Clone GH16914 Report

Search the DGRC for GH16914

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:169
Well:14
Vector:pOT2
Associated Gene/TranscriptFaf-RA
Protein status:GH16914.pep: gold
Preliminary Size:2008
Sequenced Size:1959

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG10372 2001-01-01 Release 2 assignment
CG10372 2001-07-04 Blastp of sequenced clone
CG10372 2003-01-01 Sim4 clustering to Release 3
Faf 2008-04-29 Release 5.5 accounting
Faf 2008-08-15 Release 5.9 accounting
Faf 2008-12-18 5.12 accounting

Clone Sequence Records

GH16914.complete Sequence

1959 bp (1959 high quality bases) assembled on 2001-07-04

GenBank Submission: AY051515

> GH16914.complete
TTTGTTTGCCGCTGGATTTCGCAGTGAGAACGCGTCGGCCTGCGCGGTCA
CACTAGTCATTCACAACCAAATTCATCGGATCATTGGCAGAAAGGCAAGA
AGAAGAGCAAGCAATCACCTGCGAAAAAGAAATAAATTGCCGAGAAATGT
TAAAGACGTTGTAGTGCGGCAATTTGGCGTGCGTTGAAATGACTCCTGGC
GACCAGTAGAAGCATTTAGTGACCACGCTACTCATCCCCCGTCCCCCGCC
GCAGCGGCTGAGCCACTGGACAAAGGCCAGCTTACAACAAAAACAACACC
AGGGAGACAGTCACGGGCCATTGGCACCCACACAAGCACACACACGCACG
CACTGCGTAAAAGCAAACAACAACGATAACAACTGGGAACGGAGGCCTTC
AACTGCAGGAAAGATGGAAGCTGATGGACTGACCAACGAACAGACGGAGA
AGGTCCTCCAGTTCCAGGATCTCACCGGCATCGAGGATATGAACGTCTGC
CGCGACGTCCTAATCAGACACCAATGGGATCTCGAGGTGGCCTTCCAGGA
GCAGCTAAATATCCGCGAGGGGCGTCCGACCATGTTCGCCGCCTCTACAG
ATGTCCGAGCGCCCGCTGTCCTTAACGATCGCTTCCTGCAGCAGGTGTTT
TCCGCCAACATGCCTGGCGGAAGGACGGTTAGCCGGGTGCCCAGTGGCCC
CGTTCCCCGCAGCTTCACCGGCATCATTGGATATGTGATTAACTTCGTGT
TTCAGTACTTCTACTCCACGCTGACGAGCATCGTCAGTGCGTTTGTGAAC
CTGGGCGGAGGAAACGAAGCCCGCTTGGTGACAGATCCACTGGGGGATGT
GATGAAGTTTATTAGGGAATACTACGAAAGGTATCCCGAGCACCCGGTCT
TCTATCAGGGCACATATGCCCAGGCCCTTAACGATGCTAAGCAGGAGCTG
CGTTTTCTAATCGTTTACCTGCACAAGGATCCCGCCAAGAACCCAGATGT
GGAATCCTTCTGCCGCAACACACTGTCGGCGAGATCGGTCATTGACTACA
TTAACACACACACCCTGTTATGGGGATGCGACGTAGCCACGCCGGAGGGC
TACCGGGTGATGCAGTCGATAACGGTGCGCAGCTACCCAACGATGGTGAT
GATCAGCCTTCGAGCAAATCGCATGATGATCGTCGGACGTTTCGAGGGGG
ATTGCACGCCCGAAGAGCTGCTCCGTCGCCTCCAGTCGGTGACGAACGCC
AACGAGGTGTGGCTGAGTCAAGCGCGTGCAGATCGCTTAGAGCGGAATTT
TACACAGACTTTAAGAAGACAGCAGGACGAGGCATACGAGCAGAGTTTGC
TTGCGGACGAGGAGAAGGAGCGTCAGCGGCAAAGGGAGCGGGATGCCGTC
CGGCAGGCGGAGGAGGCTGTGGAACAAGCTCGACGCGATGTCGAGCTTCG
CAAGGAGGAGATTGCCCGGCAAAAGATCGAGCTGGCCACATTGGTGCCAT
CCGAGCCGGCAGCGGATGCTGTCGGCGCCATTGCAGTTGTATTCAAGCTG
CCCAGTGGAACACGCCTAGAGCGCCGATTTAACCAGACGGATTCGGTGCT
TGACGTTTATCACTATCTCTTCTGCCATCCCGATTCGCCGGATGAGTTCG
AGATCACAACGAATTTCCCGAAGCGCGTGCTCTTCTCGAAAGCGAACTTG
GATGCCGCTGGGGAAACAGGCACAGCCAAGGAGACGCTGACCAAAACCCT
TCAGGCCGTAGGACTCAAGAACCGCGAGGTGCTGTTCGTTAACGATCTGG
AAGCGTAACCAAGCACCACCTACCAAATGAAAGCATCATCGTGTTACCAG
CAGCAACGCATTACCAAAACTTGAACCAAGTTTTAAGTAGTCGTAGTCAA
CGTCCAAGTCGGAGGATAAATAGAGAAACTATTCCTAATTTAAAAAAAAA
AAAAAAAAA

GH16914.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:35:33
Subject Length Description Subject Range Query Range Score Percent Strand
FFAF-RA 2422 FFAF-RA 88..2030 1..1943 9715 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 15:44:33
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 18705541..18706608 1602..535 5340 100 Minus
chr2L 23010047 chr2L 18706859..18707396 538..1 2690 100 Minus
chr2L 23010047 chr2L 18705145..18705484 1941..1602 1700 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:56:06 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 15:44:31
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18706796..18707863 1602..535 5340 100 Minus
2L 23513712 2L 18708114..18708651 538..1 2690 100 Minus
2L 23513712 2L 18706398..18706739 1943..1602 1710 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:57:15
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18706796..18707863 1602..535 5340 100 Minus
2L 23513712 2L 18708114..18708651 538..1 2690 100 Minus
2L 23513712 2L 18706398..18706739 1943..1602 1710 100 Minus
Blast to na_te.dros performed on 2019-03-15 15:44:31 has no hits.

GH16914.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 15:45:15 Download gff for GH16914.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 18705145..18705484 1602..1941 100 <- Minus
chr2L 18705542..18706606 537..1601 100 <- Minus
chr2L 18706861..18707396 1..536 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:46:20 Download gff for GH16914.complete
Subject Subject Range Query Range Percent Splice Strand
Faf-RA 1..1395 414..1808 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:25:55 Download gff for GH16914.complete
Subject Subject Range Query Range Percent Splice Strand
Faf-RA 1..1395 414..1808 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 01:38:27 Download gff for GH16914.complete
Subject Subject Range Query Range Percent Splice Strand
Faf-RA 1..1395 414..1808 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:58:58 Download gff for GH16914.complete
Subject Subject Range Query Range Percent Splice Strand
Faf-RA 1..1395 414..1808 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:14:19 Download gff for GH16914.complete
Subject Subject Range Query Range Percent Splice Strand
Faf-RA 1..1395 414..1808 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:24:39 Download gff for GH16914.complete
Subject Subject Range Query Range Percent Splice Strand
Faf-RA 38..1978 1..1941 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:25:55 Download gff for GH16914.complete
Subject Subject Range Query Range Percent Splice Strand
Faf-RA 38..1978 1..1941 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:38:27 Download gff for GH16914.complete
Subject Subject Range Query Range Percent Splice Strand
Faf-RA 38..1978 1..1941 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:58:59 Download gff for GH16914.complete
Subject Subject Range Query Range Percent Splice Strand
Faf-RA 38..1978 1..1941 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:14:19 Download gff for GH16914.complete
Subject Subject Range Query Range Percent Splice Strand
Faf-RA 38..1978 1..1941 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:45:15 Download gff for GH16914.complete
Subject Subject Range Query Range Percent Splice Strand
2L 18706400..18706739 1602..1941 100 <- Minus
2L 18706797..18707861 537..1601 100 <- Minus
2L 18708116..18708651 1..536 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:45:15 Download gff for GH16914.complete
Subject Subject Range Query Range Percent Splice Strand
2L 18706400..18706739 1602..1941 100 <- Minus
2L 18706797..18707861 537..1601 100 <- Minus
2L 18708116..18708651 1..536 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:45:15 Download gff for GH16914.complete
Subject Subject Range Query Range Percent Splice Strand
2L 18706400..18706739 1602..1941 100 <- Minus
2L 18706797..18707861 537..1601 100 <- Minus
2L 18708116..18708651 1..536 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:38:27 Download gff for GH16914.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 18706400..18706739 1602..1941 100 <- Minus
arm_2L 18706797..18707861 537..1601 100 <- Minus
arm_2L 18708116..18708651 1..536 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:36:48 Download gff for GH16914.complete
Subject Subject Range Query Range Percent Splice Strand
2L 18706400..18706739 1602..1941 100 <- Minus
2L 18706797..18707861 537..1601 100 <- Minus
2L 18708116..18708651 1..536 100   Minus

GH16914.pep Sequence

Translation from 413 to 1807

> GH16914.pep
MEADGLTNEQTEKVLQFQDLTGIEDMNVCRDVLIRHQWDLEVAFQEQLNI
REGRPTMFAASTDVRAPAVLNDRFLQQVFSANMPGGRTVSRVPSGPVPRS
FTGIIGYVINFVFQYFYSTLTSIVSAFVNLGGGNEARLVTDPLGDVMKFI
REYYERYPEHPVFYQGTYAQALNDAKQELRFLIVYLHKDPAKNPDVESFC
RNTLSARSVIDYINTHTLLWGCDVATPEGYRVMQSITVRSYPTMVMISLR
ANRMMIVGRFEGDCTPEELLRRLQSVTNANEVWLSQARADRLERNFTQTL
RRQQDEAYEQSLLADEEKERQRQRERDAVRQAEEAVEQARRDVELRKEEI
ARQKIELATLVPSEPAADAVGAIAVVFKLPSGTRLERRFNQTDSVLDVYH
YLFCHPDSPDEFEITTNFPKRVLFSKANLDAAGETGTAKETLTKTLQAVG
LKNREVLFVNDLEA*

GH16914.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 21:54:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14818-PA 462 GF14818-PA 1..462 1..464 2301 91.6 Plus
Dana\GF13573-PA 681 GF13573-PA 356..680 141..461 205 25.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 21:54:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21689-PA 464 GG21689-PA 1..464 1..464 2411 96.6 Plus
Dere\GG22305-PA 695 GG22305-PA 376..670 148..423 180 25.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 21:54:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH11459-PA 464 GH11459-PA 1..464 1..464 2106 83.3 Plus
Dgri\GH19823-PA 548 GH19823-PA 227..522 148..423 195 25.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:50:58
Subject Length Description Subject Range Query Range Score Percent Strand
Faf2-PB 464 CG10372-PB 1..464 1..464 2379 100 Plus
Faf2-PA 464 CG10372-PA 1..464 1..464 2379 100 Plus
casp-PC 690 CG8400-PC 364..665 141..423 194 23.5 Plus
casp-PB 695 CG8400-PB 369..670 141..423 194 23.5 Plus
casp-PA 695 CG8400-PA 369..670 141..423 194 23.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 21:54:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI16862-PA 463 GI16862-PA 1..463 1..464 2084 84.5 Plus
Dmoj\GI20412-PA 683 GI20412-PA 362..659 148..425 216 27.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 21:54:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL14719-PA 360 GL14719-PA 1..359 1..359 1795 91.6 Plus
Dper\GL14730-PA 84 GL14730-PA 1..84 379..464 337 73.3 Plus
Dper\GL17286-PA 704 GL17286-PA 385..679 148..423 176 23 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 21:54:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10282-PA 462 GA10282-PA 1..462 1..464 2220 88.1 Plus
Dpse\GA21048-PA 704 GA21048-PA 385..679 148..423 176 23 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 21:54:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17067-PA 464 GM17067-PA 1..464 1..464 2421 97 Plus
Dsec\GM20096-PA 693 GM20096-PA 367..668 141..423 189 24.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 21:54:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD21813-PA 464 GD21813-PA 1..464 1..464 2443 97.8 Plus
Dsim\GD25573-PA 695 GD25573-PA 369..670 141..423 185 24.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 21:54:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17201-PA 463 GJ17201-PA 1..463 1..464 2173 86 Plus
Dvir\GJ20083-PA 545 GJ20083-PA 224..519 148..423 205 26 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 21:54:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK18177-PA 464 GK18177-PA 1..464 1..464 2074 82.4 Plus
Dwil\GK23123-PA 697 GK23123-PA 377..674 148..425 205 27 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 21:54:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12712-PA 464 GE12712-PA 1..464 1..464 2400 95.5 Plus
Dyak\GE14103-PA 695 GE14103-PA 376..670 148..423 178 25.1 Plus

GH16914.hyp Sequence

Translation from 413 to 1807

> GH16914.hyp
MEADGLTNEQTEKVLQFQDLTGIEDMNVCRDVLIRHQWDLEVAFQEQLNI
REGRPTMFAASTDVRAPAVLNDRFLQQVFSANMPGGRTVSRVPSGPVPRS
FTGIIGYVINFVFQYFYSTLTSIVSAFVNLGGGNEARLVTDPLGDVMKFI
REYYERYPEHPVFYQGTYAQALNDAKQELRFLIVYLHKDPAKNPDVESFC
RNTLSARSVIDYINTHTLLWGCDVATPEGYRVMQSITVRSYPTMVMISLR
ANRMMIVGRFEGDCTPEELLRRLQSVTNANEVWLSQARADRLERNFTQTL
RRQQDEAYEQSLLADEEKERQRQRERDAVRQAEEAVEQARRDVELRKEEI
ARQKIELATLVPSEPAADAVGAIAVVFKLPSGTRLERRFNQTDSVLDVYH
YLFCHPDSPDEFEITTNFPKRVLFSKANLDAAGETGTAKETLTKTLQAVG
LKNREVLFVNDLEA*

GH16914.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 09:45:45
Subject Length Description Subject Range Query Range Score Percent Strand
Faf-PB 464 CG10372-PB 1..464 1..464 2379 100 Plus
Faf-PA 464 CG10372-PA 1..464 1..464 2379 100 Plus
casp-PC 690 CG8400-PC 364..665 141..423 194 23.5 Plus
casp-PB 695 CG8400-PB 369..670 141..423 194 23.5 Plus
casp-PA 695 CG8400-PA 369..670 141..423 194 23.5 Plus