BDGP Sequence Production Resources |
Search the DGRC for GH16429
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 164 |
Well: | 29 |
Vector: | pOT2 |
Associated Gene/Transcript | RagC-D-RA |
Protein status: | GH16429.pep: gold |
Preliminary Size: | 1577 |
Sequenced Size: | 1552 |
Gene | Date | Evidence |
---|---|---|
CG8707 | 2001-01-01 | Release 2 assignment |
CG8707 | 2001-07-04 | Blastp of sequenced clone |
CG8707 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8707 | 2008-04-29 | Release 5.5 accounting |
CG8707 | 2008-08-15 | Release 5.9 accounting |
CG8707 | 2008-12-18 | 5.12 accounting |
1552 bp (1552 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051510
> GH16429.complete CGATAAGAAACGCGCAGGAAAAGCAGAAAAAGGTAAACTGATCGTGACCG CTATAGCCATTGCCTGTGCGTTTCATGCACACATCCGTTGACCTACGGCC GGCCCCACCCCCAAAACCAGAATCCAGTGGAAGGCGGTAGACTCCGACAG CATGAGCTACGATGATGATGACTATCCGGCGGACACGTTCCCCAAGGACT TTGGCTACCGGGCCTACAACCAGGATGGCCTGGAACTGGAGCCCAATGCA ACGGGCAGCAGCGAGACAAAGCCGCGCATTCTGCTGATGGGAATGCGCAG ATCCGGCAAGAGCTCCATCCAAAAAGTGGTCTTCCACAAGATGTCGCCGA ACGAGACGCTCTTCCTGGAGTCGACCAGTAAGATCGTGAAGGACGACATC AACAACTCCAGCTTTGTGCAGTTCCAGATCTGGGACTTCCCCGGCCAGAT TGACTTCTTCGAGCCGACCTTTGATTCTGACATGATCTTTGGAGGCTGTG GAGCCCTGGTCTTTGTCATCGATGCCAAGGATGACTACAACGAGGCGCTG ACCAAGTTCAAGAACACAGTGCTGCAGGCCTACAAAGTGAACAAGCGCAT CAAGTTCGAGGTGTTTATACACAAGGTGGATGGAATTAGCGACGACTCGA AAATGGAATCGCAGCGGGACATACACCAGCGGTCGTCGGATGACCTTAAC GAGGCTGGCCTCGATCAGATCCACCTGAGTTTCCATCTGACCTCCATATA CGACCACTCCATCTTCGAGGCCTTCTCCAAGGTGGTGCAGAAGCTGATTC CCCAGCTTCCGACGCTGGAGAATCTGCTGAACATTTTTATACCAAACTCC GGAATAGAAAAAGCCTTTCTGTTCGATGTGGTTTCCAAAATTTACATAGC CACGGACTCGTCACCAGTCGATATGCAGACGTATGAGCTCTGCTGCGATA TGATTGACGTGGTCATTGATCTGTCCAGCATATACAGCTCCGAAGAAACC GCCTTTGACAGCGGGAGCTCTAGTCTCATCAAGTTAAACAACAACACGAT ACTCTACCTGCGGGAGGTGAACAAGTTCCTGGCCCTGGTCTGCATCCTGC GCGAGGAGAACTTCAACCGGCAGGGCGTCATCGACTACAATTTCATCTGT TTCCGCGACGCCATCAGCGAGGTATTCGAGCTGCGGCTAAAGCGCCAGAA GCAGCTGGAGAACAACGACCAGGACGACGATGATCTGGTCGATGAGCAGA CCCTGATTCGCCATGGCCACGACGCAGGTGGAATTTCGCGAGCGCAGCCA ATTAATTAGGCGCACTGCATCCCCAAGCGGAGAGCCCCTTTTATTGCCCC CCTACGCTAGCTTCTCTGTGGACTCTTTGATTCCAATTTGTACGTTCTCT TCCGTTAAATCTGATGTTACCTTTGTCTATTGATACGTTAGGACGCCACT CTCACAGAGCAGCGTAAAAAATTGCCCAGCGGTTGAAATTATTGATAATA CTACCAATAAACATGTCTATTTTTAAATACGAGAAAAAAAAAAAAAAAAA AA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RagC-RA | 1714 | RagC-RA | 134..1666 | 1..1533 | 7665 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 4049198..4049746 | 1533..985 | 2745 | 100 | Minus |
chr2R | 21145070 | chr2R | 4050287..4050760 | 627..154 | 2370 | 100 | Minus |
chr2R | 21145070 | chr2R | 4050007..4050227 | 844..624 | 1105 | 100 | Minus |
chr2R | 21145070 | chr2R | 4050841..4050994 | 154..1 | 770 | 100 | Minus |
chr2R | 21145070 | chr2R | 4049805..4049947 | 987..845 | 715 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 8161679..8162227 | 1533..985 | 2745 | 100 | Minus |
2R | 25286936 | 2R | 8162768..8163241 | 627..154 | 2370 | 100 | Minus |
2R | 25286936 | 2R | 8162488..8162708 | 844..624 | 1105 | 100 | Minus |
2R | 25286936 | 2R | 8163322..8163475 | 154..1 | 770 | 100 | Minus |
2R | 25286936 | 2R | 8162286..8162428 | 987..845 | 715 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 8162878..8163426 | 1533..985 | 2745 | 100 | Minus |
2R | 25260384 | 2R | 8163967..8164440 | 627..154 | 2370 | 100 | Minus |
2R | 25260384 | 2R | 8163687..8163907 | 844..624 | 1105 | 100 | Minus |
2R | 25260384 | 2R | 8164521..8164674 | 154..1 | 770 | 100 | Minus |
2R | 25260384 | 2R | 8163485..8163627 | 987..845 | 715 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 4049198..4049743 | 988..1533 | 100 | <- | Minus |
chr2R | 4049805..4049947 | 845..987 | 100 | <- | Minus |
chr2R | 4050007..4050225 | 626..844 | 100 | <- | Minus |
chr2R | 4050289..4050759 | 155..625 | 100 | <- | Minus |
chr2R | 4050841..4050994 | 1..154 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8707-RA | 1..1158 | 152..1309 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RagC-RA | 1..1158 | 152..1309 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RagC-D-RA | 1..1158 | 152..1309 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8707-RA | 1..1158 | 152..1309 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RagC-D-RA | 1..1158 | 152..1309 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8707-RA | 39..1571 | 1..1533 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RagC-RA | 39..1571 | 1..1533 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RagC-D-RA | 26..1558 | 1..1533 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8707-RA | 39..1571 | 1..1533 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RagC-D-RA | 26..1558 | 1..1533 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8163322..8163475 | 1..154 | 100 | Minus | |
2R | 8161679..8162224 | 988..1533 | 100 | <- | Minus |
2R | 8162286..8162428 | 845..987 | 100 | <- | Minus |
2R | 8162488..8162706 | 626..844 | 100 | <- | Minus |
2R | 8162770..8163240 | 155..625 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8163322..8163475 | 1..154 | 100 | Minus | |
2R | 8161679..8162224 | 988..1533 | 100 | <- | Minus |
2R | 8162286..8162428 | 845..987 | 100 | <- | Minus |
2R | 8162488..8162706 | 626..844 | 100 | <- | Minus |
2R | 8162770..8163240 | 155..625 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8163322..8163475 | 1..154 | 100 | Minus | |
2R | 8161679..8162224 | 988..1533 | 100 | <- | Minus |
2R | 8162286..8162428 | 845..987 | 100 | <- | Minus |
2R | 8162488..8162706 | 626..844 | 100 | <- | Minus |
2R | 8162770..8163240 | 155..625 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 4049993..4050211 | 626..844 | 100 | <- | Minus |
arm_2R | 4049184..4049729 | 988..1533 | 100 | <- | Minus |
arm_2R | 4049791..4049933 | 845..987 | 100 | <- | Minus |
arm_2R | 4050275..4050745 | 155..625 | 100 | <- | Minus |
arm_2R | 4050827..4050980 | 1..154 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8162878..8163423 | 988..1533 | 100 | <- | Minus |
2R | 8163485..8163627 | 845..987 | 100 | <- | Minus |
2R | 8163687..8163905 | 626..844 | 100 | <- | Minus |
2R | 8163969..8164439 | 155..625 | 100 | <- | Minus |
2R | 8164521..8164674 | 1..154 | 100 | Minus |
Translation from 151 to 1308
> GH16429.pep MSYDDDDYPADTFPKDFGYRAYNQDGLELEPNATGSSETKPRILLMGMRR SGKSSIQKVVFHKMSPNETLFLESTSKIVKDDINNSSFVQFQIWDFPGQI DFFEPTFDSDMIFGGCGALVFVIDAKDDYNEALTKFKNTVLQAYKVNKRI KFEVFIHKVDGISDDSKMESQRDIHQRSSDDLNEAGLDQIHLSFHLTSIY DHSIFEAFSKVVQKLIPQLPTLENLLNIFIPNSGIEKAFLFDVVSKIYIA TDSSPVDMQTYELCCDMIDVVIDLSSIYSSEETAFDSGSSSLIKLNNNTI LYLREVNKFLALVCILREENFNRQGVIDYNFICFRDAISEVFELRLKRQK QLENNDQDDDDLVDEQTLIRHGHDAGGISRAQPIN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11205-PA | 387 | GF11205-PA | 1..387 | 1..385 | 1879 | 93.3 | Plus |
Dana\GF17274-PA | 311 | GF17274-PA | 2..210 | 40..250 | 168 | 25.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10668-PA | 385 | GG10668-PA | 1..385 | 1..385 | 2021 | 99.2 | Plus |
Dere\GG17406-PA | 311 | GG17406-PA | 2..189 | 40..229 | 155 | 26.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19979-PA | 389 | GH19979-PA | 1..385 | 1..381 | 1836 | 89.9 | Plus |
Dgri\GH18582-PA | 311 | GH18582-PA | 2..210 | 40..250 | 178 | 26.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RagC-D-PA | 385 | CG8707-PA | 1..385 | 1..385 | 1990 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20265-PA | 393 | GI20265-PA | 8..392 | 2..381 | 1719 | 87.5 | Plus |
Dmoj\GI24512-PA | 311 | GI24512-PA | 2..210 | 40..250 | 170 | 27.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17373-PA | 349 | GL17373-PA | 1..349 | 29..379 | 1736 | 93.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21270-PA | 349 | GA21270-PA | 1..349 | 29..379 | 1730 | 93.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20713-PA | 412 | GM20713-PA | 29..412 | 2..385 | 2030 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10180-PA | 412 | GD10180-PA | 29..412 | 2..385 | 2030 | 100 | Plus |
Dsim\GD15291-PA | 242 | GD15291-PA | 79..242 | 221..385 | 812 | 96.4 | Plus |
Dsim\GD15291-PA | 242 | GD15291-PA | 29..165 | 2..148 | 283 | 45.6 | Plus |
Dsim\GD20832-PA | 311 | GD20832-PA | 2..189 | 40..229 | 156 | 26.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20218-PA | 389 | GJ20218-PA | 1..388 | 1..384 | 1770 | 89.7 | Plus |
Dvir\GJ22685-PA | 311 | GJ22685-PA | 2..210 | 40..250 | 177 | 27 | Plus |
Translation from 151 to 1308
> GH16429.hyp MSYDDDDYPADTFPKDFGYRAYNQDGLELEPNATGSSETKPRILLMGMRR SGKSSIQKVVFHKMSPNETLFLESTSKIVKDDINNSSFVQFQIWDFPGQI DFFEPTFDSDMIFGGCGALVFVIDAKDDYNEALTKFKNTVLQAYKVNKRI KFEVFIHKVDGISDDSKMESQRDIHQRSSDDLNEAGLDQIHLSFHLTSIY DHSIFEAFSKVVQKLIPQLPTLENLLNIFIPNSGIEKAFLFDVVSKIYIA TDSSPVDMQTYELCCDMIDVVIDLSSIYSSEETAFDSGSSSLIKLNNNTI LYLREVNKFLALVCILREENFNRQGVIDYNFICFRDAISEVFELRLKRQK QLENNDQDDDDLVDEQTLIRHGHDAGGISRAQPIN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RagC-D-PA | 385 | CG8707-PA | 1..385 | 1..385 | 1990 | 100 | Plus |