BDGP Sequence Production Resources |
Search the DGRC for GH16267
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 162 |
Well: | 67 |
Vector: | pOT2 |
Associated Gene/Transcript | CG17349-RA |
Protein status: | GH16267.pep: gold |
Preliminary Size: | 1193 |
Sequenced Size: | 1116 |
Gene | Date | Evidence |
---|---|---|
CG17349 | 2002-01-01 | Sim4 clustering to Release 2 |
CG17349 | 2002-05-15 | Blastp of sequenced clone |
CG17349 | 2003-01-01 | Sim4 clustering to Release 3 |
CG17349 | 2008-04-29 | Release 5.5 accounting |
CG17349 | 2008-08-15 | Release 5.9 accounting |
CG17349 | 2008-12-18 | 5.12 accounting |
1116 bp (1116 high quality bases) assembled on 2002-05-15
GenBank Submission: AY118792
> GH16267.complete AAAAAACATCCGTGAATATTTTCTACACACCAAACTTAAAATCAAATCTT CCAGACTTGCTTATTACAGACTTTGAAACTGAGGCTCCGCCCGCATCTTG GTTTTTACATTTCTTTTTTTGGACATTAACTGATTTTAGTTCTACTAACA ATGTGCACTAAGACAAACGAACGTGCCACTCGACTTCATGAACCTGGAAG GGTTTGCAGGGAGTTGTTGTACCTCAGGTCGAAGGTGCCAGTACGTGAAG TTCCCGCCTTCACTTTTCAGGCACTGCAGCCTAATACTGTGGTGAAACCT CCTCCAAAGATCGACATTTTCAAGCGGAAGCCAGTGAAGGAGACCGTATT CAAGATCTACTTCAATCGCGGCGACATTCCGTGTGTGATGTCCGGCAGGA GCAGCAAACAGGATCCGACCAAGGAGCGTCCGGTGAAGTGGCACTGTGTG CCGGAGAATCTCGACTATTGCTACTATCTGCCCATCTTCGTGGACGGACT GGCGGACATGGACTACGACACCCGGTTGCTAGCGGTCAACGGAGCCATTG ACCTCATCATGCGGTCCCCCAAAAAGGTGCTACCCGTGCTGCCCAAGCTC ATTCTTCCTCTGAAACGGGCCTTCCAGACGCGCGACAAGCGGATCATCAT CTCCGCCCTCCAAGTCATACAACTGATGGTCCGACTGGGTCCCTGTGTGG GTCAGGCCCTGGTGCCCTTCTATCGCCAGTTGCTGGCCGTGTGCAATCTT TACAAGAACATCAACGTGAATCTGGGAGAGGGTATCGATCCCGATCGAAA CTGCCGCATCGGCGACGTCATCGAGGACACCCTGAAGCTGCTGGAGTACT GCGGAGGCCCCAATGCCTTCATCAACATCAAGTACATGGTGCCCACCTAC GAGAGCAGCGTCTTCCCCAAGTGCGAGGCGCCCGAGCCCCGGGAAGCCTA ACATTTCCCATGGAAATGCCTAACTACCAGTTCGCTTTTCTTCGGCCTTC AGCCTTCAGTTACCAAGAATTTGCGAACGAGTTTTAACCGCCAAATCGAA GTTTGTGAACCTTCAAATCAGGGATGAGTAAAGCCAAAATTAATCATTAA AAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 19370847..19371257 | 688..1098 | 2010 | 99.3 | Plus |
chr2L | 23010047 | chr2L | 19369459..19369840 | 309..690 | 1880 | 99.5 | Plus |
chr2L | 23010047 | chr2L | 19369028..19369263 | 1..237 | 1120 | 99.2 | Plus |
chr2L | 23010047 | chr2L | 19369328..19369400 | 237..309 | 365 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 19372301..19372712 | 688..1099 | 2060 | 100 | Plus |
2L | 23513712 | 2L | 19370926..19371307 | 309..690 | 1910 | 100 | Plus |
2L | 23513712 | 2L | 19370494..19370730 | 1..237 | 1185 | 100 | Plus |
2L | 23513712 | 2L | 19370795..19370867 | 237..309 | 365 | 100 | Plus |
2R | 25286936 | 2R | 19500221..19500261 | 863..903 | 190 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 19372301..19372712 | 688..1099 | 2060 | 100 | Plus |
2L | 23513712 | 2L | 19370926..19371307 | 309..690 | 1910 | 100 | Plus |
2L | 23513712 | 2L | 19370494..19370730 | 1..237 | 1185 | 100 | Plus |
2L | 23513712 | 2L | 19370795..19370867 | 237..309 | 365 | 100 | Plus |
2R | 25260384 | 2R | 19501420..19501460 | 863..903 | 190 | 97.5 | Plus |
2R | 25260384 | 2R | 19501189..19501230 | 706..747 | 150 | 90.4 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 19369028..19369263 | 1..237 | 99 | -> | Plus |
chr2L | 19369329..19369399 | 238..308 | 100 | -> | Plus |
chr2L | 19369459..19369838 | 309..688 | 99 | -> | Plus |
chr2L | 19370848..19371257 | 689..1098 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17349-RA | 1..801 | 151..951 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17349-RA | 1..801 | 151..951 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17349-RA | 1..801 | 151..951 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17349-RA | 1..801 | 151..951 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17349-RA | 1..801 | 151..951 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17349-RA | 17..1114 | 1..1098 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17349-RA | 17..1114 | 1..1098 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17349-RA | 50..1147 | 1..1098 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17349-RA | 17..1114 | 1..1098 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17349-RA | 50..1147 | 1..1098 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 19370494..19370730 | 1..237 | 100 | -> | Plus |
2L | 19370796..19370866 | 238..308 | 100 | -> | Plus |
2L | 19370926..19371305 | 309..688 | 100 | -> | Plus |
2L | 19372302..19372711 | 689..1098 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 19370494..19370730 | 1..237 | 100 | -> | Plus |
2L | 19370796..19370866 | 238..308 | 100 | -> | Plus |
2L | 19370926..19371305 | 309..688 | 100 | -> | Plus |
2L | 19372302..19372711 | 689..1098 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 19370494..19370730 | 1..237 | 100 | -> | Plus |
2L | 19370796..19370866 | 238..308 | 100 | -> | Plus |
2L | 19370926..19371305 | 309..688 | 100 | -> | Plus |
2L | 19372302..19372711 | 689..1098 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 19370796..19370866 | 238..308 | 100 | -> | Plus |
arm_2L | 19370494..19370730 | 1..237 | 100 | -> | Plus |
arm_2L | 19370926..19371305 | 309..688 | 100 | -> | Plus |
arm_2L | 19372302..19372711 | 689..1098 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 19370494..19370730 | 1..237 | 100 | -> | Plus |
2L | 19370796..19370866 | 238..308 | 100 | -> | Plus |
2L | 19370926..19371305 | 309..688 | 100 | -> | Plus |
2L | 19372302..19372711 | 689..1098 | 100 | Plus |
Translation from 150 to 950
> GH16267.hyp MCTKTNERATRLHEPGRVCRELLYLRSKVPVREVPAFTFQALQPNTVVKP PPKIDIFKRKPVKETVFKIYFNRGDIPCVMSGRSSKQDPTKERPVKWHCV PENLDYCYYLPIFVDGLADMDYDTRLLAVNGAIDLIMRSPKKVLPVLPKL ILPLKRAFQTRDKRIIISALQVIQLMVRLGPCVGQALVPFYRQLLAVCNL YKNINVNLGEGIDPDRNCRIGDVIEDTLKLLEYCGGPNAFINIKYMVPTY ESSVFPKCEAPEPREA*
Translation from 150 to 950
> GH16267.pep MCTKTNERATRLHEPGRVCRELLYLRSKVPVREVPAFTFQALQPNTVVKP PPKIDIFKRKPVKETVFKIYFNRGDIPCVMSGRSSKQDPTKERPVKWHCV PENLDYCYYLPIFVDGLADMDYDTRLLAVNGAIDLIMRSPKKVLPVLPKL ILPLKRAFQTRDKRIIISALQVIQLMVRLGPCVGQALVPFYRQLLAVCNL YKNINVNLGEGIDPDRNCRIGDVIEDTLKLLEYCGGPNAFINIKYMVPTY ESSVFPKCEAPEPREA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14715-PA | 266 | GF14715-PA | 1..266 | 1..266 | 1344 | 95.1 | Plus |
Dana\GF11719-PA | 310 | GF11719-PA | 119..306 | 61..252 | 414 | 44.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21171-PA | 266 | GG21171-PA | 1..266 | 1..266 | 1387 | 98.5 | Plus |
Dere\GG21981-PA | 308 | GG21981-PA | 49..304 | 32..252 | 422 | 38.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13446-PA | 274 | GH13446-PA | 6..270 | 2..266 | 1167 | 81.9 | Plus |
Dgri\GH12932-PA | 274 | GH12932-PA | 6..270 | 2..266 | 1163 | 81.5 | Plus |
Dgri\GH23003-PA | 308 | GH23003-PA | 120..304 | 64..252 | 404 | 44.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17349-PA | 266 | CG17349-PA | 1..266 | 1..266 | 1412 | 100 | Plus |
CG15120-PA | 308 | CG15120-PA | 49..304 | 32..252 | 415 | 38.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14007-PA | 274 | GI14007-PA | 6..270 | 2..266 | 1192 | 83.4 | Plus |
Dmoj\GI18969-PA | 305 | GI18969-PA | 111..301 | 58..252 | 411 | 43.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21201-PA | 264 | GL21201-PA | 1..263 | 1..263 | 1237 | 88.2 | Plus |
Dper\GL21291-PA | 312 | GL21291-PA | 54..308 | 32..252 | 404 | 37.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14474-PA | 264 | GA14474-PA | 1..263 | 1..263 | 1231 | 87.8 | Plus |
Dpse\GA13509-PA | 312 | GA13509-PA | 54..308 | 32..252 | 404 | 37.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17338-PA | 266 | GM17338-PA | 1..266 | 1..266 | 1396 | 100 | Plus |
Dsec\GM21969-PA | 308 | GM21969-PA | 49..304 | 32..252 | 421 | 38.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24196-PA | 266 | GD24196-PA | 1..266 | 1..266 | 1396 | 100 | Plus |
Dsim\GD11462-PA | 109 | GD11462-PA | 1..105 | 150..252 | 259 | 51.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18253-PA | 274 | GJ18253-PA | 6..266 | 2..262 | 1176 | 83.9 | Plus |
Dvir\GJ20913-PA | 305 | GJ20913-PA | 49..301 | 32..252 | 408 | 38.2 | Plus |