Clone GH16433 Report

Search the DGRC for GH16433

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:164
Well:33
Vector:pOT2
Associated Gene/TranscriptGlcAT-S-RB
Protein status:GH16433.pep: gold
Preliminary Size:2325
Sequenced Size:2406

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG3881 2001-01-01 Release 2 assignment
CG3881 2001-09-19 Blastp of sequenced clone
CG3881 2003-01-01 Sim4 clustering to Release 3
GlcAT-S 2008-04-29 Release 5.5 accounting
GlcAT-S 2008-08-15 Release 5.9 accounting
GlcAT-S 2008-12-18 5.12 accounting

Clone Sequence Records

GH16433.complete Sequence

2406 bp (2406 high quality bases) assembled on 2001-09-19

GenBank Submission: AY058399

> GH16433.complete
TGACAACAACACGTCGGGAAATTGCATCGCTGTGGAAAACAATAAAATAG
AGCGTGAGAGTGAGAGACAGTCGCGCGGGTGTCGGTCAGAAATAAGCAAT
ATTTTCTGTGATTTTTGAGTGTGACGTCCTGTTTTGAGTGCTTCCGCCTC
GTAATTCGCGGCATTGCTGCGGCCAAAAGTTCGCCATTGGATGGTTTTTT
ATAGCAACCAGCGCGCACGGAAATAAATCGGAGCACGGGGAGCACCCAAA
GTGCAGAGATGTCGAGGCAATTTGCATAATTTTCGGGTGGTCGGTCGCAG
CTAGAAAGTTGTATAATAAGATTGCGAAAACCAGGAGGTACGCCCGGCTC
ACCACAAATGGACGGGGAATGTTGTGGCAGCTCCACCGCGTCCACCAACA
CCACAACCATCGCCACCACCACCACCCCAGCTGAAAGCGCCTACACCATC
GTATCCCAAAATATTTCAATAAATGTCTAGTGCCAGGCTACTCGAGTCGC
AGACATCCGACGAGGATAACGAGGACATCGAGCGGCGGCCTCACCAGAGC
CATTCACGCAGCTGCAGCAACAACACCACCCCCACCCATCCACCACATCC
CATGGTCAGGAAGGGGGGTGTGGCCAGGAGGATCTGCCTGATAGGTGGGG
CACTGTTCCTGCTCCTCGTCGCCCTCTGCTACCTCACCCTCAGCGGGGAC
ACTCGCCTCGGTGGCTCCGAGGATTCGGAGGAGGGATCTCACCATGGATT
AGATAGTATGAATTTCCGGCCATTGAACGAAACCGTTCACATATGCAGCG
AGAGTTACGAGGATCGACGGCAGTTCATGCAGGATAAGCCCCAATCTGAT
TACGTCCAGTTGCCCGTGATATACTTTGTTACTCCAACGTATCCGCGGCG
CGAGCAAATCCCAGAACTAACCCGTCTGGCGCACACGCTGCTCCATATTC
CACGATTGCACTGGCTGGTGGCCGATGATCAAGAGAAATGCAATGACTAT
ATGGACACGCTGCTCTATCGATTTGGTATGCCCTTTACCCACATGGTCAG
CCCGATGCCCAGCAAATTCCGGAATGAAAAGCCAGCGCCGCGAGGTGTGG
CAAATCGGAGGGCAGCCTTGCAGTGGATACGGCAGCATAATCTCACCAAC
GGAATACTTTACTTCGGAGACGACGACAACACCTATGATCTGCGTTTGTT
CTCTGAAATCCGGAAAACGCAACGGGTTTCCATGTTTCCTGTAGGTCTTA
TTGCTGATTATGGGGTCAGCGGGCCAGTTGTGCGCAAAGGCAAGGTTGTA
GCATTCCTGGACTCCTGGGTTGCCGGTCGACGCTGGCCCGTTGACATGGC
CGGTTTTGCAGTGAATTTGGAGTACATGGCGCAGTATCCCTATGTGAATA
TGCCGTACAAGCCCGGCTACGAAGAAGATCTCTTTCTGCGCAGCATTGGC
CTTCAAATGAATCTGATTGAGCCGCGCGGCAATAACTGCACCGAAATTCT
GGTTTGGCACACGCAGACAAAGTCAAAGAAGCTCGGAATGGTTCGATTAG
AAAGCAAATACTTGGACGATCGTTCTAACTTGGGCGCTCTGCTTCATAAT
CTTAAACTAATGGGCGTGACCAGTACAACGGAAAGTGAAGGACGCAATGC
ACTGATCAGCAAAAATGGAAGGGAAAATCCACACTCCAAAATTCTTAGCT
GAGTCCTATGGTCCAACCCGAATAATACTTATAGACTTTTAGAGCTAAAT
GTATAGTTATTCTAAAACAAATCTCGAATCCACTGCTCGCTGTATTTCCA
TGGAATTTTCCTGTTCTAGTTATCAGTCGTTTTCGTACTGCACAATTATA
TTTTTTTTTTTCACAAATTATTGCGTGGGTGCTGCCTCTCTGTTCTAGAT
TCTCATAATGAAAAGTTAATAAATTATGCATGTATTGTTAATTAGTTGTA
GATAAGTTTGTTCGTGATAGCAATATAGGAAACACAGGGACGGCTACAAA
GATAGGTCTTATTTATTTATATCATAATCGCTGACAGTAGGTTGTAAAAG
CAGCTAGGAATGTTTATAACTTGCTTATTGTACGTTCTAATTTGCTAAGC
AAAACGAAGGCTTCGGTCTGTATGGTCTTTCGACCAAGCCCTTAGGGATC
ATTTTATCGTTGTTAATCACCTCATCGACTTGCAACACATATCATTAAGC
TTGGTATAAATTATTTAGGCATATAAAAAGTCATCGAATTCCCTTAAGAG
CAATGGTCATTAAGTATGAAGGACTTGTGTCATTTTTAATGTAAACTTTA
TGTATACTCTGTAAATCAGTCAATAAGATAGTGAGTCATAATGTAAAAGA
ATTAAACGCTAGTTTTATGAAGCTTTCCCAAATGGAAAAAAAAAAAAAAA
AAAAAA

GH16433.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:22:27
Subject Length Description Subject Range Query Range Score Percent Strand
GlcAT-S-RB 2523 GlcAT-S-RB 137..2522 1..2387 11895 99.9 Plus
GlcAT-S.a 2638 GlcAT-S.a 1004..2637 753..2387 8135 99.9 Plus
GlcAT-S-RC 2292 GlcAT-S-RC 1004..2292 753..2042 6410 99.9 Plus
GlcAT-S.a 2638 GlcAT-S.a 21..772 1..752 3760 100 Plus
GlcAT-S-RC 2292 GlcAT-S-RC 21..772 1..752 3760 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 10:04:00
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 9615664..9616415 1..752 3760 100 Plus
chr2L 23010047 chr2L 9621172..9621917 1639..2385 3685 99.9 Plus
chr2L 23010047 chr2L 9620765..9621117 1289..1641 1720 99.2 Plus
chr2L 23010047 chr2L 9619951..9620228 751..1028 1390 100 Plus
chr2L 23010047 chr2L 9620286..9620550 1025..1289 1310 99.6 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:55:30 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 10:03:57
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9616858..9617609 1..752 3760 100 Plus
2L 23513712 2L 9622363..9623111 1638..2387 3700 99.9 Plus
2L 23513712 2L 9621957..9622309 1289..1641 1765 100 Plus
2L 23513712 2L 9621143..9621420 751..1028 1390 100 Plus
2L 23513712 2L 9621478..9621742 1025..1289 1325 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:45:15
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9616858..9617609 1..752 3760 100 Plus
2L 23513712 2L 9622363..9623111 1638..2387 3710 99.8 Plus
2L 23513712 2L 9621957..9622309 1289..1641 1765 100 Plus
2L 23513712 2L 9621143..9621420 751..1028 1390 100 Plus
2L 23513712 2L 9621478..9621742 1025..1289 1325 100 Plus
Blast to na_te.dros performed on 2019-03-16 10:03:58 has no hits.

GH16433.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 10:04:57 Download gff for GH16433.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 9615664..9616415 1..752 95 -> Plus
chr2L 9619953..9620225 753..1025 100 -> Plus
chr2L 9620287..9620549 1026..1288 99 -> Plus
chr2L 9620765..9621116 1289..1640 99 -> Plus
chr2L 9621174..9621917 1641..2385 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:45:48 Download gff for GH16433.complete
Subject Subject Range Query Range Percent Splice Strand
GlcAT-S-RB 1..1230 473..1702 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:06:50 Download gff for GH16433.complete
Subject Subject Range Query Range Percent Splice Strand
GlcAT-S-RB 1..1230 473..1702 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 09:55:09 Download gff for GH16433.complete
Subject Subject Range Query Range Percent Splice Strand
GlcAT-S-RB 1..1230 473..1702 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:37:37 Download gff for GH16433.complete
Subject Subject Range Query Range Percent Splice Strand
GlcAT-S-RB 1..1230 473..1702 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 09:53:39 Download gff for GH16433.complete
Subject Subject Range Query Range Percent Splice Strand
GlcAT-S-RB 1..1230 473..1702 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:56:45 Download gff for GH16433.complete
Subject Subject Range Query Range Percent Splice Strand
GlcAT-S-RB 1..2384 1..2385 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:06:50 Download gff for GH16433.complete
Subject Subject Range Query Range Percent Splice Strand
GlcAT-S-RB 21..2404 1..2385 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:55:09 Download gff for GH16433.complete
Subject Subject Range Query Range Percent Splice Strand
GlcAT-S-RB 23..2406 1..2385 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:37:37 Download gff for GH16433.complete
Subject Subject Range Query Range Percent Splice Strand
GlcAT-S-RB 1..2384 1..2385 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:53:39 Download gff for GH16433.complete
Subject Subject Range Query Range Percent Splice Strand
GlcAT-S-RB 23..2406 1..2385 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:04:57 Download gff for GH16433.complete
Subject Subject Range Query Range Percent Splice Strand
2L 9621957..9622308 1289..1640 100 -> Plus
2L 9616858..9617609 1..752 100 -> Plus
2L 9621145..9621417 753..1025 100 -> Plus
2L 9621479..9621741 1026..1288 100 -> Plus
2L 9622366..9623109 1641..2385 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:04:57 Download gff for GH16433.complete
Subject Subject Range Query Range Percent Splice Strand
2L 9621957..9622308 1289..1640 100 -> Plus
2L 9616858..9617609 1..752 100 -> Plus
2L 9621145..9621417 753..1025 100 -> Plus
2L 9621479..9621741 1026..1288 100 -> Plus
2L 9622366..9623109 1641..2385 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:04:57 Download gff for GH16433.complete
Subject Subject Range Query Range Percent Splice Strand
2L 9621957..9622308 1289..1640 100 -> Plus
2L 9616858..9617609 1..752 100 -> Plus
2L 9621145..9621417 753..1025 100 -> Plus
2L 9621479..9621741 1026..1288 100 -> Plus
2L 9622366..9623109 1641..2385 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:55:09 Download gff for GH16433.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 9616858..9617609 1..752 100 -> Plus
arm_2L 9621145..9621417 753..1025 100 -> Plus
arm_2L 9621479..9621741 1026..1288 100 -> Plus
arm_2L 9621957..9622308 1289..1640 100 -> Plus
arm_2L 9622366..9623109 1641..2385 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:14:49 Download gff for GH16433.complete
Subject Subject Range Query Range Percent Splice Strand
2L 9616858..9617609 1..752 100 -> Plus
2L 9621145..9621417 753..1025 100 -> Plus
2L 9621479..9621741 1026..1288 100 -> Plus
2L 9621957..9622308 1289..1640 100 -> Plus
2L 9622366..9623109 1641..2385 99   Plus

GH16433.hyp Sequence

Translation from 472 to 1701

> GH16433.hyp
MSSARLLESQTSDEDNEDIERRPHQSHSRSCSNNTTPTHPPHPMVRKGGV
ARRICLIGGALFLLLVALCYLTLSGDTRLGGSEDSEEGSHHGLDSMNFRP
LNETVHICSESYEDRRQFMQDKPQSDYVQLPVIYFVTPTYPRREQIPELT
RLAHTLLHIPRLHWLVADDQEKCNDYMDTLLYRFGMPFTHMVSPMPSKFR
NEKPAPRGVANRRAALQWIRQHNLTNGILYFGDDDNTYDLRLFSEIRKTQ
RVSMFPVGLIADYGVSGPVVRKGKVVAFLDSWVAGRRWPVDMAGFAVNLE
YMAQYPYVNMPYKPGYEEDLFLRSIGLQMNLIEPRGNNCTEILVWHTQTK
SKKLGMVRLESKYLDDRSNLGALLHNLKLMGVTSTTESEGRNALISKNGR
ENPHSKILS*

GH16433.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 08:08:17
Subject Length Description Subject Range Query Range Score Percent Strand
GlcAT-S-PB 409 CG3881-PB 1..409 1..409 2176 100 Plus
GlcAT-S-PA 327 CG3881-PA 12..327 94..409 1685 100 Plus
GlcAT-S-PC 486 CG3881-PC 170..486 93..409 1680 99.4 Plus
GlcAT-P-PE 316 CG6207-PE 68..301 131..363 607 47.7 Plus
GlcAT-P-PB 316 CG6207-PB 68..301 131..363 607 47.7 Plus
GlcAT-S-PC 486 CG3881-PC 1..93 1..93 491 100 Plus

GH16433.pep Sequence

Translation from 472 to 1701

> GH16433.pep
MSSARLLESQTSDEDNEDIERRPHQSHSRSCSNNTTPTHPPHPMVRKGGV
ARRICLIGGALFLLLVALCYLTLSGDTRLGGSEDSEEGSHHGLDSMNFRP
LNETVHICSESYEDRRQFMQDKPQSDYVQLPVIYFVTPTYPRREQIPELT
RLAHTLLHIPRLHWLVADDQEKCNDYMDTLLYRFGMPFTHMVSPMPSKFR
NEKPAPRGVANRRAALQWIRQHNLTNGILYFGDDDNTYDLRLFSEIRKTQ
RVSMFPVGLIADYGVSGPVVRKGKVVAFLDSWVAGRRWPVDMAGFAVNLE
YMAQYPYVNMPYKPGYEEDLFLRSIGLQMNLIEPRGNNCTEILVWHTQTK
SKKLGMVRLESKYLDDRSNLGALLHNLKLMGVTSTTESEGRNALISKNGR
ENPHSKILS*

GH16433.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 11:57:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF22782-PA 469 GF22782-PA 149..469 89..409 1524 85 Plus
Dana\GF24562-PA 495 GF24562-PA 245..482 129..365 634 48.5 Plus
Dana\GF20780-PA 308 GF20780-PA 37..289 114..354 386 35.9 Plus
Dana\GF22782-PA 469 GF22782-PA 1..99 1..103 191 49.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 11:57:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10044-PA 421 GG10044-PA 1..421 1..409 1902 88.4 Plus
Dere\GG13931-PA 481 GG13931-PA 233..458 131..355 629 49.8 Plus
Dere\GG18695-PA 306 GG18695-PA 40..288 124..355 410 36.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 11:57:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10677-PA 435 GH10677-PA 80..435 61..409 1353 70.5 Plus
Dgri\GH16660-PA 472 GH16660-PA 212..444 122..350 612 48.7 Plus
Dgri\GH24148-PA 307 GH24148-PA 40..288 117..354 399 36.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:51:31
Subject Length Description Subject Range Query Range Score Percent Strand
GlcAT-S-PB 409 CG3881-PB 1..409 1..409 2176 100 Plus
GlcAT-S-PA 327 CG3881-PA 12..327 94..409 1685 100 Plus
GlcAT-S-PC 486 CG3881-PC 170..486 93..409 1680 99.4 Plus
GlcAT-P-PE 316 CG6207-PE 68..301 131..363 607 47.7 Plus
GlcAT-P-PB 316 CG6207-PB 68..301 131..363 607 47.7 Plus
GlcAT-P-PC 316 CG6207-PC 68..301 131..363 607 47.7 Plus
GlcAT-P-PD 479 CG6207-PD 231..464 131..363 607 47.7 Plus
GlcAT-P-PA 479 CG6207-PA 231..464 131..363 607 47.7 Plus
GlcAT-S-PC 486 CG3881-PC 1..93 1..93 491 100 Plus
GlcAT-I-PA 306 CG32775-PA 40..287 124..354 398 36.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 11:57:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11095-PA 440 GI11095-PA 32..440 15..409 1360 63.8 Plus
Dmoj\GI11619-PA 462 GI11619-PA 214..434 131..350 613 50 Plus
Dmoj\GI16402-PA 307 GI16402-PA 40..289 117..355 403 36 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 11:57:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL18922-PA 156 GL18922-PA 1..156 254..409 677 78.2 Plus
Dper\GL22838-PA 471 GL22838-PA 223..443 131..350 628 50.9 Plus
Dper\GL14437-PA 113 GL14437-PA 11..94 272..354 155 36.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 11:57:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA17748-PA 439 GA17748-PA 56..439 40..409 1424 69.8 Plus
Dpse\GA19440-PA 475 GA19440-PA 227..447 131..350 628 50.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 11:57:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17591-PA 417 GM17591-PA 1..417 1..409 2064 93.3 Plus
Dsec\GM24766-PA 477 GM24766-PA 229..449 131..350 625 50 Plus
Dsec\GM12329-PA 133 GM12329-PA 8..115 251..355 177 34.9 Plus
Dsec\GM12328-PA 130 GM12328-PA 40..105 124..186 146 45.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 11:57:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD23619-PA 314 GD23619-PA 1..314 96..409 1681 98.4 Plus
Dsim\GD12815-PA 477 GD12815-PA 229..449 131..350 624 50 Plus
Dsim\GD16673-PA 306 GD16673-PA 40..288 124..355 400 36.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 11:57:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18316-PA 438 GJ18316-PA 9..438 7..409 1369 61.7 Plus
Dvir\GJ11297-PA 430 GJ11297-PA 173..415 122..363 630 47.5 Plus
Dvir\GJ17023-PA 307 GJ17023-PA 40..288 117..354 408 37.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 11:57:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK23869-PA 428 GK23869-PA 10..428 7..409 1453 67.5 Plus
Dwil\GK20549-PA 487 GK20549-PA 239..459 131..350 604 49.5 Plus
Dwil\GK20550-PA 289 GK20550-PA 42..281 131..373 554 44.3 Plus
Dwil\GK15595-PA 308 GK15595-PA 51..289 130..354 392 37.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 11:57:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GlcAT-S-PA 421 GE18858-PA 1..421 1..409 1966 88.2 Plus
Dyak\GlcAT-P-PA 486 GE20229-PA 238..471 131..363 627 48.1 Plus
Dyak\GlcAT-I-PA 306 GE16334-PA 40..288 124..355 406 36.8 Plus