BDGP Sequence Production Resources |
Search the DGRC for GH17085
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 170 |
Well: | 85 |
Vector: | pOT2 |
Associated Gene/Transcript | CG3708-RB |
Protein status: | GH17085.pep: gold |
Preliminary Size: | 2060 |
Sequenced Size: | 2072 |
Gene | Date | Evidence |
---|---|---|
CG3708 | 2001-01-01 | Release 2 assignment |
CG3708 | 2001-09-19 | Blastp of sequenced clone |
CG3708 | 2003-01-01 | Sim4 clustering to Release 3 |
CG3708 | 2008-04-29 | Release 5.5 accounting |
CG3708 | 2008-08-15 | Release 5.9 accounting |
CG3708 | 2008-12-18 | 5.12 accounting |
2072 bp (2072 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058402
> GH17085.complete CAATATCCACTGGAGGCCATCCGGTGCAGCTGCAATCTGGTGGACTCGGG TCGATGAGGAAGATTACCGAATCGCTGGTGGAGGAATTGGACCCCCCGTG AGGATTAGTCGCCCATAAATTAGCATGCGACAGACGAACGGATTAGATTG GACAGCTACTTCGGTTTTTCTCCCAATAAATAATGGCGATTCGGGCCATC GGTTTATGGCACCCAAAAGACAACGGGCCCCACTTATCGCTCCGTCGGGC CAATAAAACCCAAGACCAGGCACCAAGACTGGGCCCAAGTGCCCAGGTGT CGCAGATAAGAGGCGAGCGGCGGGGCAGATAGCTTCAATCCAACAAAATA AACCATGCTCGGGATCTGAATGGAGCATTATGCTGCCGTCCGGTTCCGAC CTGCCGCAATGTCAGCTTATGGTGGGCCGATAAGTGCCGGGCATGACCCT CCCTTCAGTGTCCAGTCCACAGCCCATATCTGGGCTCATGAGCAGGTAGC TCCGATAACGCAACCGCCGACAGATATTGGCCACCGATTTGCCCGGAATT CGGCAAATCATGCACTGTTTCTGGAATTCGCCTTCATTAATTATGCACGT AACTCTGAAGTGGTATTCCTCGTAGGCGAAATTATTTGTTAGATTACGCA GTTATTGTAATCAAAAATGCGATTGCTTCTGGGCAAATCCAAGGAATCAT CAGCCGAATTTTCGTTCCCAGTAGTAGGCCGGTTTCTGTGGAAATCAAGG AACAGCTTTGATCTAGCATAGTAGTTTCCAAGTGCCCAGTCGCAGAGCTG GAATATACTTGTAGATTTATATACATATATGTTGCCAAATTTCGAAGTTA TTGCACCGAATTGCACAATGATTGGGATGGCTGACAGCGCGGAGGGGGTT ACCCAGGAAGACAGCCACACGGAGTCGAGGGCAGACGGCATCAGCGGGTC CTTGCGCTCCCTGGGCACATATACCCAGGAGTCCACAGAGCCGGCTTTGA GTCCGGCGGACCTTCCCGCCCGCAGCCGGAAGGCCTTTCTGCGGCACATG ATCGGCCAGCTGGCGGAGCCCGTGCAGAACCGCATACGGGCACTGCGGCA CAATCAGCTGCAACAGGTACGCATTTCGGAGCAGTTCTTCCGGGAAGTCT ACGAGCTGGAGCGACGTTTCTACGGCCAGAGCTGCGCGCTCTTCGATGCG AGGCGGGATATTTTGGAGGGTTCGGTGGAGCCACCGATCCAAACGGAGAA GACCTGGCCCGAGGACCCGCAGGATGCTCTGTACCTGGACTTCGGGAACA ACGAGGAGCTGCGACAGCTGAGGCAAAAACTGGCTCCGGTTTCGCCGACT ACGCTGGGTGTTCCACGCTTTTGGCTGACAGTTTTCCAGAACGTGCCCCT GCTCTCGGAGTTGGTCCAGGATCACGACGAGCCGCTTCTGGAGAGCCTAA TGGATGTGCGCCTGGCTTACGACCAGGACAGCTACATGGTCATCTTTCAG TTTCGGCCCAATAGCTTCCTGCACGATTCCTCGCTGCTGCTCACGAAGCG CTACTTTCTGCAGCACTCGGCGGACCCGGAGTATCCCTTTCTGTTCGAAG GGCCCGAAATAGTTCGTTGCGAAGGCTGCCACATCCACTGGCGCGATGGC TCCAATCTCACTCTCCAAACGGTGGAAAGCAGGCGAAGGAACAGAGCACA CCGAGTCACCAAGGTCATGCCTCGGGAGTCCTTCTTTCGCTTCTTTGCTC CGCCGCAGGCCTTGGACCTGTCGCTCGCGGATGAAAAGACCAAGCTGATC CTTGGCAACGATTTCGAAGTGGGCTTCCTGCTACGCACCCAAATCGTCCC GAAGGCGGTGCTCTTTTACACGGGCGACCTAGTTGACAGCCTGAGCGCGG CCTCTCCGGACAGTCGCTCCTTGTCCTCGGAGGCGGAACAGGAGCAGGTC TTGTGAGTGCGACGCGACTAGCTGTTTGCTAAACAAAATTTACAAGTGAA TGTGGTAATGATTTCTTATTAAATTCTACAGTTCGGCCAAAGCCAGTTCA TCACAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 822784..824837 | 2054..1 | 10180 | 99.7 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 928795..930851 | 2057..1 | 10285 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 936893..938949 | 2057..1 | 10285 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 822784..824837 | 1..2054 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3708-RA | 1..1128 | 829..1956 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3708-RA | 1..1128 | 829..1956 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3708-RB | 1..1089 | 868..1956 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3708-RA | 1..1128 | 829..1956 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3708-RB | 1..1089 | 868..1956 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3708-RA | 3..2056 | 1..2054 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3708-RA | 3..2056 | 1..2054 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3708-RB | 1..1301 | 754..2054 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3708-RA | 3..2056 | 1..2054 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3708-RB | 1..1301 | 754..2054 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 928798..930851 | 1..2054 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 928798..930851 | 1..2054 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 928798..930851 | 1..2054 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 822831..824884 | 1..2054 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 936896..938949 | 1..2054 | 100 | Minus |
Translation from 828 to 1955
> GH17085.hyp MLPNFEVIAPNCTMIGMADSAEGVTQEDSHTESRADGISGSLRSLGTYTQ ESTEPALSPADLPARSRKAFLRHMIGQLAEPVQNRIRALRHNQLQQVRIS EQFFREVYELERRFYGQSCALFDARRDILEGSVEPPIQTEKTWPEDPQDA LYLDFGNNEELRQLRQKLAPVSPTTLGVPRFWLTVFQNVPLLSELVQDHD EPLLESLMDVRLAYDQDSYMVIFQFRPNSFLHDSSLLLTKRYFLQHSADP EYPFLFEGPEIVRCEGCHIHWRDGSNLTLQTVESRRRNRAHRVTKVMPRE SFFRFFAPPQALDLSLADEKTKLILGNDFEVGFLLRTQIVPKAVLFYTGD LVDSLSAASPDSRSLSSEAEQEQVL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3708-PB | 362 | CG3708-PB | 1..362 | 14..375 | 1866 | 100 | Plus |
Nap1-PC | 370 | CG5330-PC | 30..325 | 59..353 | 602 | 40.9 | Plus |
Nap1-PB | 370 | CG5330-PB | 30..325 | 59..353 | 602 | 40.9 | Plus |
Nap1-PA | 370 | CG5330-PA | 30..325 | 59..353 | 602 | 40.9 | Plus |
mil-PA | 283 | CG5017-PA | 28..274 | 80..372 | 302 | 27.3 | Plus |
Translation from 828 to 1955
> GH17085.pep MLPNFEVIAPNCTMIGMADSAEGVTQEDSHTESRADGISGSLRSLGTYTQ ESTEPALSPADLPARSRKAFLRHMIGQLAEPVQNRIRALRHNQLQQVRIS EQFFREVYELERRFYGQSCALFDARRDILEGSVEPPIQTEKTWPEDPQDA LYLDFGNNEELRQLRQKLAPVSPTTLGVPRFWLTVFQNVPLLSELVQDHD EPLLESLMDVRLAYDQDSYMVIFQFRPNSFLHDSSLLLTKRYFLQHSADP EYPFLFEGPEIVRCEGCHIHWRDGSNLTLQTVESRRRNRAHRVTKVMPRE SFFRFFAPPQALDLSLADEKTKLILGNDFEVGFLLRTQIVPKAVLFYTGD LVDSLSAASPDSRSLSSEAEQEQVL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22051-PA | 365 | GF22051-PA | 12..364 | 22..374 | 1390 | 76.9 | Plus |
Dana\GF12054-PA | 369 | GF12054-PA | 30..324 | 59..352 | 585 | 39.3 | Plus |
Dana\GF16306-PA | 291 | GF16306-PA | 27..259 | 77..354 | 277 | 27.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12732-PA | 362 | GG12732-PA | 1..362 | 14..375 | 1750 | 93.9 | Plus |
Dere\GG19979-PA | 369 | GG19979-PA | 30..324 | 59..352 | 616 | 41 | Plus |
Dere\GG11578-PA | 289 | GG11578-PA | 27..270 | 77..364 | 320 | 27.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12416-PA | 390 | GH12416-PA | 52..371 | 57..373 | 1123 | 65.2 | Plus |
Dgri\GH20189-PA | 369 | GH20189-PA | 30..325 | 59..352 | 593 | 39 | Plus |
Dgri\GH16575-PA | 290 | GH16575-PA | 35..261 | 86..359 | 284 | 28.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3708-PB | 362 | CG3708-PB | 1..362 | 14..375 | 1866 | 100 | Plus |
Nap1-PC | 370 | CG5330-PC | 30..325 | 59..353 | 602 | 40.9 | Plus |
Nap1-PB | 370 | CG5330-PB | 30..325 | 59..353 | 602 | 40.9 | Plus |
Nap1-PA | 370 | CG5330-PA | 30..325 | 59..353 | 602 | 40.9 | Plus |
mil-PA | 283 | CG5017-PA | 28..274 | 80..372 | 302 | 27.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\Tes129-PA | 390 | GI15001-PA | 54..373 | 57..373 | 1126 | 65.2 | Plus |
Dmoj\GI18847-PA | 365 | GI18847-PA | 30..324 | 59..352 | 595 | 40 | Plus |
Dmoj\GI22030-PA | 289 | GI22030-PA | 6..266 | 56..364 | 305 | 25.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14420-PA | 376 | GL14420-PA | 13..340 | 26..354 | 1027 | 58.9 | Plus |
Dper\GL10917-PA | 372 | GL10917-PA | 31..325 | 59..352 | 606 | 38.9 | Plus |
Dper\GL12969-PA | 242 | GL12969-PA | 51..205 | 181..353 | 254 | 33.7 | Plus |
Dper\GL12968-PA | 350 | GL12968-PA | 21..260 | 78..359 | 227 | 25.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17630-PA | 376 | GA17630-PA | 1..340 | 14..354 | 1014 | 56.9 | Plus |
Dpse\GA18808-PA | 372 | GA18808-PA | 31..325 | 59..352 | 606 | 38.9 | Plus |
Dpse\GA23030-PA | 288 | GA23030-PA | 92..255 | 172..353 | 242 | 32.1 | Plus |
Dpse\GA23025-PA | 332 | GA23025-PA | 21..260 | 78..359 | 228 | 26.1 | Plus |
Dpse\GA27003-PB | 242 | GA27003-PB | 25..240 | 74..336 | 195 | 24.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19012-PA | 362 | GM19012-PA | 1..362 | 14..375 | 1845 | 96.7 | Plus |
Dsec\GM15492-PA | 370 | GM15492-PA | 30..324 | 59..352 | 611 | 41.1 | Plus |
Dsec\GM16360-PA | 283 | GM16360-PA | 12..266 | 71..364 | 323 | 28.2 | Plus |
Dsec\GM11702-PA | 164 | GM11702-PA | 21..147 | 223..364 | 238 | 35.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24995-PA | 370 | GD24995-PA | 30..324 | 59..352 | 612 | 41.1 | Plus |
Dsim\GD15341-PA | 79 | GD15341-PA | 1..79 | 297..375 | 392 | 97.5 | Plus |
Dsim\GD21354-PA | 283 | GD21354-PA | 12..256 | 71..354 | 311 | 28.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15359-PA | 399 | GJ15359-PA | 62..381 | 57..373 | 1123 | 64.6 | Plus |
Dvir\GJ20453-PA | 367 | GJ20453-PA | 6..324 | 22..352 | 606 | 37.9 | Plus |
Dvir\GJ10476-PA | 288 | GJ10476-PA | 26..266 | 76..364 | 297 | 26.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10174-PA | 360 | GK10174-PA | 5..344 | 19..356 | 1136 | 62.9 | Plus |
Dwil\GK15855-PA | 369 | GK15855-PA | 1..324 | 17..352 | 616 | 37.6 | Plus |
Dwil\GK11772-PA | 290 | GK11772-PA | 30..258 | 77..353 | 274 | 26.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\Nap1-PA | 371 | GE11512-PA | 30..324 | 59..352 | 618 | 41.4 | Plus |
Dyak\GE16558-PA | 123 | GE16558-PA | 1..120 | 14..130 | 512 | 85 | Plus |
Dyak\GE23767-PA | 290 | GE23767-PA | 28..261 | 77..354 | 305 | 28.1 | Plus |