BDGP Sequence Production Resources |
Search the DGRC for GH17155
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 171 |
Well: | 55 |
Vector: | pOT2 |
Associated Gene/Transcript | CG5339-RA |
Protein status: | GH17155.pep: gold |
Preliminary Size: | 1374 |
Sequenced Size: | 1239 |
Gene | Date | Evidence |
---|---|---|
CG5339 | 2001-01-01 | Release 2 assignment |
CG5339 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5339 | 2003-02-27 | Blastp of sequenced clone |
CG5339 | 2008-04-29 | Release 5.5 accounting |
CG5339 | 2008-08-15 | Release 5.9 accounting |
CG5339 | 2008-12-18 | 5.12 accounting |
1239 bp (1239 high quality bases) assembled on 2003-02-27
GenBank Submission: AY069153
> GH17155.complete AAAAATGATGGCACAACTAAGTTAAACACACAGAAGTAGAAAATGTAAAT AAAAGCACAATTATAGACTATTCTGTTAGCATGGCTGTGTATCGTCCCCG CGGCACCCTGGCCAGGGTAATCCACGCCAAATTCCACAACGACAACTCTC TGGAGGACATAGACACTCGGAAGTGGTACTGCCTGAACCACGAGCTGCCG CCGAGATTCCAGTCCAAGTTCGTGCCGCTCGAGCCGGATGCCACCACCGT GAGCTGGCTGGAGCGCACCAAGGCGCTTTCGGCAAACATCTGGACCCACT TGTGGCACGCCCTGGCTCGCTCAATCCTGCAGTTCTTCATGACCCAGACG GACATCAACGGGTTCCTGAAGCGCGGCTCCATGTTCATACTGTCCGAGGA ACAGTTTCGCAAGCTGCTAGTAGCAGGCGGCTTTCAGCCTGCCAGCGGTC AAGAACCTGTCACGTTGCTGGATATCGGAGCCGGGGACGGTGAGATTTCG CTGCGCGTGGCCAACACCGTTTCCGAGCTGAGCGGAAGTGCCGGGCTGCG GGTCTTCGCCACCGAGGCCAGTTGGACCATGCGCGATCGGCTGAAGAAGC TGAACTTCAACGTAATCACCGAGATAGACGGTCTGCAGAACCTGGAATTG ATTCTGTGCCTCAACGTATTGGACCGCTGCTTCGATTCATTCAAGCTGCT CGAGGACATTCACCTGGCACTAGCTCCCAATGGTCGAGCAGTTGTGGCCT TAGTACTTCCCTACATGCACTACGTGGAGACGAATACCTCGCATCTGCCG CTGCGCCCGCTGCTGGAGAACAACGGGCGACAGGCGTCGTTCGAGGAGGA GGCGGCCAGGTTTATGGAGCTGCTGGAGAACTGTGGCTACCGCGTGGAGG CATGGACCAAGGCGCCGTACTTGTGCGAGGGTGATCTCCACCAGTCGTTC TATTGGTTAATCGATTTAATTGTTGTCATTTCCAAGAAGACATTCTAGAT CAAAGCTTCCACATCCTAAAAAGAACCCTTCTGAAGTTATTGTAACCGTT TTCCTCGTAGAGTTAAGTGGCTGCATTGAGAAACTGAGCATTTATACTTA TTACAAATGTAGGCTATCAACTAGTTAAACAATTTATTCTTAAAGAATTA CCAAAAATGTAAATGGATAAACAAACATGTTTAAATTAAAGGGCGACATT CAAAGCCGCGTTCGAAACTGAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 19782936..19783694 | 1220..462 | 3780 | 99.9 | Minus |
chr2R | 21145070 | chr2R | 19783753..19784041 | 460..172 | 1430 | 99.7 | Minus |
chr2R | 21145070 | chr2R | 19784095..19784267 | 173..1 | 865 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 23896894..23897657 | 1222..459 | 3820 | 100 | Minus |
2R | 25286936 | 2R | 23897713..23898001 | 460..172 | 1445 | 100 | Minus |
2R | 25286936 | 2R | 23898055..23898227 | 173..1 | 865 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 23898093..23898856 | 1222..459 | 3820 | 100 | Minus |
2R | 25260384 | 2R | 23898912..23899200 | 460..172 | 1445 | 100 | Minus |
2R | 25260384 | 2R | 23899254..23899426 | 173..1 | 865 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 19783755..19784039 | 174..458 | 99 | <- | Minus |
chr2R | 19784095..19784267 | 1..173 | 100 | Minus | |
chr2R | 19782936..19783697 | 459..1220 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5339-RA | 1..918 | 81..998 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5339-RA | 1..918 | 81..998 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5339-RA | 1..918 | 81..998 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5339-RA | 1..918 | 81..998 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5339-RA | 1..918 | 81..998 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5339-RA | 8..1227 | 1..1220 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5339-RA | 8..1227 | 1..1220 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5339-RA | 20..1239 | 1..1220 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5339-RA | 8..1227 | 1..1220 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5339-RA | 20..1239 | 1..1220 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23898055..23898227 | 1..173 | 100 | Minus | |
2R | 23896896..23897657 | 459..1220 | 100 | <- | Minus |
2R | 23897715..23897999 | 174..458 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23898055..23898227 | 1..173 | 100 | Minus | |
2R | 23896896..23897657 | 459..1220 | 100 | <- | Minus |
2R | 23897715..23897999 | 174..458 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23898055..23898227 | 1..173 | 100 | Minus | |
2R | 23896896..23897657 | 459..1220 | 100 | <- | Minus |
2R | 23897715..23897999 | 174..458 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 19785578..19785750 | 1..173 | 100 | Minus | |
arm_2R | 19784419..19785180 | 459..1220 | 100 | <- | Minus |
arm_2R | 19785238..19785522 | 174..458 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23898113..23898874 | 459..1220 | 100 | <- | Minus |
2R | 23898932..23899216 | 174..458 | 100 | <- | Minus |
2R | 23899272..23899444 | 1..173 | 100 | Minus |
Translation from 80 to 997
> GH17155.hyp MAVYRPRGTLARVIHAKFHNDNSLEDIDTRKWYCLNHELPPRFQSKFVPL EPDATTVSWLERTKALSANIWTHLWHALARSILQFFMTQTDINGFLKRGS MFILSEEQFRKLLVAGGFQPASGQEPVTLLDIGAGDGEISLRVANTVSEL SGSAGLRVFATEASWTMRDRLKKLNFNVITEIDGLQNLELILCLNVLDRC FDSFKLLEDIHLALAPNGRAVVALVLPYMHYVETNTSHLPLRPLLENNGR QASFEEEAARFMELLENCGYRVEAWTKAPYLCEGDLHQSFYWLIDLIVVI SKKTF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5339-PA | 305 | CG5339-PA | 1..305 | 1..305 | 1596 | 100 | Plus |
Translation from 80 to 997
> GH17155.pep MAVYRPRGTLARVIHAKFHNDNSLEDIDTRKWYCLNHELPPRFQSKFVPL EPDATTVSWLERTKALSANIWTHLWHALARSILQFFMTQTDINGFLKRGS MFILSEEQFRKLLVAGGFQPASGQEPVTLLDIGAGDGEISLRVANTVSEL SGSAGLRVFATEASWTMRDRLKKLNFNVITEIDGLQNLELILCLNVLDRC FDSFKLLEDIHLALAPNGRAVVALVLPYMHYVETNTSHLPLRPLLENNGR QASFEEEAARFMELLENCGYRVEAWTKAPYLCEGDLHQSFYWLIDLIVVI SKKTF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12055-PA | 307 | GF12055-PA | 1..307 | 1..305 | 1482 | 90.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19980-PA | 305 | GG19980-PA | 1..305 | 1..305 | 1611 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20191-PA | 311 | GH20191-PA | 1..310 | 1..304 | 1297 | 79 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5339-PA | 305 | CG5339-PA | 1..305 | 1..305 | 1596 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20718-PA | 311 | GI20718-PA | 1..308 | 1..303 | 1331 | 81.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10919-PA | 219 | GL10919-PA | 1..217 | 87..303 | 998 | 86.8 | Plus |
Dper\GL10918-PA | 78 | GL10918-PA | 1..50 | 1..50 | 154 | 62 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18814-PA | 306 | GA18814-PA | 1..304 | 1..303 | 1396 | 86.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15495-PA | 305 | GM15495-PA | 1..305 | 1..305 | 1610 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24997-PA | 305 | GD24997-PA | 1..305 | 1..305 | 1615 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21879-PA | 310 | GJ21879-PA | 1..308 | 1..304 | 1270 | 76.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15857-PA | 305 | GK15857-PA | 3..303 | 4..303 | 1347 | 83.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE11513-PA | 305 | GE11513-PA | 1..305 | 1..305 | 1621 | 99 | Plus |