BDGP Sequence Production Resources |
Search the DGRC for GH16625
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 166 |
Well: | 25 |
Vector: | pOT2 |
Associated Gene/Transcript | 312-RA |
Protein status: | GH16625.pep: gold |
Preliminary Size: | 1645 |
Sequenced Size: | 1603 |
Gene | Date | Evidence |
---|---|---|
CG9166 | 2001-01-01 | Release 2 assignment |
CG9166 | 2001-07-04 | Blastp of sequenced clone |
CG9166 | 2003-01-01 | Sim4 clustering to Release 3 |
312 | 2008-04-29 | Release 5.5 accounting |
312 | 2008-08-15 | Release 5.9 accounting |
312 | 2008-12-18 | 5.12 accounting |
1603 bp (1603 high quality bases) assembled on 2001-07-04
GenBank Submission: AY060311
> GH16625.complete AATTTATTAATAACAACAGAAAGAAGCCAAAGCAAAATGCTGACCCGCGT GTTCCGCCTAGTGCACGACAGGCGCCTGAGTGTGCCTGTCCTGCGTTGCT TCCACCACGAGTTCTCCAAGCCGCCACAACAGGCAGCGAAGGGCCAGGAA ATCGAAGGCAATCCCGAAAAGACTTTGGTTGCCGGCGTGCAAGACAAGTA CAAAATATTCCGCGATGAGGAAGCCACGGAGATTTTTGATGTGGAAGAGG CACGCCACCAGGAGCAGCAACTTCCAGAGCCGGACCTGGAGCTGGATCAC TATTACGGCCTCAATTTAAAGCGAGGTGTTCGCGGAGTGTTCGACGTTGA GGACTTGGTGGAGCTGCTCCGCAAGGAGAATGTGGACGACATATTCGTCT GCTACGTGCCGGAGAACCTGAAGTACGTTGACCACCTGGTGGTTTGCAGT GGTCGCAGTTACCGACACATGCTGTCCACCGCGGAGTTCGTGCGCCGAAT GTTCAAGATCAAGCGGGGCAAGGGTGACATATTGCCGCGCATCGAGGGCG ATAAGAGCCGGGATTGGATGGCCATGGACTTGGGCAACATTGCCCTGCAC ATATTTTCACCGAGTGCTCGCGAGGAATACGATCTGGAGTCGCTGTGGGC CATTGGCTCCGAATTCGACCGCGAAAGCCAAAAACCCACCAATCCCTATG GCGATATTTTCATGGCTCAAACACCCCTTTCTTTCGTAGACAAATCGAAA CTAAAGACGTAAAATAATACATTTCACTATTAATAAAAAAAAACTCTTTA GAGCTGCGTACGTGCGAGATCACTTGCAGTGTGATTTGGAAAAACAATAA GGTATGAATAAATATTTCGTGTCAGACTTGTTATTCTCGTGTCACGGCCA AAATAACTATGCGATCGCCCATCTCTAGTTTCTTACTGGGTGCATTCGCT CAGGCAGCCATCTTTAAAATAACTGTAATTTTTATTAACATCGAGCTCTA ATAGGGCAATAATAGCCATAATCCGTCAGAATATGACAGCAGTATTTCCA AACAGGAGCTAAATTCTTTTGTAGATGGCCAAGCGACGCTAGCGCCACCT ATTTCTGAAAATCTGATAATAACAAGTGCGCACTAAAGTATACTGCAAAA AATGAAAATAACTCTTCTTTTCAGAGAATAAAGGCAGATTCCCTTATATC TATGAAATGTCACAATCAAATTGTTATATATTTGATATGTGATGTATTTT AATTTGTCTTTATCGAATATTGTCGGTATATCTGGTTGTAGCAACGCGTC GGAACATTTTCTCCATTCAACTGGAAGATGCAACAATAGACAGTTAATCC TGTAATTTAGGGTTTTAATAACTTTAAGAAGCCGTACAGTTTGATAGATA ACAAATTGTAATAAAAACGCAAAATAATATATTATGAACCAGAAAGCATT CCAATGATTTTATACTTCACAATCGAATTTCCCATTCATTCAGAGAAAGC CATTAAACTCAAATCTCAATGGCTCGAATATATCCTGCGGCGTTTTTTAA CGACTGTTTGCTCAAAATATAAATACGCCCACTCAAAAAAAAAAAAAAAA AAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 1351376..1352379 | 583..1584 | 4510 | 97.5 | Plus |
chr3L | 24539361 | chr3L | 1350674..1350996 | 1..323 | 1600 | 99.7 | Plus |
chr3L | 24539361 | chr3L | 1351053..1351314 | 323..584 | 1265 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
roo | 9092 | roo DM_ROO 9092bp | 3767..3894 | 1338..1206 | 147 | 65 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 1350674..1350995 | 1..322 | 99 | -> | Plus |
chr3L | 1351053..1351313 | 323..583 | 98 | -> | Plus |
chr3L | 1351377..1352379 | 584..1584 | 97 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
312-RA | 1..726 | 37..762 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
312-RA | 1..726 | 37..762 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
312-RA | 1..726 | 37..762 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
312-RA | 1..726 | 37..762 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
312-RA | 1..726 | 37..762 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
312-RA | 12..1595 | 1..1584 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
312-RA | 12..1595 | 1..1584 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
312-RA | 35..1618 | 1..1584 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
312-RA | 12..1595 | 1..1584 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
312-RA | 35..1618 | 1..1584 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1351150..1351471 | 1..322 | 100 | -> | Plus |
3L | 1351529..1351789 | 323..583 | 100 | -> | Plus |
3L | 1351853..1352853 | 584..1584 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1351150..1351471 | 1..322 | 100 | -> | Plus |
3L | 1351529..1351789 | 323..583 | 100 | -> | Plus |
3L | 1351853..1352853 | 584..1584 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1351150..1351471 | 1..322 | 100 | -> | Plus |
3L | 1351529..1351789 | 323..583 | 100 | -> | Plus |
3L | 1351853..1352853 | 584..1584 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 1351150..1351471 | 1..322 | 100 | -> | Plus |
arm_3L | 1351529..1351789 | 323..583 | 100 | -> | Plus |
arm_3L | 1351853..1352853 | 584..1584 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1351150..1351471 | 1..322 | 100 | -> | Plus |
3L | 1351529..1351789 | 323..583 | 100 | -> | Plus |
3L | 1351853..1352853 | 584..1584 | 100 | Plus |
Translation from 0 to 761
> GH16625.hyp NLLITTERSQSKMLTRVFRLVHDRRLSVPVLRCFHHEFSKPPQQAAKGQE IEGNPEKTLVAGVQDKYKIFRDEEATEIFDVEEARHQEQQLPEPDLELDH YYGLNLKRGVRGVFDVEDLVELLRKENVDDIFVCYVPENLKYVDHLVVCS GRSYRHMLSTAEFVRRMFKIKRGKGDILPRIEGDKSRDWMAMDLGNIALH IFSPSAREEYDLESLWAIGSEFDRESQKPTNPYGDIFMAQTPLSFVDKSK LKT*
Translation from 36 to 761
> GH16625.pep MLTRVFRLVHDRRLSVPVLRCFHHEFSKPPQQAAKGQEIEGNPEKTLVAG VQDKYKIFRDEEATEIFDVEEARHQEQQLPEPDLELDHYYGLNLKRGVRG VFDVEDLVELLRKENVDDIFVCYVPENLKYVDHLVVCSGRSYRHMLSTAE FVRRMFKIKRGKGDILPRIEGDKSRDWMAMDLGNIALHIFSPSAREEYDL ESLWAIGSEFDRESQKPTNPYGDIFMAQTPLSFVDKSKLKT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24458-PA | 242 | GF24458-PA | 2..232 | 1..230 | 1009 | 83.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14786-PA | 241 | GG14786-PA | 1..241 | 1..241 | 1143 | 92.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14903-PA | 230 | GH14903-PA | 4..227 | 3..228 | 923 | 76.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
312-PB | 241 | CG9166-PB | 1..241 | 1..241 | 1267 | 100 | Plus |
312-PA | 241 | CG9166-PA | 1..241 | 1..241 | 1267 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12878-PA | 233 | GI12878-PA | 4..229 | 3..230 | 938 | 77.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20701-PA | 238 | GL20701-PA | 43..221 | 53..230 | 843 | 87.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21588-PA | 245 | GA21588-PA | 2..243 | 1..241 | 1049 | 79.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14405-PA | 241 | GM14405-PA | 1..241 | 1..241 | 1248 | 97.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13614-PA | 223 | GD13614-PA | 1..223 | 1..241 | 1123 | 90.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13019-PA | 235 | GJ13019-PA | 4..231 | 3..230 | 946 | 77.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17581-PA | 236 | GK17581-PA | 5..234 | 4..229 | 933 | 77.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21149-PA | 241 | GE21149-PA | 1..240 | 1..240 | 1154 | 89.6 | Plus |