..781 98 -> Plus
chr3L 16066755..16066897 782..924 99 -> Plus
chr3L 16066965..16067055 925..1015 100 -> Plus
chr3L 16067496..16067582 1016..1102 100 -> Plus
chr3L 16068590..16069359 1103..1872 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:26:08 Download gff for GH16214.complete
Subject Subject Range Query Range Percent Splice Strand
Mbs-RE 1..1134 86..1219 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:15:01 Download gff for GH16214.complete
Subject Subject Range Query Range Percent Splice Strand
Mbs-RE 1..1134 86..1219 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:59:12 Download gff for GH16214.complete
Subject Subject Range Query Range Percent Splice Strand
Mbs-RE 1..1134 86..1219 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:12:50 Download gff for GH16214.complete
Subject Subject Range Query Range Percent Splice Strand
Mbs-RE 1..1134 86..1219 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:24:57 Download gff for GH16214.complete
Subject Subject Range Query Range Percent Splice Strand
Mbs-RE 34..1905 1..1872 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:26:08 Download gff for GH16214.complete
Subject Subject Range Query Range Percent Splice Strand
Mbs-RE 34..1905 1..1872 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:15:01 Download gff for GH16214.complete
Subject Subject Range Query Range Percent Splice Strand
Mbs-RE 35..1906 1..1872 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:59:12 Download gff for GH16214.complete
Subject Subject Range Query Range Percent Splice Strand
Mbs-RE 34..1905 1..1872 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:12:50 Download gff for GH16214.complete
Subject Subject Range Query Range Percent Splice Strand
Mbs-RE 35..1906 1..1872 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:04:36 Download gff for GH16214.complete
Subject Subject Range Query Range Percent Splice Strand
3L 16073400..16073470 1..71 100 -> Plus
3L 16075474..16075764 72..362 100 -> Plus
3L 16076230..16076648 363..781 100 -> Plus
3L 16076982..16077124 782..924 100 -> Plus
3L 16077192..16077282 925..1015 100 -> Plus
3L 16077723..16077809 1016..1102 100 -> Plus
3L 16078820..16079589 1103..1872 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:04:36 Download gff for GH16214.complete
Subject Subject Range Query Range Percent Splice Strand
3L 16073400..16073470 1..71 100 -> Plus
3L 16075474..16075764 72..362 100 -> Plus
3L 16076230..16076648 363..781 100 -> Plus
3L 16076982..16077124 782..924 100 -> Plus
3L 16077192..16077282 925..1015 100 -> Plus
3L 16077723..16077809 1016..1102 100 -> Plus
3L 16078820..16079589 1103..1872 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:04:36 Download gff for GH16214.complete
Subject Subject Range Query Range Percent Splice Strand
3L 16073400..16073470 1..71 100 -> Plus
3L 16075474..16075764 72..362 100 -> Plus
3L 16076230..16076648 363..781 100 -> Plus
3L 16076982..16077124 782..924 100 -> Plus
3L 16077192..16077282 925..1015 100 -> Plus
3L 16077723..16077809 1016..1102 100 -> Plus
3L 16078820..16079589 1103..1872 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:15:01 Download gff for GH16214.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 16069330..16069748 363..781 100 -> Plus
arm_3L 16070082..16070224 782..924 100 -> Plus
arm_3L 16070292..16070382 925..1015 100 -> Plus
arm_3L 16070823..16070909 1016..1102 100 -> Plus
arm_3L 16066500..16066570 1..71 100 -> Plus
arm_3L 16068574..16068864 72..362 100 -> Plus
arm_3L 16071920..16072689 1103..1872 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:37:03 Download gff for GH16214.complete
Subject Subject Range Query Range Percent Splice Strand
3L 16068574..16068864 72..362 100 -> Plus
3L 16069330..16069748 363..781 100 -> Plus
3L 16070082..16070224 782..924 100 -> Plus
3L 16070292..16070382 925..1015 100 -> Plus
3L 16070823..16070909 1016..1102 100 -> Plus
3L 16071920..16072689 1103..1872 100   Plus
3L 16066500..16066570 1..71 100 -> Plus

GH16214.hyp Sequence

Translation from 0 to 1218

> GH16214.hyp
SSQFDSVQITQTQLIQSNKSKSQFSISEMSFRSRSRTQAPLSSRRRSLSS
SSRMAPSSGGSGAYNYNGSSYSSSGSTGRPLSTGYFPSSSSASSYQSPYA
SVYSSRESLYGGGGAGRSSYGSGGGGYDSSRYNPSSYSSAGSSYSTSDRY
VSPYSSSYDKGVTTASLTFKSPGLSSSNSFKSSRLLKTKSLSASNSSLNG
AYGGPSSNGVTSAGATVAAIAATRSNSLREQERKSRNRTRSKSAAQRSIS
ASSEKSEGYESGSERTSRSRLGSTASTATTSESKSSSSNDKTENGDGIDY
KALWEAEKLENDKLRQMLKQKDDEAVQTRATLERFANATTKNSLSELEKR
ERRAMERKLSELEEELKLLQKLKTENDRLRAENRALTRVVSKLTTSAQSQ
LAKSK*

GH16214.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 08:05:46
Subject Length Description Subject Range Query Range Score Percent Strand
Mbs-PE 377 CG32156-PE 1..377 29..405 1843 100 Plus
Mbs-PF 367 CG32156-PF 1..366 29..394 1733 96.4 Plus
Mbs-PQ 1111 CG32156-PQ 686..1111 47..405 745 47.7 Plus
Mbs-PJ 1101 CG32156-PJ 686..1100 47..394 635 43.3 Plus
Mbs-PI 1144 CG32156-PI 729..1143 47..394 635 43.3 Plus

GH16214.pep Sequence

Translation from 85 to 1218

> GH16214.pep
MSFRSRSRTQAPLSSRRRSLSSSSRMAPSSGGSGAYNYNGSSYSSSGSTG
RPLSTGYFPSSSSASSYQSPYASVYSSRESLYGGGGAGRSSYGSGGGGYD
SSRYNPSSYSSAGSSYSTSDRYVSPYSSSYDKGVTTASLTFKSPGLSSSN
SFKSSRLLKTKSLSASNSSLNGAYGGPSSNGVTSAGATVAAIAATRSNSL
REQERKSRNRTRSKSAAQRSISASSEKSEGYESGSERTSRSRLGSTASTA
TTSESKSSSSNDKTENGDGIDYKALWEAEKLENDKLRQMLKQKDDEAVQT
RATLERFANATTKNSLSELEKRERRAMERKLSELEEELKLLQKLKTENDR
LRAENRALTRVVSKLTTSAQSQLAKSK*

GH16214.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:49:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23761-PA 1129 GF23761-PA 995..1127 232..365 570 85.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:49:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15946-PA 1143 GG15946-PA 1013..1141 237..365 543 90.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:49:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16060-PA 1154 GH16060-PA 1019..1152 233..365 453 78.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:10:34
Subject Length Description Subject Range Query Range Score Percent Strand
Mbs-PE 377 CG32156-PE 1..377 1..377 1843 100 Plus
Mbs-PF 367 CG32156-PF 1..366 1..366 1733 96.4 Plus
Mbs-PQ 1111 CG32156-PQ 686..1111 19..377 745 47.7 Plus
Mbs-PJ 1101 CG32156-PJ 686..1100 19..366 635 43.3 Plus
Mbs-PI 1144 CG32156-PI 729..1143 19..366 635 43.3 Plus
Mbs-PL 1230 CG32156-PL 815..1229 19..366 635 43.3 Plus
Mbs-PO 1273 CG32156-PO 858..1272 19..366 635 43.3 Plus
Mbs-PM 1243 CG32156-PM 857..1242 19..366 459 36.5 Plus
Mbs-PN 1245 CG32156-PN 859..1244 19..366 459 36.5 Plus
Mbs-PG 795 CG32156-PG 484..794 34..366 442 38 Plus
Mbs-PK 860 CG32156-PK 549..859 34..366 442 38 Plus
Mbs-PH 925 CG32156-PH 614..924 34..366 442 38 Plus
sbb-PE 929 CG5580-PE 303..543 11..266 175 28.6 Plus
sbb-PC 929 CG5580-PC 303..543 11..266 175 28.6 Plus
sbb-PF 939 CG5580-PF 313..553 11..266 175 28.6 Plus
sbb-PH 2302 CG5580-PH 303..543 11..266 175 28.6 Plus
sbb-PD 2302 CG5580-PD 303..543 11..266 175 28.6 Plus
sbb-PG 2312 CG5580-PG 313..553 11..266 175 28.6 Plus
sbb-PJ 2330 CG5580-PJ 313..553 11..266 175 28.6 Plus
Alh-PD 1323 CG1070-PD 219..497 1..261 170 30.4 Plus
Alh-PL 1332 CG1070-PL 219..497 1..261 170 30.4 Plus
Alh-PA 1376 CG1070-PA 272..550 1..261 170 30.4 Plus
Alh-PK 1385 CG1070-PK 272..550 1..261 170 30.4 Plus
Alh-PP 1717 CG1070-PP 272..550 1..261 170 30.4 Plus
CG9915-PC 820 CG9915-PC 159..496 2..321 163 28.4 Plus
CG9915-PB 820 CG9915-PB 159..496 2..321 163 28.4 Plus
Mur29B-PA 555 CG31901-PA 91..385 7..271 159 28.1 Plus
CG9915-PC 820 CG9915-PC 79..316 4..264 156 29.7 Plus
CG9915-PC 820 CG9915-PC 113..402 4..264 156 28.2 Plus
CG9915-PB 820 CG9915-PB 79..316 4..264 156 29.7 Plus
CG9915-PB 820 CG9915-PB 113..402 4..264 156 28.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:49:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12323-PA 1163 GI12323-PA 1028..1161 232..365 511 80.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:49:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL25085-PA 325 GL25085-PA 142..325 196..377 661 90.8 Plus
Dper\GL25085-PA 325 GL25085-PA 1..85 1..81 150 64.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:49:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA16721-PA 1157 GA16721-PA 1020..1155 232..365 514 80.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:49:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25580-PA 1147 GM25580-PA 1017..1145 237..365 541 90.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:49:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14592-PA 1147 GD14592-PA 1017..1145 237..365 541 90.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:49:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK24133-PA 394 GK24133-PA 1..393 1..366 765 68.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:49:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE22289-PA 1105 GE22289-PA 975..1103 237..365 530 89.1 Plus
Dyak\GE22286-PA 285 GE22286-PA 1..100 1..100 232 93 Plus