BDGP Sequence Production Resources |
Search the DGRC for GH16914
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 169 |
Well: | 14 |
Vector: | pOT2 |
Associated Gene/Transcript | Faf-RA |
Protein status: | GH16914.pep: gold |
Preliminary Size: | 2008 |
Sequenced Size: | 1959 |
Gene | Date | Evidence |
---|---|---|
CG10372 | 2001-01-01 | Release 2 assignment |
CG10372 | 2001-07-04 | Blastp of sequenced clone |
CG10372 | 2003-01-01 | Sim4 clustering to Release 3 |
Faf | 2008-04-29 | Release 5.5 accounting |
Faf | 2008-08-15 | Release 5.9 accounting |
Faf | 2008-12-18 | 5.12 accounting |
1959 bp (1959 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051515
> GH16914.complete TTTGTTTGCCGCTGGATTTCGCAGTGAGAACGCGTCGGCCTGCGCGGTCA CACTAGTCATTCACAACCAAATTCATCGGATCATTGGCAGAAAGGCAAGA AGAAGAGCAAGCAATCACCTGCGAAAAAGAAATAAATTGCCGAGAAATGT TAAAGACGTTGTAGTGCGGCAATTTGGCGTGCGTTGAAATGACTCCTGGC GACCAGTAGAAGCATTTAGTGACCACGCTACTCATCCCCCGTCCCCCGCC GCAGCGGCTGAGCCACTGGACAAAGGCCAGCTTACAACAAAAACAACACC AGGGAGACAGTCACGGGCCATTGGCACCCACACAAGCACACACACGCACG CACTGCGTAAAAGCAAACAACAACGATAACAACTGGGAACGGAGGCCTTC AACTGCAGGAAAGATGGAAGCTGATGGACTGACCAACGAACAGACGGAGA AGGTCCTCCAGTTCCAGGATCTCACCGGCATCGAGGATATGAACGTCTGC CGCGACGTCCTAATCAGACACCAATGGGATCTCGAGGTGGCCTTCCAGGA GCAGCTAAATATCCGCGAGGGGCGTCCGACCATGTTCGCCGCCTCTACAG ATGTCCGAGCGCCCGCTGTCCTTAACGATCGCTTCCTGCAGCAGGTGTTT TCCGCCAACATGCCTGGCGGAAGGACGGTTAGCCGGGTGCCCAGTGGCCC CGTTCCCCGCAGCTTCACCGGCATCATTGGATATGTGATTAACTTCGTGT TTCAGTACTTCTACTCCACGCTGACGAGCATCGTCAGTGCGTTTGTGAAC CTGGGCGGAGGAAACGAAGCCCGCTTGGTGACAGATCCACTGGGGGATGT GATGAAGTTTATTAGGGAATACTACGAAAGGTATCCCGAGCACCCGGTCT TCTATCAGGGCACATATGCCCAGGCCCTTAACGATGCTAAGCAGGAGCTG CGTTTTCTAATCGTTTACCTGCACAAGGATCCCGCCAAGAACCCAGATGT GGAATCCTTCTGCCGCAACACACTGTCGGCGAGATCGGTCATTGACTACA TTAACACACACACCCTGTTATGGGGATGCGACGTAGCCACGCCGGAGGGC TACCGGGTGATGCAGTCGATAACGGTGCGCAGCTACCCAACGATGGTGAT GATCAGCCTTCGAGCAAATCGCATGATGATCGTCGGACGTTTCGAGGGGG ATTGCACGCCCGAAGAGCTGCTCCGTCGCCTCCAGTCGGTGACGAACGCC AACGAGGTGTGGCTGAGTCAAGCGCGTGCAGATCGCTTAGAGCGGAATTT TACACAGACTTTAAGAAGACAGCAGGACGAGGCATACGAGCAGAGTTTGC TTGCGGACGAGGAGAAGGAGCGTCAGCGGCAAAGGGAGCGGGATGCCGTC CGGCAGGCGGAGGAGGCTGTGGAACAAGCTCGACGCGATGTCGAGCTTCG CAAGGAGGAGATTGCCCGGCAAAAGATCGAGCTGGCCACATTGGTGCCAT CCGAGCCGGCAGCGGATGCTGTCGGCGCCATTGCAGTTGTATTCAAGCTG CCCAGTGGAACACGCCTAGAGCGCCGATTTAACCAGACGGATTCGGTGCT TGACGTTTATCACTATCTCTTCTGCCATCCCGATTCGCCGGATGAGTTCG AGATCACAACGAATTTCCCGAAGCGCGTGCTCTTCTCGAAAGCGAACTTG GATGCCGCTGGGGAAACAGGCACAGCCAAGGAGACGCTGACCAAAACCCT TCAGGCCGTAGGACTCAAGAACCGCGAGGTGCTGTTCGTTAACGATCTGG AAGCGTAACCAAGCACCACCTACCAAATGAAAGCATCATCGTGTTACCAG CAGCAACGCATTACCAAAACTTGAACCAAGTTTTAAGTAGTCGTAGTCAA CGTCCAAGTCGGAGGATAAATAGAGAAACTATTCCTAATTTAAAAAAAAA AAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
FFAF-RA | 2422 | FFAF-RA | 88..2030 | 1..1943 | 9715 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 18705541..18706608 | 1602..535 | 5340 | 100 | Minus |
chr2L | 23010047 | chr2L | 18706859..18707396 | 538..1 | 2690 | 100 | Minus |
chr2L | 23010047 | chr2L | 18705145..18705484 | 1941..1602 | 1700 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 18706796..18707863 | 1602..535 | 5340 | 100 | Minus |
2L | 23513712 | 2L | 18708114..18708651 | 538..1 | 2690 | 100 | Minus |
2L | 23513712 | 2L | 18706398..18706739 | 1943..1602 | 1710 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 18706796..18707863 | 1602..535 | 5340 | 100 | Minus |
2L | 23513712 | 2L | 18708114..18708651 | 538..1 | 2690 | 100 | Minus |
2L | 23513712 | 2L | 18706398..18706739 | 1943..1602 | 1710 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 18705145..18705484 | 1602..1941 | 100 | <- | Minus |
chr2L | 18705542..18706606 | 537..1601 | 100 | <- | Minus |
chr2L | 18706861..18707396 | 1..536 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Faf-RA | 1..1395 | 414..1808 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Faf-RA | 1..1395 | 414..1808 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Faf-RA | 1..1395 | 414..1808 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Faf-RA | 1..1395 | 414..1808 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Faf-RA | 1..1395 | 414..1808 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Faf-RA | 38..1978 | 1..1941 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Faf-RA | 38..1978 | 1..1941 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Faf-RA | 38..1978 | 1..1941 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Faf-RA | 38..1978 | 1..1941 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Faf-RA | 38..1978 | 1..1941 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 18706400..18706739 | 1602..1941 | 100 | <- | Minus |
2L | 18706797..18707861 | 537..1601 | 100 | <- | Minus |
2L | 18708116..18708651 | 1..536 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 18706400..18706739 | 1602..1941 | 100 | <- | Minus |
2L | 18706797..18707861 | 537..1601 | 100 | <- | Minus |
2L | 18708116..18708651 | 1..536 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 18706400..18706739 | 1602..1941 | 100 | <- | Minus |
2L | 18706797..18707861 | 537..1601 | 100 | <- | Minus |
2L | 18708116..18708651 | 1..536 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 18706400..18706739 | 1602..1941 | 100 | <- | Minus |
arm_2L | 18706797..18707861 | 537..1601 | 100 | <- | Minus |
arm_2L | 18708116..18708651 | 1..536 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 18706400..18706739 | 1602..1941 | 100 | <- | Minus |
2L | 18706797..18707861 | 537..1601 | 100 | <- | Minus |
2L | 18708116..18708651 | 1..536 | 100 | Minus |
Translation from 413 to 1807
> GH16914.pep MEADGLTNEQTEKVLQFQDLTGIEDMNVCRDVLIRHQWDLEVAFQEQLNI REGRPTMFAASTDVRAPAVLNDRFLQQVFSANMPGGRTVSRVPSGPVPRS FTGIIGYVINFVFQYFYSTLTSIVSAFVNLGGGNEARLVTDPLGDVMKFI REYYERYPEHPVFYQGTYAQALNDAKQELRFLIVYLHKDPAKNPDVESFC RNTLSARSVIDYINTHTLLWGCDVATPEGYRVMQSITVRSYPTMVMISLR ANRMMIVGRFEGDCTPEELLRRLQSVTNANEVWLSQARADRLERNFTQTL RRQQDEAYEQSLLADEEKERQRQRERDAVRQAEEAVEQARRDVELRKEEI ARQKIELATLVPSEPAADAVGAIAVVFKLPSGTRLERRFNQTDSVLDVYH YLFCHPDSPDEFEITTNFPKRVLFSKANLDAAGETGTAKETLTKTLQAVG LKNREVLFVNDLEA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14818-PA | 462 | GF14818-PA | 1..462 | 1..464 | 2301 | 91.6 | Plus |
Dana\GF13573-PA | 681 | GF13573-PA | 356..680 | 141..461 | 205 | 25.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21689-PA | 464 | GG21689-PA | 1..464 | 1..464 | 2411 | 96.6 | Plus |
Dere\GG22305-PA | 695 | GG22305-PA | 376..670 | 148..423 | 180 | 25.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11459-PA | 464 | GH11459-PA | 1..464 | 1..464 | 2106 | 83.3 | Plus |
Dgri\GH19823-PA | 548 | GH19823-PA | 227..522 | 148..423 | 195 | 25.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Faf2-PB | 464 | CG10372-PB | 1..464 | 1..464 | 2379 | 100 | Plus |
Faf2-PA | 464 | CG10372-PA | 1..464 | 1..464 | 2379 | 100 | Plus |
casp-PC | 690 | CG8400-PC | 364..665 | 141..423 | 194 | 23.5 | Plus |
casp-PB | 695 | CG8400-PB | 369..670 | 141..423 | 194 | 23.5 | Plus |
casp-PA | 695 | CG8400-PA | 369..670 | 141..423 | 194 | 23.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16862-PA | 463 | GI16862-PA | 1..463 | 1..464 | 2084 | 84.5 | Plus |
Dmoj\GI20412-PA | 683 | GI20412-PA | 362..659 | 148..425 | 216 | 27.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14719-PA | 360 | GL14719-PA | 1..359 | 1..359 | 1795 | 91.6 | Plus |
Dper\GL14730-PA | 84 | GL14730-PA | 1..84 | 379..464 | 337 | 73.3 | Plus |
Dper\GL17286-PA | 704 | GL17286-PA | 385..679 | 148..423 | 176 | 23 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10282-PA | 462 | GA10282-PA | 1..462 | 1..464 | 2220 | 88.1 | Plus |
Dpse\GA21048-PA | 704 | GA21048-PA | 385..679 | 148..423 | 176 | 23 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17067-PA | 464 | GM17067-PA | 1..464 | 1..464 | 2421 | 97 | Plus |
Dsec\GM20096-PA | 693 | GM20096-PA | 367..668 | 141..423 | 189 | 24.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21813-PA | 464 | GD21813-PA | 1..464 | 1..464 | 2443 | 97.8 | Plus |
Dsim\GD25573-PA | 695 | GD25573-PA | 369..670 | 141..423 | 185 | 24.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17201-PA | 463 | GJ17201-PA | 1..463 | 1..464 | 2173 | 86 | Plus |
Dvir\GJ20083-PA | 545 | GJ20083-PA | 224..519 | 148..423 | 205 | 26 | Plus |
Translation from 413 to 1807
> GH16914.hyp MEADGLTNEQTEKVLQFQDLTGIEDMNVCRDVLIRHQWDLEVAFQEQLNI REGRPTMFAASTDVRAPAVLNDRFLQQVFSANMPGGRTVSRVPSGPVPRS FTGIIGYVINFVFQYFYSTLTSIVSAFVNLGGGNEARLVTDPLGDVMKFI REYYERYPEHPVFYQGTYAQALNDAKQELRFLIVYLHKDPAKNPDVESFC RNTLSARSVIDYINTHTLLWGCDVATPEGYRVMQSITVRSYPTMVMISLR ANRMMIVGRFEGDCTPEELLRRLQSVTNANEVWLSQARADRLERNFTQTL RRQQDEAYEQSLLADEEKERQRQRERDAVRQAEEAVEQARRDVELRKEEI ARQKIELATLVPSEPAADAVGAIAVVFKLPSGTRLERRFNQTDSVLDVYH YLFCHPDSPDEFEITTNFPKRVLFSKANLDAAGETGTAKETLTKTLQAVG LKNREVLFVNDLEA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Faf-PB | 464 | CG10372-PB | 1..464 | 1..464 | 2379 | 100 | Plus |
Faf-PA | 464 | CG10372-PA | 1..464 | 1..464 | 2379 | 100 | Plus |
casp-PC | 690 | CG8400-PC | 364..665 | 141..423 | 194 | 23.5 | Plus |
casp-PB | 695 | CG8400-PB | 369..670 | 141..423 | 194 | 23.5 | Plus |
casp-PA | 695 | CG8400-PA | 369..670 | 141..423 | 194 | 23.5 | Plus |