Clone GH16531 Report

Search the DGRC for GH16531

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:165
Well:31
Vector:pOT2
Associated Gene/TranscriptCG31451-RB
Protein status:GH16531.pep: wuzgold
Preliminary Size:1160
Sequenced Size:1026

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG31451 2002-05-15 Blastp of sequenced clone
CG31451 2003-01-01 Sim4 clustering to Release 3
CG31451 2008-04-29 Release 5.5 accounting
CG31451 2008-08-15 Release 5.9 accounting
CG31451 2008-12-18 5.12 accounting

Clone Sequence Records

GH16531.complete Sequence

1026 bp (1026 high quality bases) assembled on 2002-05-15

GenBank Submission: AY119528

> GH16531.complete
AAGGGTCGAGTGCGGATCCCTTGCCCCAGCGGCTATTCGCCTGCGCACTC
GGTCCATCCCTGGCTCACTACACGAAGCGACGGCGTGGCCCAGTTGGGTG
CGGGAATAGCCGGATCCGGCCTTAACAACCGGAAAAACCATTGAGCGCGG
GACGCACTCGGCTGTAGGTACGCCGCCCAAACAAGGTCACACCGAGAGAC
ACACGTCCACGAACAGACCAGAGTTCTTCCCGCAATCCATCAGACACGCA
CTGCCATGGAAAGGTCACGGAAATCGCATGGCAGTGTTCACCAAAATCCA
AATCCAAGCCCAATCCGTCCCTAGTCCCGCCCCTTGCGAATCCGCTTGCG
GATTTGTGGGGGTGGGGTGTGGGGCGGCTGGGTGGGAGTTTGATCATAAC
ACAAACACGAAACCAAACCAAACACCACCACCCTTTGCGTTCGGCAAATC
ACCTCCGGCTGCGATTAAGGGGCTCAGTGCCAGGGGTTAATCGGAGCACA
CTCGACCGATTTCCGTGACATACGTCTCTAGCCAAATGCGGCAGAGATCG
GAGGGCGCGCCCGACGCCACCAGTCGTGGGCTATGCAATGGATTGAACGA
AACATGCGCCAGAGCCAATTTTTATATTTGACCATTAAGAAAAACCTATG
ATTTTGCTTTACGATTCGACCCACTATCATCCCAGATTGCGTAGCCTCCG
GCGTCCTTGGCGACGCGACGTCGTCGTCCGGACCATCCTCCAGCACGCCT
TCCAAAATTGGCGTTCACTGGATCGATTAGCCCCCAGCAAATTGAATCGC
AGCCCGCAGGAGATTTGGTTATTATCGCCTCATTTCGTACAAAGAGAAAC
CGCAACAAGGAAACACTGCACATCGTTTTTTACACCCTTGCGTTATGTTT
TTTGAATGTATTTAAAAACAAAAACAAAATGAAAAACCAAAACCAAATAA
TGAAAAACAAAATATGAAAACACACAAAACACTGAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAA

GH16531.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:08:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG31140.c 7266 CG31140.c 5611..6611 1..1001 4975 99.8 Plus
CG31140.b 8792 CG31140.b 7137..8137 1..1001 4975 99.8 Plus
CG31140.d 5715 CG31140.d 5611..5715 1..105 525 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 17:45:13
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 19806874..19807857 1..984 4785 99.1 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:55:38 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 17:45:11
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 23983503..23984503 1..1001 4975 99.8 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:39:13
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 23724334..23725334 1..1001 4975 99.8 Plus
Blast to na_te.dros performed on 2019-03-15 17:45:11 has no hits.

GH16531.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 17:46:12 Download gff for GH16531.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 19806874..19807784 1..911 99 <- Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:45:55 Download gff for GH16531.complete
Subject Subject Range Query Range Percent Splice Strand
CG31451-RA 1..258 648..905 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:51:38 Download gff for GH16531.complete
Subject Subject Range Query Range Percent Splice Strand
CG31451-RB 1..258 648..905 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:44:12 Download gff for GH16531.complete
Subject Subject Range Query Range Percent Splice Strand
CG31451-RA 1..258 648..905 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 21:29:32 Download gff for GH16531.complete
Subject Subject Range Query Range Percent Splice Strand
CG31451-RA 158..1141 1..984 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:51:37 Download gff for GH16531.complete
Subject Subject Range Query Range Percent Splice Strand
CG31451-RB 158..1141 1..984 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:44:12 Download gff for GH16531.complete
Subject Subject Range Query Range Percent Splice Strand
CG31451-RA 158..1141 1..984 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:46:12 Download gff for GH16531.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23983503..23984486 1..984 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:46:12 Download gff for GH16531.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23983503..23984486 1..984 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:46:12 Download gff for GH16531.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23983503..23984486 1..984 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:45:21 Download gff for GH16531.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 19809225..19810208 1..984 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:45:21 Download gff for GH16531.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 19809225..19810208 1..984 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:45:21 Download gff for GH16531.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 19809225..19810208 1..984 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:16:35 Download gff for GH16531.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23724334..23725317 1..984 100   Plus

GH16531.hyp Sequence

Translation from 647 to 904

> GH16531.hyp
MILLYDSTHYHPRLRSLRRPWRRDVVVRTILQHAFQNWRSLDRLAPSKLN
RSPQEIWLLSPHFVQRETATRKHCTSFFTPLRYVF*
Sequence GH16531.hyp has no blast hits.

GH16531.pep Sequence

Translation from 647 to 904

> GH16531.pep
MILLYDSTHYHPRLRSLRRPWRRDVVVRTILQHAFQNWRSLDRLAPSKLN
RSPQEIWLLSPHFVQRETATRKHCTSFFTPLRYVF*

GH16531.pep Blast Records

Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 23:46:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM26544-PA 85 GM26544-PA 1..85 1..85 363 94.1 Plus