Clone GH16384 Report

Search the DGRC for GH16384

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:163
Well:84
Vector:pOT2
Associated Gene/TranscriptCG9672-RA
Protein status:GH16384.pep: gold
Preliminary Size:943
Sequenced Size:814

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG9672 2001-01-01 Release 2 assignment
CG9672 2001-11-29 Blastp of sequenced clone
CG9672 2003-01-01 Sim4 clustering to Release 3
CG9672 2008-04-29 Release 5.5 accounting
CG9672 2008-08-15 Release 5.9 accounting
CG9672 2008-12-18 5.12 accounting

Clone Sequence Records

GH16384.complete Sequence

814 bp (814 high quality bases) assembled on 2001-11-29

GenBank Submission: AY069145

> GH16384.complete
AAGCAAAGTGCCATGAAGCTGACCCTCACCATTGGACTAATCCTTGTGGC
CGCCGGAGTTCTGGAGGCCCAGCCGCAGGGCAGGATCGCCGGTGGAGAAG
ATGCCGTTCTCGGCCAGCTGCCCTACCAGGCGGCCCTCTCCATCGGCGGA
AGCTACAACTGCGGCGCCGTGATCATTGGCCAGCGATACGCCCTCACCGC
CCTCTCTTGCGTCTGCTCCGACGGCAAGGATACCCCATGGGCTGCTGTTC
TGTTCGCCGTGACCGTAGGATCGGTGGATCTCTACAATGGCAAGCAGATT
CGCGTGGAGGAGATCACCATTAACCCGAACTACAGCACTCTGAAGACCGG
AATCGCCCTGCTCCGTCTGCAGGAGGAGATTACTTTCAGTGAGACAGTCA
ATGCCATTCCACTCTCCCAGGACGTTCCGCCCATGGGCAGCCAGGTGGAG
GTCTCCGGCTGGGGCCGCACCACCGAGTCCGAGGTGAACATGCATCGCAC
CCTGCAAATAGGAGCCGCCGAGGTGATGGCACCACGCGAATGCGCCCTGG
CCAATCGGGATGAGCTGCTGGTGGCGGACGACCAGGTGCTGTGCCTGGGC
CATGGCCGTCGTCAGGGAATCTGCAGTGGGGACATTGGAGGACCGGCCGT
CTACCAGGGCCAGCTGGTGGGTCTGGGTGCACAGATCCTTGGCGAGTGCG
GCGGAATGCTGCCCGAACGATTCATTAGCATTGCGGCCAACTACGATTGG
ATCCAACAGCAGTTGCAGCAATAAACCAATGTCGATAGCAAAAGCAAAAA
AAAAAAAAAAAAAA

GH16384.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:54:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG9672-RA 1064 CG9672-RA 140..935 1..796 3980 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 15:38:17
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 16595624..16596182 795..237 2795 100 Minus
chrX 22417052 chrX 16596274..16596509 236..1 1180 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:55:21 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 15:38:15
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 16705970..16706529 796..237 2800 100 Minus
X 23542271 X 16706621..16706856 236..1 1180 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:05:03
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 16714068..16714627 796..237 2800 100 Minus
X 23527363 X 16714719..16714954 236..1 1180 100 Minus
Blast to na_te.dros performed on 2019-03-15 15:38:15 has no hits.

GH16384.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 15:39:15 Download gff for GH16384.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 16595624..16596182 237..795 100 <- Minus
chrX 16596274..16596509 1..236 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:45:41 Download gff for GH16384.complete
Subject Subject Range Query Range Percent Splice Strand
CG9672-RA 1..762 13..774 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:01:09 Download gff for GH16384.complete
Subject Subject Range Query Range Percent Splice Strand
CG9672-RA 1..762 13..774 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 01:34:15 Download gff for GH16384.complete
Subject Subject Range Query Range Percent Splice Strand
CG9672-RA 1..762 13..774 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:52:46 Download gff for GH16384.complete
Subject Subject Range Query Range Percent Splice Strand
CG9672-RA 1..762 13..774 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:11:11 Download gff for GH16384.complete
Subject Subject Range Query Range Percent Splice Strand
CG9672-RA 1..762 13..774 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:01:28 Download gff for GH16384.complete
Subject Subject Range Query Range Percent Splice Strand
CG9672-RA 15..809 1..795 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:01:09 Download gff for GH16384.complete
Subject Subject Range Query Range Percent Splice Strand
CG9672-RA 15..809 1..795 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:34:15 Download gff for GH16384.complete
Subject Subject Range Query Range Percent Splice Strand
CG9672-RA 19..813 1..795 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:52:46 Download gff for GH16384.complete
Subject Subject Range Query Range Percent Splice Strand
CG9672-RA 15..809 1..795 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:11:11 Download gff for GH16384.complete
Subject Subject Range Query Range Percent Splice Strand
CG9672-RA 19..813 1..795 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:39:15 Download gff for GH16384.complete
Subject Subject Range Query Range Percent Splice Strand
X 16705971..16706529 237..795 100 <- Minus
X 16706621..16706856 1..236 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:39:15 Download gff for GH16384.complete
Subject Subject Range Query Range Percent Splice Strand
X 16705971..16706529 237..795 100 <- Minus
X 16706621..16706856 1..236 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:39:15 Download gff for GH16384.complete
Subject Subject Range Query Range Percent Splice Strand
X 16705971..16706529 237..795 100 <- Minus
X 16706621..16706856 1..236 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:34:15 Download gff for GH16384.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 16600004..16600562 237..795 100 <- Minus
arm_X 16600654..16600889 1..236 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:01:19 Download gff for GH16384.complete
Subject Subject Range Query Range Percent Splice Strand
X 16714069..16714627 237..795 100 <- Minus
X 16714719..16714954 1..236 100   Minus

GH16384.hyp Sequence

Translation from 0 to 773

> GH16384.hyp
KQSAMKLTLTIGLILVAAGVLEAQPQGRIAGGEDAVLGQLPYQAALSIGG
SYNCGAVIIGQRYALTALSCVCSDGKDTPWAAVLFAVTVGSVDLYNGKQI
RVEEITINPNYSTLKTGIALLRLQEEITFSETVNAIPLSQDVPPMGSQVE
VSGWGRTTESEVNMHRTLQIGAAEVMAPRECALANRDELLVADDQVLCLG
HGRRQGICSGDIGGPAVYQGQLVGLGAQILGECGGMLPERFISIAANYDW
IQQQLQQ*

GH16384.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 08:06:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG9672-PA 253 CG9672-PA 1..253 5..257 1297 100 Plus
spheroide-PA 249 CG9675-PA 9..248 11..255 384 37.2 Plus
CG1304-PA 260 CG1304-PA 3..254 4..252 349 34.1 Plus
CG9676-PA 251 CG9676-PA 9..248 13..254 348 33.3 Plus
Ser6-PA 259 CG2071-PA 30..255 27..253 341 34.5 Plus

GH16384.pep Sequence

Translation from 12 to 773

> GH16384.pep
MKLTLTIGLILVAAGVLEAQPQGRIAGGEDAVLGQLPYQAALSIGGSYNC
GAVIIGQRYALTALSCVCSDGKDTPWAAVLFAVTVGSVDLYNGKQIRVEE
ITINPNYSTLKTGIALLRLQEEITFSETVNAIPLSQDVPPMGSQVEVSGW
GRTTESEVNMHRTLQIGAAEVMAPRECALANRDELLVADDQVLCLGHGRR
QGICSGDIGGPAVYQGQLVGLGAQILGECGGMLPERFISIAANYDWIQQQ
LQQ*

GH16384.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 10:14:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF22291-PA 252 GF22291-PA 1..252 1..252 1005 76 Plus
Dana\GF22294-PA 248 GF22294-PA 19..247 19..251 387 37.4 Plus
Dana\GF22295-PA 255 GF22295-PA 10..252 3..250 354 32.9 Plus
Dana\GF21864-PA 264 GF21864-PA 34..261 23..250 337 34.2 Plus
Dana\GF22653-PA 252 GF22653-PA 27..250 31..250 300 32.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 10:14:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18229-PA 252 GG18229-PA 1..252 1..252 1173 90.1 Plus
Dere\GG18232-PA 251 GG18232-PA 6..248 6..250 344 32.9 Plus
Dere\GG18231-PA 249 GG18231-PA 21..248 20..251 337 32.4 Plus
Dere\GG17565-PA 260 GG17565-PA 29..256 22..250 329 34.2 Plus
Dere\GG17566-PA 259 GG17566-PA 29..256 22..250 328 34.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 10:14:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH12384-PA 235 GH12384-PA 4..235 19..252 837 68.1 Plus
Dgri\GH24521-PA 256 GH24521-PA 4..251 2..248 335 32.8 Plus
Dgri\GH12394-PA 251 GH12394-PA 1..251 1..251 325 30.7 Plus
Dgri\GH12388-PA 269 GH12388-PA 39..262 24..250 315 35.7 Plus
Dgri\GH12386-PA 254 GH12386-PA 22..254 18..253 314 34.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:41:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG9672-PA 253 CG9672-PA 1..253 1..253 1297 100 Plus
sphe-PA 249 CG9675-PA 9..248 7..251 384 37.2 Plus
CG9676-PA 251 CG9676-PA 9..248 9..250 348 33.3 Plus
CG1304-PA 260 CG1304-PA 4..254 1..248 348 34.2 Plus
Ser6-PA 259 CG2071-PA 30..255 23..249 341 34.5 Plus
CG32523-PA 262 CG32523-PA 24..259 12..250 309 33.9 Plus
CG4653-PA 254 CG4653-PA 12..251 5..249 299 28.6 Plus
CG9673-PB 261 CG9673-PB 6..261 5..252 285 30.4 Plus
CG9673-PA 261 CG9673-PA 6..261 5..252 285 30.4 Plus
CG11192-PB 279 CG11192-PB 13..263 10..251 239 27.9 Plus
Ser12-PA 245 CG17240-PA 6..244 3..253 236 29.4 Plus
CG13430-PB 267 CG13430-PB 7..265 2..253 234 27.2 Plus
CG13430-PA 267 CG13430-PA 7..265 2..253 234 27.2 Plus
CG5255-PA 273 CG5255-PA 27..253 22..251 234 33.1 Plus
CG4271-PA 242 CG4271-PA 10..237 16..253 233 29.2 Plus
thetaTry-PA 262 CG12385-PA 22..255 15..247 230 28.5 Plus
lambdaTry-PA 272 CG12350-PA 34..256 23..247 228 28.4 Plus
CG8299-PA 260 CG8299-PA 1..257 3..252 227 26.3 Plus
CG31269-PB 273 CG31269-PB 37..256 24..248 227 34.2 Plus
CG31266-PB 282 CG31266-PB 45..273 18..248 227 32.4 Plus
Ser8-PA 260 CG4812-PA 12..255 3..249 224 28.5 Plus
yip7-PA 270 CG6457-PA 38..266 23..249 223 29.5 Plus
CG4053-PB 265 CG4053-PB 34..255 24..249 222 29.9 Plus
alphaTry-PA 256 CG18444-PA 2..249 1..247 219 25.9 Plus
CG31265-PA 266 CG31265-PA 27..258 15..251 219 30 Plus
Jon65Aiii-PA 274 CG6483-PA 37..267 22..248 218 27.6 Plus
gammaTry-PA 253 CG30028-PA 26..249 20..247 217 27.4 Plus
CG30025-PA 253 CG30025-PA 26..249 20..247 217 27.4 Plus
deltaTry-PA 253 CG12351-PA 26..249 20..247 217 27.4 Plus
CG30031-PA 253 CG30031-PA 26..249 20..247 217 27.4 Plus
Send1-PA 255 CG17012-PA 8..239 3..247 214 26.9 Plus
betaTry-PB 253 CG18211-PB 26..249 20..247 213 26.8 Plus
betaTry-PA 253 CG18211-PA 26..249 20..247 213 26.8 Plus
CG17477-PA 267 CG17477-PA 27..251 25..251 213 29.7 Plus
CG10477-PB 272 CG10477-PB 38..267 23..250 213 27.3 Plus
CG10477-PA 272 CG10477-PA 38..267 23..250 213 27.3 Plus
CG32374-PA 299 CG32374-PA 60..294 13..249 213 27.9 Plus
iotaTry-PA 252 CG7754-PA 6..219 3..221 208 28 Plus
CG7829-PA 253 CG7829-PA 10..251 9..253 206 28.2 Plus
CG8952-PA 276 CG8952-PA 11..263 9..242 205 27.5 Plus
CG17239-PB 248 CG17239-PB 23..211 24..221 203 28 Plus
CG17239-PA 248 CG17239-PA 23..211 24..221 203 28 Plus
CG32271-PA 248 CG32271-PA 20..216 20..221 203 29.6 Plus
CG32834-PB 556 CG32834-PB 7..257 3..252 202 30.6 Plus
CG6462-PA 319 CG6462-PA 76..314 24..250 201 32.2 Plus
epsilonTry-PA 256 CG18681-PA 26..255 20..253 200 26.8 Plus
CG33159-PA 257 CG33159-PA 25..254 24..253 200 26.6 Plus
CG17571-PB 258 CG17571-PB 27..251 21..247 200 27.8 Plus
CG17571-PA 258 CG17571-PA 27..251 21..247 200 27.8 Plus
Jon65Aiv-PA 271 CG6467-PA 36..266 23..248 198 28.5 Plus
CG33160-PA 258 CG33160-PA 29..256 20..253 195 26.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 10:14:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15878-PA 251 GI15878-PA 1..251 1..252 883 66 Plus
Dmoj\GI15881-PA 254 GI15881-PA 5..251 3..250 387 33.3 Plus
Dmoj\GI14724-PA 252 GI14724-PA 16..252 13..251 364 34.4 Plus
Dmoj\GI15880-PA 255 GI15880-PA 15..255 10..253 352 32.1 Plus
Dmoj\GI15500-PA 257 GI15500-PA 25..253 21..250 324 34.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 10:14:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26771-PA 253 GL26771-PA 18..252 18..251 930 74 Plus
Dper\GL26774-PA 255 GL26774-PA 31..254 24..252 318 33.9 Plus
Dper\GL26772-PA 261 GL26772-PA 19..261 16..252 291 31.2 Plus
Dper\GL26773-PA 228 GL26773-PA 26..224 22..248 271 31 Plus
Dper\GL25036-PA 263 GL25036-PA 1..258 1..250 242 28.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 10:14:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA21954-PA 253 GA21954-PA 1..253 1..252 976 72.7 Plus
Dpse\GA23050-PA 252 GA23050-PA 22..248 18..248 329 32.6 Plus
Dpse\GA21958-PA 255 GA21958-PA 31..254 24..252 314 33.5 Plus
Dpse\GA21955-PA 261 GA21955-PA 19..261 16..252 288 30.8 Plus
Dpse\GA18331-PA 249 GA18331-PA 25..247 31..250 286 30.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 10:14:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM13371-PA 200 GM13371-PA 1..200 1..251 917 74.5 Plus
Dsec\GM13374-PA 249 GM13374-PA 9..248 7..251 353 36 Plus
Dsec\GM13375-PA 251 GM13375-PA 9..248 9..250 331 32.5 Plus
Dsec\GM22650-PA 259 GM22650-PA 29..256 22..250 328 34.6 Plus
Dsec\GM22649-PA 260 GM22649-PA 29..256 22..250 318 34.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 10:14:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD15727-PA 252 GD15727-PA 1..252 1..252 1246 94 Plus
Dsim\GD15730-PA 251 GD15730-PA 9..248 9..250 331 32.5 Plus
Dsim\GD15519-PA 259 GD15519-PA 29..256 22..250 325 34.2 Plus
Dsim\GD15729-PA 249 GD15729-PA 9..248 7..251 318 36 Plus
Dsim\GD15518-PA 260 GD15518-PA 29..256 22..250 318 34.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 10:14:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18704-PA 236 GJ18704-PA 4..236 19..252 883 71.9 Plus
Dvir\GJ18708-PA 253 GJ18708-PA 4..250 6..250 365 32.1 Plus
Dvir\GJ18707-PA 252 GJ18707-PA 13..252 11..253 348 34.7 Plus
Dvir\GJ18895-PA 256 GJ18895-PA 6..252 7..250 330 32.5 Plus
Dvir\GJ19438-PA 252 GJ19438-PA 12..252 9..251 316 30.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 10:14:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25503-PA 252 GK25503-PA 1..252 1..252 909 68.5 Plus
Dwil\GK25506-PA 256 GK25506-PA 26..253 22..250 352 33.2 Plus
Dwil\GK25410-PA 246 GK25410-PA 5..242 7..248 320 32.8 Plus
Dwil\GK20044-PA 258 GK20044-PA 24..255 18..250 302 33.3 Plus
Dwil\GK25505-PA 254 GK25505-PA 27..252 22..251 298 30.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 10:14:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15648-PA 252 GE15648-PA 1..252 1..252 1151 87.4 Plus
Dyak\GE15326-PA 259 GE15326-PA 29..256 22..250 347 34.6 Plus
Dyak\GE15325-PA 260 GE15325-PA 29..256 22..250 340 35 Plus
Dyak\GE15650-PA 249 GE15650-PA 12..248 7..251 339 34.1 Plus
Dyak\GE15651-PA 253 GE15651-PA 15..247 13..247 326 34.3 Plus