BDGP Sequence Production Resources |
Search the DGRC for GH16843
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 168 |
Well: | 43 |
Vector: | pOT2 |
Associated Gene/Transcript | CG32485-RA |
Protein status: | GH16843.pep: gold |
Preliminary Size: | 1328 |
Sequenced Size: | 1208 |
Gene | Date | Evidence |
---|---|---|
CG2159 | 2001-01-01 | Release 2 assignment |
CG32485 | 2003-01-01 | Sim4 clustering to Release 3 |
CG32485 | 2003-02-22 | Blastp of sequenced clone |
CG32485 | 2008-04-29 | Release 5.5 accounting |
CG32485 | 2008-08-15 | Release 5.9 accounting |
CG32485 | 2008-12-18 | 5.12 accounting |
1208 bp (1208 high quality bases) assembled on 2003-02-22
GenBank Submission: BT010100
> GH16843.complete CCGGTCACACTGGTCGAAAAAAAAGAAAAAAACAAATCCGTTCCGTTTGT GAAAAAACATTTCCGAGTAAAAATAAACAGCGCTGCTTGCATTTCACATA GTGTCAGCACATTCCGATTCCAGTCCGCGACTCTCCAGCACGGAATCCCA GTCTGCATTCCGGTCAGGAAGCGATTCGTGCTCTACAATATGTCGTCCGA GGAGCTGGCGCCAATTAACGAGCAGGACTTCAAGGATCTCAAGGAGCGCA TGAAATTGATTGTGGAGGCGGATCCAAAGCAGTATCACAATGACTTTTCG CTGCGTCGCTATCTGCGCGCCTTCAAGACCACAGATGACGCATTTCAGGC CATTCTAAAGACCAACAAGTGGCGTGAGACATACGGCGTGGACAAGCTGT CCGAGATGGACCGCAGCCAGCTGGACAAGAAGGCGCGCCTGCTGCGCCAC CGCGACTGCATCGGCCGTCCGGTGATCTACATTCCGGCCAAAAATCACAG CTCGGAGCGGGACATCGACGAGCTGACGCGCTTCATCGTCTACAATTTGG AGGAGGCGTGCAAGAAGTGCTTCGAGGAGGTCACCGACCGCCTGTGCATT GTCTTCGATCTGGCCGAGTTCAGCACCAGCTGCATGGACTATCAGCTAGT GCAGAATCTCATCTGGCTGCTGGGCAAGCACTTTCCGGAGCGCCTGGGCG TCTGTCTGATCATCAACTCGCCCGGTCTGTTCTCCACCATTTGGCCGGCC ATACGTGTACTGTTGGACGACAATACGGCCAAGAAGGTGAAGTTTGTGGC GGACGAGGCGGAGCTGTGCCAGTACCTCATCCCCGACATCCTGCCAACGG ACATGTAAGGCTTCCGCCACGAAATCAGCATCCGACGAGGCTTCTGCTAG GCGTAGACATATCTCCAAAGAGAACCGAAACCAGTACCTAAGTTTGCAAG GAGGCTTCTGAGAGCTTTTATCCAGTATAGTACTCTATCTGTAAATCGAT GTGTTTAACAAGTTGATTGTAAAGCGTATTCTATTGGACACCACAACTAT TAGTACAATGCTAACTATTTTAGATAAAGGTTTATCTTGTATGTGTAGTA TCTATATACCCGAATTATACTGTATATATGCAAGTGTCTATGTGTACAGC AAATAAAGTTGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32485-RA | 1292 | CG32485-RA | 104..1219 | 1..1116 | 5565 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 3050383..3051153 | 346..1116 | 3735 | 99 | Plus |
chr3L | 24539361 | chr3L | 3049730..3050079 | 1..349 | 1655 | 98.9 | Plus |
chr3L | 24539361 | chr3L | 3051355..3051407 | 1111..1163 | 265 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 3051002..3051772 | 346..1116 | 3840 | 99.8 | Plus |
3L | 28103327 | 3L | 3050350..3050698 | 1..349 | 1745 | 100 | Plus |
3L | 28103327 | 3L | 3051973..3052036 | 1111..1174 | 320 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 3049730..3050078 | 1..348 | 98 | -> | Plus |
chr3L | 3050386..3051146 | 349..1109 | 99 | <- | Plus |
chr3L | 3051350..3051407 | 1110..1163 | 93 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32485-RA | 1..669 | 190..858 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32485-RA | 1..669 | 190..858 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32485-RA | 1..669 | 190..858 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32485-RA | 1..669 | 190..858 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32485-RA | 1..669 | 190..858 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32485-RA | 22..1130 | 1..1109 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32485-RA | 22..1130 | 1..1109 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32485-RA | 28..1136 | 1..1109 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32485-RA | 22..1130 | 1..1109 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32485-RA | 28..1136 | 1..1109 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3050350..3050697 | 1..348 | 100 | -> | Plus |
3L | 3051005..3051765 | 349..1109 | 100 | <- | Plus |
3L | 3051968..3052025 | 1110..1163 | 93 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3050350..3050697 | 1..348 | 100 | -> | Plus |
3L | 3051005..3051765 | 349..1109 | 100 | <- | Plus |
3L | 3051968..3052025 | 1110..1163 | 93 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3050350..3050697 | 1..348 | 100 | -> | Plus |
3L | 3051005..3051765 | 349..1109 | 100 | <- | Plus |
3L | 3051968..3052025 | 1110..1163 | 93 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 3050350..3050697 | 1..348 | 100 | -> | Plus |
arm_3L | 3051005..3051765 | 349..1109 | 100 | <- | Plus |
arm_3L | 3051968..3052025 | 1110..1163 | 93 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3050350..3050697 | 1..348 | 100 | -> | Plus |
3L | 3051005..3051765 | 349..1109 | 100 | <- | Plus |
3L | 3051968..3052025 | 1110..1163 | 93 | Plus |
Translation from 0 to 857
> GH16843.hyp PVTLVEKKEKNKSVPFVKKHFRVKINSAACISHSVSTFRFQSATLQHGIP VCIPVRKRFVLYNMSSEELAPINEQDFKDLKERMKLIVEADPKQYHNDFS LRRYLRAFKTTDDAFQAILKTNKWRETYGVDKLSEMDRSQLDKKARLLRH RDCIGRPVIYIPAKNHSSERDIDELTRFIVYNLEEACKKCFEEVTDRLCI VFDLAEFSTSCMDYQLVQNLIWLLGKHFPERLGVCLIINSPGLFSTIWPA IRVLLDDNTAKKVKFVADEAELCQYLIPDILPTDM*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32485-PA | 222 | CG32485-PA | 1..222 | 64..285 | 1167 | 100 | Plus |
Translation from 189 to 857
> GH16843.pep MSSEELAPINEQDFKDLKERMKLIVEADPKQYHNDFSLRRYLRAFKTTDD AFQAILKTNKWRETYGVDKLSEMDRSQLDKKARLLRHRDCIGRPVIYIPA KNHSSERDIDELTRFIVYNLEEACKKCFEEVTDRLCIVFDLAEFSTSCMD YQLVQNLIWLLGKHFPERLGVCLIINSPGLFSTIWPAIRVLLDDNTAKKV KFVADEAELCQYLIPDILPTDM*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24264-PA | 223 | GF24264-PA | 1..223 | 1..222 | 1103 | 92.4 | Plus |
Dana\GF24005-PA | 662 | GF24005-PA | 48..225 | 38..216 | 162 | 24.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14900-PA | 222 | GG14900-PA | 1..222 | 1..222 | 1159 | 97.3 | Plus |
Dere\GG15302-PA | 497 | GG15302-PA | 8..222 | 9..213 | 162 | 23.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14569-PA | 223 | GH14569-PA | 1..223 | 1..222 | 1090 | 89.2 | Plus |
Dgri\GH14689-PA | 482 | GH14689-PA | 48..228 | 38..219 | 179 | 25.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32485-PA | 222 | CG32485-PA | 1..222 | 1..222 | 1167 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13896-PA | 223 | GI13896-PA | 1..223 | 1..222 | 1057 | 87.4 | Plus |
Dmoj\GI13304-PA | 504 | GI13304-PA | 48..225 | 38..216 | 173 | 24.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20780-PA | 223 | GL20780-PA | 1..223 | 1..222 | 1123 | 94.2 | Plus |
Dper\GL21079-PA | 498 | GL21079-PA | 48..225 | 38..216 | 162 | 23.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA16939-PA | 223 | GA16939-PA | 1..223 | 1..222 | 1123 | 94.2 | Plus |
Dpse\GA28323-PA | 498 | GA28323-PA | 48..225 | 38..216 | 161 | 23.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14526-PA | 222 | GM14526-PA | 1..222 | 1..222 | 1176 | 99.5 | Plus |
Dsec\GM14735-PA | 497 | GM14735-PA | 60..225 | 49..216 | 175 | 24.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13723-PA | 222 | GD13723-PA | 1..222 | 1..222 | 1176 | 99.5 | Plus |
Dsim\GD13914-PA | 236 | GD13914-PA | 4..167 | 51..216 | 179 | 24.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11751-PA | 223 | GJ11751-PA | 1..223 | 1..222 | 1082 | 89.2 | Plus |
Dvir\GJ12072-PA | 487 | GJ12072-PA | 48..225 | 38..216 | 173 | 24.7 | Plus |