BDGP Sequence Production Resources |
Search the DGRC for GH16255
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 162 |
Well: | 55 |
Vector: | pOT2 |
Associated Gene/Transcript | jeb-RA |
Protein status: | GH16255.pep: gold |
Preliminary Size: | 5685 |
Sequenced Size: | 4492 |
Gene | Date | Evidence |
---|---|---|
CG30040 | 2001-07-04 | Blastp of sequenced clone |
jeb | 2008-04-29 | Release 5.5 accounting |
jeb | 2008-08-15 | Release 5.9 accounting |
jeb | 2008-12-18 | 5.12 accounting |
4492 bp (4492 high quality bases) assembled on 2001-07-04
GenBank Submission: AY060310
> GH16255.complete ATCCTGCTGAGACGACACGACGAGTCCTTGCTCGTCGGTTCAAACGTGCG GAACACTCTTGGAGCCAGGCGATAAAAAAGAATATAACAAAAAAAAAAAA AAATATACACACTAGTAGCAAAGCTAGTCCACTAAAACATCACTCACCCA GAACAAGGGAAAGTTTTCACACCACAAACGAAAGCTGAATAACAACACAA GAAAATTATATACCCAAGAAACCAAAGTGCCGCGAACAAAAACTAACTAA TAAGCCTAAGGTCTAAATCGAAATCGAGTGGACTGGCCAGTGAAAAGAAG AACGCCAAGTTAAGTGCCCGAAAAAATATACAGATAATATCGAAAAATAA CGAAACCATAAACAACGGTCGTTGCAAGGCATCCACAAAAACGCGATAGC CAAAAAGTTTGAAAAAGAAAAAAAAAACACACACACACAAATTTGGAAAA GTTCGAAATTTTCGAAAAAACTTCGTTCGGTGCAGGCCAGTGTAGTGCAA TGCCAGGCTTAGGCCGGCACAGTGTTGGTCAGCGGTGTGGGGCCTGAAGA CCCACAAAAGCCGTGTGTGCAAAGCATCGAAAGTCCAGAGAGAAACATTG ATATCGGGACTTTCCCTCACCACCATTCACCGCCACCAGCCCCGAAAAAC CACCTGCCACCAGTCTCTATAACTCCCGCCCCCACCCCCAAACACCATCC CCCCGGACTAGCAAACTAACTGTATTTTCCCCTTGGTAAACCCCCTGGTA AACCCGAAACCGCCAAGATAAGCCGTCTAATCGAGAAGCTGCGCCAGACC AACAAACGGAAAATGTTCTGCTCGCTGGCCCAGACGCTCTTCTGCGTCCT GCTCATACAGGGCGGCCTCTATGCCCTCCATCTGAGCGGAAACGGAAATG GCAACGGGAACGGGAATGGGAACGGCGAGAAGTCGCTGGGCGAAGCCAAG GCAGTGCAGGTGCCCAGTCATCCCGTTGGACCCTCGACGGGAGTAGCCGC CGCCTGGCAGACCGCACCCTCGCAGCAGCAGCAGCACCAACAGCATCCCG GAGGATCTCCGCCCGGCGGTGGATCCTCGCCGCATGGCCATCGGTCCGCC GCAGCGGCCGCCTTCGATGCCACCACCGTGCGGCTGAACAAGGAGATAGC GGATATGGCCCAGCTGGAGCGAGAGCGACTAATGCTCCTGGCCCGCGCCA AGCAGACGGCGGAACAGCCGCCGGCGGGCAGTAATCATCGCGGTCATCCC TTCATTGCCGGCCGGATACAGATGCAGCCCAGCGAGGAGCTGGAAGTGGG CGACTATCCGGCGCTGTTGCAGCAGGCCGCACGGGGCTACATCTTCGGTA ATGTGCAGAAGCAACCACCGACGCCGGTTACCCTGGAACAGGATTATGAG CAGCTGAGGGATCTGGAGAATAGACCCGTTAAATACTACGGAAGAGTGGT GCAGCCAGCGGAGAGGGAGGAGCAGGTGGAGGCTCTCTACGAACCGCTGC ACTCGTTCGGCGACTTTGATGACTTCTCGGAACTGGAGCAGGAACCGCAG GAGCCGCACTTGGGCGAGGATGAGTTGCTGCGTGAACTGGATGCCTATCA ATATCACGGCCTGGAGGACGAAACCCTTCCGGAGAATCCCTATCGCACGC TGGAGCAATTGGAGCTGGGTGCACCCGACTCCCTGCAGCAGCTCTTCGAG CAGGAACAGGAGCAGCGAGATGCCCCCTTCAAGGCGATGCACACCGGCAA AATCCACAACCCGGGCAACTACAACATAAGGGTGCAGCAAAAGTGGGCGA GGAAACGAAATGGCCAGGGCATTGCCCATAATCCTGAGGCGGAAAAGCAG CTGCAGCGCCAGATCTTCGCCCAGCACTTCAAGCCACAGCGCAATGGCAA ACTATCGCTGTCCGCCAACTCCGAGGCCACGGCCAGCAAGCACCTGAAAC CATCCACTCGCTCCGGCTCCAAGGATAACGAGAAGCCACATAGCGAGCTA GGTAGCAGTGCATCCTCGGCCGTCTCCTCCGCCACTTCTTCCTCCGGCAA ACAAGCCGCCGGCGATGGACTACCTAAACAGCAGCAGGTGGAGCAACAGT CGCAGCAGGACAAAAAGGATCCCAGCCATAAGCGATCCGGTTCCGGATCG GCGGGATCCATGGGATCGCCAGGAGGCGGTTACTCAGCGCAGCCACCGAT TTCACACAGCATAGCCAGCCAGCTGATGCTGCGCACCGCCCGCGGTCAAC GGCAATACGATGTGCCACAAATCGAGTGTCCTACCGCCATGGATGGCATG GAGCGATTCGCCTGTCCGATTCCCGACCGGCAGGGCAGATACCGCTGCAT AGACGATCATGTGCTGTGCGATGGCTTCATCGACTGTCCCGATGGCGAGG ACGAGGACCGAAGATCCTGCATGTTCTACAAGACGACGAAGGCCCATCTG GATGTGTTAGCGGATGCGTTACTACGCTGGGCGCGAGGGCGTTAAGCTCC ACCCACCCACCAACCACACACACACATACACACACACACACCGTCTAATA CACAGCACACACAGAGAAAATACACCTAGCGAACTCACATTGACAAACAA TTAGTTTTAACATGTCGCCCCAAGCAAACAAGAACCCTGTTAAGTTAAAC ATTATCCTGGAACCAGACACACAGACAAGCCACAAACCACCCGCCTATCC TTTGATGTCCTTCATGAGAAAGATTTTCCCGAGCAAATACCGTAAAAAAA TCCCCAGCCACACAAAAATTCAGCTCGCAATGGGCTAAATGGACAATTGC CAAGTATGAAAAGCGAAAGCTATGATTAAAAACAAAGTGAGGCAGAAAAT GTGCTTGACGAAAGGTATGATTATTATTACACTATTATTATTAAAAAAAA TTAACTTAATGAAAAGCCCAAGCAGAAGAAGCAGTTATACATACTAAAGC TAAATTACAATTCAGCAAAAGGACAAAAAAAAAACGATGTTTTTTTCATT TTCAAACTTGTTTCGCAGGAACAGAAAACATAATGAGGAAAAACAAAATT GGGCCTAACTATATTTAGTATATATTAAATAAATATATTATAAATATATC TTACTATATGAAATATATTTCGTGTACATTATTTAATTATACGTGTATTA AAGTTAAATAATGTTAATGTTAAATAAACAAATGAAATGAAATGAAATCA AAACGAAGCAAGCAAAAAGAAAAAAAGCGATAAAAATAACGATGAGGCAG CAAGCAGAAGACGAATGAATTATATATACATATACACAGAAAAAAACCGA CATTAAATATATATTAATAGTATACATATACCAATAACAAACAAATATAC AATTGAAGAAAATATTGCATTAGGTTTTATTGCTGATAACTGAACAAGCT AACGAGTGCAATATAATATACTTATATACAATGCAATAACAGCAAGATTA GCGACAAAAACAAACATTTACAACTTATGAGAATGAAGCAAACATTTACA TAAAGAAAAAGACTTGACTTCATTGAAAACCCAATTAAGTTTCTATAGTA CTCAGATACTTTTGGTTTTGAACTTCAACTCTCGTTGTTAGTAATACGTT TGCCATTATAGATGATTTGCTCCGATTCTTTGTCCTTCATGTTTGTAAAT AATACTTTCAATTATCCTTTTCGTTTGCCTGTAAGGATCTCTCCCCCTCC ATACCACAGTTTTTGATTTCGTTCATGAGTGACAACAGTTCTCACGGAAA TGGCAGCTATCTGTAGTTAAGTAAATTTATTTACATAATTGAACTATGTT TAAATAACAATGGACTTATAAATATATATATCTATATATATATATATATA TATAAAACGATAAGCTTATAAGCGAAACGAAAAGCTTGTACAAATGCTAA CTAACACTAATCCATTCTCGACCTTTTTTCGAAGCCACAAGTGTTTATTC CTAATCGATTTTTGCATTAGTTTTTTATTCGCGCTGTTTTTCTCGATTGG AAAAGCTGAAACTCAACCTTAAAACTCAACCAACAATGTTATCTGGTCCA TGAAAATTATTCGCTATTATTATGCCTGTTAAGTGGCGAGTTTCCAACAC AATCAATCAATTATGAAATACAATCAAGCAAATTTTTAAGCCGAAATTTA CAAATTAAAATTTTTAAACGGTTGTGTACGCAAACAAATGACAGCGGCAA AAGCAAAAAGCGCAAGATAATACCAATGGCGAATTAACAATAATAATGAA TAACCTCTAGAGCGATTTTCACATACTGCATTTCCCGCGTTTTCCCCCGA ATTTCCGCATTAATTTCCGCATTTCATTCAATTGAAATATTGAAACACGG CAAGCAAGCGTTTTAATCGCGATTGACTTTGTGGACTTAATCAATCGATA ATTGGTGTCATTTATTTTTTTGCACGTATGTATTTGCATGTTACTAAATC GATTCGTGTGAATTGCTAAATCCTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 8003793..8006066 | 2274..1 | 11265 | 99.7 | Minus |
chr2R | 21145070 | chr2R | 7977851..7979887 | 4474..2435 | 9840 | 99.3 | Minus |
chr2R | 21145070 | chr2R | 7979965..7980126 | 2435..2274 | 810 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 12116599..12118872 | 2274..1 | 11355 | 100 | Minus |
2R | 25286936 | 2R | 12090622..12092669 | 4482..2435 | 10225 | 100 | Minus |
2R | 25286936 | 2R | 12092747..12092908 | 2435..2274 | 810 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 12117798..12120071 | 2274..1 | 11355 | 99.9 | Minus |
2R | 25260384 | 2R | 12091821..12093868 | 4482..2435 | 10225 | 99.9 | Minus |
2R | 25260384 | 2R | 12093946..12094107 | 2435..2274 | 810 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
McClintock | 6450 | McClintock McCLINTOCK 6450bp | 824..1183 | 3013..3353 | 191 | 56.6 | Plus |
Dana\Tom | 7060 | Dana\Tom DNTOMRETA 7060bp Derived from Z24451 (Rel. 44, Last updated, Version 6). | 583..902 | 3172..3508 | 129 | 54.8 | Plus |
HMS-Beagle | 7062 | HMS-Beagle Beagle 7062bp | 1165..1194 | 2866..2895 | 123 | 90 | Plus |
Quasimodo | 7387 | Quasimodo QUASIMODO 7387bp Derived from P1 clones DS08479 & DS07153 by Sue Celniker, 29 March 2001. | 6052..6189 | 3413..3560 | 122 | 60 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 7977851..7979886 | 2436..4474 | 93 | <- | Minus |
chr2R | 7979965..7980125 | 2275..2435 | 100 | <- | Minus |
chr2R | 8003793..8006066 | 1..2274 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
jeb-RA | 1..1683 | 813..2495 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
jeb-RA | 1..1683 | 813..2495 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
jeb-RA | 1..1683 | 813..2495 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
jeb-RA | 1..1683 | 813..2495 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
jeb-RA | 1..1683 | 813..2495 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
jeb-RA | 1..4474 | 1..4474 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
jeb-RA | 1..4474 | 1..4474 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
jeb-RB | 469..4942 | 1..4474 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
jeb-RA | 1..4474 | 1..4474 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
jeb-RB | 469..4942 | 1..4474 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12090630..12092668 | 2436..4474 | 99 | <- | Minus |
2R | 12092747..12092907 | 2275..2435 | 100 | <- | Minus |
2R | 12116599..12118872 | 1..2274 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12090630..12092668 | 2436..4474 | 99 | <- | Minus |
2R | 12092747..12092907 | 2275..2435 | 100 | <- | Minus |
2R | 12116599..12118872 | 1..2274 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12090630..12092668 | 2436..4474 | 99 | <- | Minus |
2R | 12092747..12092907 | 2275..2435 | 100 | <- | Minus |
2R | 12116599..12118872 | 1..2274 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 7978135..7980173 | 2436..4474 | 99 | <- | Minus |
arm_2R | 7980252..7980412 | 2275..2435 | 100 | <- | Minus |
arm_2R | 8004104..8006377 | 1..2274 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12091829..12093867 | 2436..4474 | 99 | <- | Minus |
2R | 12093946..12094106 | 2275..2435 | 100 | <- | Minus |
2R | 12117798..12120071 | 1..2274 | 99 | Minus |
Translation from 812 to 2494
> GH16255.pep MFCSLAQTLFCVLLIQGGLYALHLSGNGNGNGNGNGNGEKSLGEAKAVQV PSHPVGPSTGVAAAWQTAPSQQQQHQQHPGGSPPGGGSSPHGHRSAAAAA FDATTVRLNKEIADMAQLERERLMLLARAKQTAEQPPAGSNHRGHPFIAG RIQMQPSEELEVGDYPALLQQAARGYIFGNVQKQPPTPVTLEQDYEQLRD LENRPVKYYGRVVQPAEREEQVEALYEPLHSFGDFDDFSELEQEPQEPHL GEDELLRELDAYQYHGLEDETLPENPYRTLEQLELGAPDSLQQLFEQEQE QRDAPFKAMHTGKIHNPGNYNIRVQQKWARKRNGQGIAHNPEAEKQLQRQ IFAQHFKPQRNGKLSLSANSEATASKHLKPSTRSGSKDNEKPHSELGSSA SSAVSSATSSSGKQAAGDGLPKQQQVEQQSQQDKKDPSHKRSGSGSAGSM GSPGGGYSAQPPISHSIASQLMLRTARGQRQYDVPQIECPTAMDGMERFA CPIPDRQGRYRCIDDHVLCDGFIDCPDGEDEDRRSCMFYKTTKAHLDVLA DALLRWARGR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12645-PA | 538 | GF12645-PA | 1..538 | 1..560 | 2055 | 77.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22609-PA | 559 | GG22609-PA | 1..559 | 1..560 | 2412 | 95.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21041-PA | 574 | GH21041-PA | 1..574 | 1..560 | 1502 | 61 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
jeb-PB | 560 | CG30040-PB | 1..560 | 1..560 | 2962 | 100 | Plus |
jeb-PA | 560 | CG30040-PA | 1..560 | 1..560 | 2962 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18644-PA | 586 | GI18644-PA | 1..586 | 1..560 | 1509 | 59.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17386-PA | 570 | GL17386-PA | 1..570 | 1..560 | 1673 | 64.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15598-PA | 567 | GA15598-PA | 1..556 | 1..544 | 1579 | 62.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20388-PA | 551 | GM20388-PA | 1..544 | 1..544 | 2833 | 97.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25042-PA | 473 | GD25042-PA | 1..472 | 1..487 | 2389 | 94 | Plus |
Dsim\GD15249-PA | 68 | GD15249-PA | 1..68 | 493..560 | 405 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21660-PA | 575 | GJ21660-PA | 1..575 | 1..560 | 1557 | 60.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21979-PA | 587 | GK21979-PA | 1..587 | 1..560 | 1528 | 63.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13477-PA | 559 | GE13477-PA | 1..559 | 1..560 | 2843 | 95.7 | Plus |
Translation from 812 to 2494
> GH16255.hyp MFCSLAQTLFCVLLIQGGLYALHLSGNGNGNGNGNGNGEKSLGEAKAVQV PSHPVGPSTGVAAAWQTAPSQQQQHQQHPGGSPPGGGSSPHGHRSAAAAA FDATTVRLNKEIADMAQLERERLMLLARAKQTAEQPPAGSNHRGHPFIAG RIQMQPSEELEVGDYPALLQQAARGYIFGNVQKQPPTPVTLEQDYEQLRD LENRPVKYYGRVVQPAEREEQVEALYEPLHSFGDFDDFSELEQEPQEPHL GEDELLRELDAYQYHGLEDETLPENPYRTLEQLELGAPDSLQQLFEQEQE QRDAPFKAMHTGKIHNPGNYNIRVQQKWARKRNGQGIAHNPEAEKQLQRQ IFAQHFKPQRNGKLSLSANSEATASKHLKPSTRSGSKDNEKPHSELGSSA SSAVSSATSSSGKQAAGDGLPKQQQVEQQSQQDKKDPSHKRSGSGSAGSM GSPGGGYSAQPPISHSIASQLMLRTARGQRQYDVPQIECPTAMDGMERFA CPIPDRQGRYRCIDDHVLCDGFIDCPDGEDEDRRSCMFYKTTKAHLDVLA DALLRWARGR*