BDGP Sequence Production Resources |
Search the DGRC for GH16723
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 167 |
Well: | 23 |
Vector: | pOT2 |
Associated Gene/Transcript | l(3)02640-RA |
Protein status: | GH16723.pep: gold |
Preliminary Size: | 3600 |
Sequenced Size: | 3338 |
Gene | Date | Evidence |
---|---|---|
CG13587 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9165 | 2003-01-01 | Sim4 clustering to Release 3 |
l(3)02640 | 2008-04-29 | Release 5.5 accounting |
l(3)02640 | 2008-08-15 | Release 5.9 accounting |
CG4692 | 2008-08-15 | Release 5.9 accounting |
l(3)02640 | 2008-12-18 | 5.12 accounting |
CG4692 | 2008-12-18 | 5.12 accounting |
3338 bp (3338 high quality bases) assembled on 2005-10-06
GenBank Submission: BT023907
> GH16723.complete CCGCGGTCACACTTGTCATTCACTTTTCGCTCTTTGCTCGGTCGTAGTAT CGGCCAGCAGCTAAAAATTTGGAAAGATCGTTCGGGCTGGGATTTTCTGC TGATTAGTACAAAGCCAACGTGACAATAACTCAAAAATGTGTCTTGAATA GTGCGTGCATTTACGTTTTCATTCATCTTTTATCGTTCATCCGGGCTCGG TTTTCTAATCAGCACTCCTCCTTCTTTGGCTGTCAACGTGACCCCGAAAG CTGTCCTTCTCGCACACACTTTCACTTTGCAACAACAACAGGAACAACGA ACAAATAACCCAGCATAAACAATTGTTGTGCAACACTTATTAGCAAAACA TTAGAGCGCCTATAATGTCGGCGCAGGAAAAGGTTATACGCGTTGGATCG CGAAAGAGCGAGCTCGCTCTGATTCAGACCAAACATGTCATCGGCCGCCT GCAGAAGCTATATCCCAAGCAGAAATTCGAGATCCACACCATGTCGACAT TTGGCGATCGTGTGCTGAACGTTTCCCTTCCTAAGATTGGCGAGAAGAGC CTGTTCACCCGCGACCTCGAGGATGCGCTGCGCAACGGTGGCGTTGACTT TGTGGTGCACTCCCTCAAGGATCTGCCTACAGCCCTGCCAACAGGAATGG CCATCGGAGCCGTGCTGGAGCGAGAAGATGCGCGGGACGCCCTCGTTCTG CGGGAGAACTTCAAGGGCCACACGATAGCCTCGCTTCCAAAGGGCAGCGT GATTGGAACCTCATCTCTTCGTCGCACAGCCCAGATTCGCAGGATGTATC CCCATTTGACGGTGTGCGACATCCGTGGAAATCTAAATACTCGACTGGCC AAGCTGGATGCAGCCGATTCCAAGTTCTCCGGCATCATACTCGCTCAGGC CGGCTTGGTGAGAATGGGCTGGATGAGTCGTATTAGCCAGGTGCTGGAGC CGACCGACTTGCTCTATGCTGTTGGCCAAGGAGCCCTGGCCGTGGAGTGT CGGGCTAATGACGACCAAGTGCTGGCAATGCTGCAGAAACTTATGTGCCT GAATACAACGTGCCGCATCCTAGCAGAACGAAGCTTCCTGAAGACTTTGG GAGGGGGTTGCTCCGCCCCCGTGGCTGTTTGGAGCAACTTAAAGGGCGAG CCCTTGAATGGAAACAGCCAGGAGGTGGGACTATCCCTCACCGGTGCAGT TTGGAGCCTGGATGGTGCAATAGAGATACGGAACCATCTGGCATGTGCCT TAAATGAACAAAAATTGGAGGGGGACCAACGGAAACGAGGGGCCCAGGAG GCCACCAGCCAGTTGCAGGAGGAGACCAGCAGCAGCTGCGATTCTCCCCC GGCCACGAAGCGTGCCAGAAATGGCAACGACAGTTCGGGTTCGGACTCGA ATTCCAGCAGTCCGCGCCAGCAAGGCAGCCCTCCAGTGATCTGTGAGGAT GCGGCTGCTTGCGCAGCTCTCTCCGGTTACACTGTGGATCAGCTCTCGGA TCTGGCCAGTCACTGCCCAGTGCTGAGTAACAACAATGCTGTGGGACCTA CCGGAGTTAGTGGTGGTGGCGATGCGGATACCAACAATGTGAACACCACT CCCCGTCAGTGCCCTCTTCGCTTGGTGGGCGGTCAGGAAGTGATGGGCCA GTGCCCAGTGCCGCACAATCAGGCAATGGTTCCTGCCAAATGTCCAGTAG CGCATGCAGACTCTGGGGATTCCTTCAGCGCCAAGAGTGGAAGTGGAGGG GAATCGGCCACCACTGCTCACTGTCCACTACAGATGCCCGTGGGTCAGGA CTTCATGGGCGAATGTCCGTACGTTAACAACGATGTGAAGGTATCCTTTG CCCAAGCTGGAAAGTGTCCAGTGACTGGCGGTGTGGCAGGAGCATCAGCT TCTATTTTGCCCACGCCACCGAGCAGCAGAGCCAGTAATGCCAGCAGCGC TGGCGATGAAGTGGATAATGTTGCAACTTCCTCCAAGTGTCCCTTTGCGG CCATGCATCAGGGCAGCGGTCTTGAGGCGCCGGCTAAGGACAACGGAAAC GCAGCCACAGCCAAGTGCCCGTTCCTGCAGAAAACGGTCCAAATGTTCGA CTACGCCGACGAGGAGCAGCCGACGCCGCAGCACTCGGTGCTCATTGAGG ATGTGGAAAACCTGTTCTGCGGTCTCTACCAGCACGCCTGTCACAGTCGG GGCATCTACGAGAAGGCCAACCAGCTGGGCAAGACGCTGGCGGAGGACCT GATCAAGCGCGGCGCCCTCGACGTGATGAAGGTGGCCCAGGCAGAGATTC ACGGCAAAGTGGCGTCGTCTTGAGCCCGTCATCAATATCATCGTTTACAT TAAGTAGAAAAGTGTAACTAGACAAAATGTTTTTCATTTCCGCCTCGTTG TTGAACTCCCGTGGAGAACTCATGCTTCCCCTGATTTAACATCGGTATTG TATTCAATCCTTCTGCTCTCCCCGGCGAATGCATCGTTAATGGTTGGTTT CCGCGTAAACGTTATTTTAGTTTTGTTTTTGTTTCGGGAATATGACAAAT AAATGTATAAGTGAACTCAAAAAAAAAAAAAAAAAAACTCGAGTTTTTTT TTTTTTTTTTTTCTGAGTCTATGGCAGCATGGATATTCGCAGCCGTTTTA TTCACTTAAGCAGTTTTCAAAACACAAAAGCCAAATAGATATAGTTTAGT GGTGATTGCCCGCCTCTCGCACGCCTTGTGGAAAGTGTAGAATCTGTTGC AGATGCAGGACCACCGGGCAGCGCCGCTTAGTGGTACTTGTAGTTCCTGT GGTGCTTCAACTTGGTGTAGTTAATCAGATAGAAGAACGTCATGCTGGCG ACGGTCAGCTGGAAGAAGGGAGCGATCCCGGCGCGCTTTGGGAACACGTA CTTGTGCTGCCAGCGCCACCAGGCACGGCTCACAGCTCCGGCCACAGCGT TGGGGGTCTTGTTGCGGCGTCCCAGCCAGGCGCCGATCTCGCCCAGCTTG ACCTGGCCGAAGGGCACATCGGCTTTGCCGTAGAAGCGAGCGGGGTCGTA GGGCCCGTGCACCTTGGGGTTGTACTCAGCTGGATAGTCACCGAATGCCA TCGCGCTGGTTTGGTTGAGATATATTCTTACCGACATGAAGATCACCTCT GCACTTGTTCTGCTCTTTGCCGGTGTGGCTTTCGCCCAATCTGCGGATCC GAACACCAACGAAAACAAGAATGTGATCCACATCAATAGTCCCAGCGCCG CAAAGTAAATGAGCTTTTGATAATTGCAGGCACAGAATTCAATAAAACAT TTACTTAATTGTTTGCATGTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
l(3)02640-RA | 2603 | l(3)02640-RA | 1..2569 | 1..2569 | 12830 | 99.9 | Plus |
CG4692-RA | 779 | CG4692-RA | 60..578 | 3130..2612 | 2595 | 100 | Minus |
CG4692-RB | 677 | CG4692-RB | 103..596 | 3105..2612 | 2470 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 1337125..1338939 | 755..2569 | 9000 | 99.7 | Plus |
chr2R | 21145070 | chr2R | 20484959..20485371 | 2612..3024 | 2035 | 99.5 | Plus |
chr3L | 24539361 | chr3L | 1334387..1334798 | 1..412 | 2030 | 99.5 | Plus |
chr4 | 1351717 | chr4 | 997407..997774 | 2981..2609 | 1405 | 93 | Minus |
chr3L | 24539361 | chr3L | 1336794..1337064 | 486..756 | 1355 | 100 | Plus |
chr3R | 27901430 | chr3R | 21653679..21653868 | 3320..3131 | 950 | 100 | Minus |
chr2R | 21145070 | chr2R | 20485489..20485596 | 3023..3130 | 540 | 100 | Plus |
chr3L | 24539361 | chr3L | 1335455..1335529 | 411..485 | 375 | 100 | Plus |
chr4 | 1351717 | chr4 | 997325..997409 | 3105..3021 | 350 | 94.1 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
sphinx-RA | 936 | CR34154-RA | 528..895 | 2981..2609 | 1440 | 93.2 | Minus |
sphinx-RB | 1280 | CR34154-RB | 872..1239 | 2981..2609 | 1440 | 93.2 | Minus |
sphinx-RA | 936 | CR34154-RA | 446..530 | 3105..3021 | 335 | 92.9 | Minus |
sphinx-RB | 1280 | CR34154-RB | 790..874 | 3105..3021 | 335 | 92.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 1337602..1339416 | 755..2569 | 9060 | 99.9 | Plus |
2R | 25286936 | 2R | 24599087..24599499 | 2612..3024 | 2065 | 100 | Plus |
3L | 28110227 | 3L | 1334877..1335288 | 1..412 | 2060 | 100 | Plus |
4 | 1348131 | 4 | 976898..977265 | 2981..2609 | 1420 | 93.3 | Minus |
3L | 28110227 | 3L | 1337271..1337541 | 486..756 | 1355 | 100 | Plus |
3R | 32079331 | 3R | 25830718..25830909 | 3322..3131 | 960 | 100 | Minus |
2R | 25286936 | 2R | 24599617..24599724 | 3023..3130 | 540 | 100 | Plus |
3L | 28110227 | 3L | 1335942..1336016 | 411..485 | 375 | 100 | Plus |
4 | 1348131 | 4 | 976816..976900 | 3105..3021 | 335 | 92.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 1337602..1339416 | 755..2569 | 9060 | 99.9 | Plus |
2R | 25260384 | 2R | 24600286..24600698 | 2612..3024 | 2065 | 100 | Plus |
3L | 28103327 | 3L | 1334877..1335288 | 1..412 | 2060 | 100 | Plus |
4 | 1331231 | 4 | 976898..977265 | 2981..2609 | 1440 | 93.2 | Minus |
3L | 28103327 | 3L | 1337271..1337541 | 486..756 | 1355 | 100 | Plus |
3R | 31820162 | 3R | 25571549..25571740 | 3322..3131 | 960 | 100 | Minus |
2R | 25260384 | 2R | 24600816..24600923 | 3023..3130 | 540 | 100 | Plus |
3L | 28103327 | 3L | 1335942..1336016 | 411..485 | 375 | 100 | Plus |
4 | 1331231 | 4 | 976816..976900 | 3105..3021 | 335 | 92.9 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 1334387..1334798 | 1..412 | 99 | -> | Plus |
chr3L | 1335457..1335529 | 413..485 | 100 | -> | Plus |
chr3L | 1336794..1337063 | 486..755 | 100 | -> | Plus |
chr3L | 1337126..1338939 | 756..2569 | 99 | == | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(3)02640-RA | 1..1959 | 365..2323 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(3)02640-RA | 1..1959 | 365..2323 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(3)02640-RA | 1..1959 | 365..2323 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(3)02640-RA | 1..1959 | 365..2323 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(3)02640-RA | 1..1959 | 365..2323 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(3)02640-RA | 1..2560 | 1..2560 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(3)02640-RA | 1..2560 | 1..2560 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(3)02640-RA | 1..2556 | 13..2568 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(3)02640-RA | 1..2560 | 1..2560 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(3)02640-RA | 1..2556 | 13..2568 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1334877..1335288 | 1..412 | 100 | -> | Plus |
3L | 1335944..1336016 | 413..485 | 100 | -> | Plus |
3L | 1337271..1337540 | 486..755 | 100 | -> | Plus |
3L | 1337603..1339416 | 756..2569 | 99 | == | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1334877..1335288 | 1..412 | 100 | -> | Plus |
3L | 1335944..1336016 | 413..485 | 100 | -> | Plus |
3L | 1337271..1337540 | 486..755 | 100 | -> | Plus |
3L | 1337603..1339416 | 756..2569 | 99 | == | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1334877..1335288 | 1..412 | 100 | -> | Plus |
3L | 1335944..1336016 | 413..485 | 100 | -> | Plus |
3L | 1337271..1337540 | 486..755 | 100 | -> | Plus |
3L | 1337603..1339416 | 756..2569 | 99 | == | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 1334877..1335288 | 1..412 | 100 | -> | Plus |
arm_3L | 1335944..1336016 | 413..485 | 100 | -> | Plus |
arm_3L | 1337271..1337540 | 486..755 | 100 | -> | Plus |
arm_3L | 1337603..1339416 | 756..2569 | 99 | == | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1334877..1335288 | 1..412 | 100 | -> | Plus |
3L | 1335944..1336016 | 413..485 | 100 | -> | Plus |
3L | 1337271..1337540 | 486..755 | 100 | -> | Plus |
3L | 1337603..1339416 | 756..2569 | 99 | == | Plus |
Translation from 364 to 2322
> GH16723.pep MSAQEKVIRVGSRKSELALIQTKHVIGRLQKLYPKQKFEIHTMSTFGDRV LNVSLPKIGEKSLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAIGAV LEREDARDALVLRENFKGHTIASLPKGSVIGTSSLRRTAQIRRMYPHLTV CDIRGNLNTRLAKLDAADSKFSGIILAQAGLVRMGWMSRISQVLEPTDLL YAVGQGALAVECRANDDQVLAMLQKLMCLNTTCRILAERSFLKTLGGGCS APVAVWSNLKGEPLNGNSQEVGLSLTGAVWSLDGAIEIRNHLACALNEQK LEGDQRKRGAQEATSQLQEETSSSCDSPPATKRARNGNDSSGSDSNSSSP RQQGSPPVICEDAAACAALSGYTVDQLSDLASHCPVLSNNNAVGPTGVSG GGDADTNNVNTTPRQCPLRLVGGQEVMGQCPVPHNQAMVPAKCPVAHADS GDSFSAKSGSGGESATTAHCPLQMPVGQDFMGECPYVNNDVKVSFAQAGK CPVTGGVAGASASILPTPPSSRASNASSAGDEVDNVATSSKCPFAAMHQG SGLEAPAKDNGNAATAKCPFLQKTVQMFDYADEEQPTPQHSVLIEDVENL FCGLYQHACHSRGIYEKANQLGKTLAEDLIKRGALDVMKVAQAEIHGKVA SS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24457-PA | 648 | GF24457-PA | 1..648 | 1..652 | 2900 | 87.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14785-PA | 650 | GG14785-PA | 1..650 | 1..652 | 3185 | 94.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15218-PA | 612 | GH15218-PA | 1..535 | 1..493 | 1702 | 66.9 | Plus |
Dgri\GH15218-PA | 612 | GH15218-PA | 412..612 | 442..651 | 644 | 61.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
l(3)02640-PA | 652 | CG9165-PA | 1..652 | 1..652 | 3366 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11928-PA | 632 | GI11928-PA | 1..632 | 1..651 | 2142 | 66.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16182-PA | 630 | GL16182-PA | 1..627 | 1..652 | 2436 | 76.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21587-PA | 630 | GA21587-PA | 1..627 | 1..652 | 2471 | 77.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14404-PA | 651 | GM14404-PA | 1..651 | 1..652 | 3374 | 97.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13613-PA | 651 | GD13613-PA | 1..651 | 1..652 | 3410 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12153-PA | 618 | GJ12153-PA | 1..618 | 1..651 | 1998 | 65 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12668-PA | 629 | GK12668-PA | 1..629 | 1..651 | 2067 | 66 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21148-PA | 653 | GE21148-PA | 1..653 | 1..652 | 3197 | 95.3 | Plus |
Translation from 364 to 2322
> GH16723.hyp MSAQEKVIRVGSRKSELALIQTKHVIGRLQKLYPKQKFEIHTMSTFGDRV LNVSLPKIGEKSLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAIGAV LEREDARDALVLRENFKGHTIASLPKGSVIGTSSLRRTAQIRRMYPHLTV CDIRGNLNTRLAKLDAADSKFSGIILAQAGLVRMGWMSRISQVLEPTDLL YAVGQGALAVECRANDDQVLAMLQKLMCLNTTCRILAERSFLKTLGGGCS APVAVWSNLKGEPLNGNSQEVGLSLTGAVWSLDGAIEIRNHLACALNEQK LEGDQRKRGAQEATSQLQEETSSSCDSPPATKRARNGNDSSGSDSNSSSP RQQGSPPVICEDAAACAALSGYTVDQLSDLASHCPVLSNNNAVGPTGVSG GGDADTNNVNTTPRQCPLRLVGGQEVMGQCPVPHNQAMVPAKCPVAHADS GDSFSAKSGSGGESATTAHCPLQMPVGQDFMGECPYVNNDVKVSFAQAGK CPVTGGVAGASASILPTPPSSRASNASSAGDEVDNVATSSKCPFAAMHQG SGLEAPAKDNGNAATAKCPFLQKTVQMFDYADEEQPTPQHSVLIEDVENL FCGLYQHACHSRGIYEKANQLGKTLAEDLIKRGALDVMKVAQAEIHGKVA SS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
l(3)02640-PA | 652 | CG9165-PA | 1..652 | 1..652 | 3366 | 100 | Plus |