BDGP Sequence Production Resources |
Search the DGRC for GH17442
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 174 |
Well: | 42 |
Vector: | pOT2 |
Associated Gene/Transcript | CG12910-RA |
Protein status: | GH17442.pep: gold |
Preliminary Size: | 1821 |
Sequenced Size: | 1708 |
Gene | Date | Evidence |
---|---|---|
CG12910 | 2001-01-01 | Release 2 assignment |
CG12910 | 2001-10-10 | Blastp of sequenced clone |
CG12910 | 2008-04-29 | Release 5.5 accounting |
CG12910 | 2008-08-15 | Release 5.9 accounting |
CG12910 | 2008-12-18 | 5.12 accounting |
1708 bp (1708 high quality bases) assembled on 2001-10-10
GenBank Submission: AY060727
> GH17442.complete CGATTCCTGAGGAGCGGAGTCCCTGCCGCACAGTTTGTTCCCGCTCGAGA CATGCTGGCCGCCCCGGAGAACCGCTTCCAGCATGTGTACTTCGCGCTAT CCGCCCTGGTGGCTAGCGCCATGCTCGTCCTGGTCTACATATCCATGCGC TCGAGCCTTAACGAGCGGCTGCGCGAGGATCTGGCCAAGGCGCAGCGACA GATGATCTTCGAGAGGCCGAATCCACACTGGGACTACAGCAACAGTTGGC GCCGGATAGGGAACAGCACGCTCAGGCATGAGATATACTCGGCGTATTTC GATGCCAGGACGGATATCGTAGGTAATGTCCGCATGGATGACGAGCAGAT GACAATTGGTTCGCTGCGCATTTTCGCCATTCTGCCGGAGCGTCTGCGCG ACTCGTCGATAAACTGCATCGTGCGCTTCTCGGACTTCTCCAGCCAGGAG ATCAAGGCCGAGGAGGCGGGCGCCATGCACGATGTGCACAACAACACCTT TGCGGCGTGGAGCATCATGTGTCCGCTGCACGCCTCCCGCCGCTCTCCCT TGCGCCTTCCCCAGGCAGTGGCCTTGGCCTACGCGTCCAATCGACTCAGT CACCTTAGTCCTACCTTTATTCAGATCAGTTATCCCCGCAACATGACCAA CATGTTTGGCCGATCTCGACCCACGATCTCCGTGTGTGTGGGTCCCCTCC ACGAGAACTACTCGAATGTGCTGCGGCTGGTGGAGTTCGTGGAGATGTAC CGCCTGCAGGGTGCAACCCACTTCTACTTCTACTACGTAGAGGCCAGCGA GGAGGTGCTTCGCGTGCTGGAGCACTACCAACGGATTGGCCTGGCCGATG TCTTCGAATGGAATGTCCAAGCGCATATGCAGGATGTCCACTACGCCGGA ATCGTGGCGCAGTTCAACGACTGTGTGTACCGTGCCAATGTGGTGGACAA CTTTCGATACGCGGCAGTGGTGGACCTGGACGAGGTGGTGATGCCGCTGA AGCACAACACCTTGGCGGACTACCTGCGCCAGTGCGACGAGGGCCGCACC GCGGGCTTCGTCTTCCGCAACGTATTCTTCCACCGGCGAGACAGTAACGA CACCTTCAACGCCCCCAGCCACGTTCTCAACAGACTGCTCTACACCCAGT CGAAGGTGCGGCGAACGCTGGAGGTGCTGCCCGCCTACATACGAAGCAAG GTGGTGGTGAATGCCAGGGCCATTGTGGAGATGGGCAACCATCAGGTGTA CCGCGCCGCACCCGGATACGCCGATCATGTGGTACATCCCACGGTGGGCC TACTGTTCCACTACCGCGACAAGTGCATCAATTGCAAGATGGTGCTGATC GTTGACTATACGGCCCGGAGATTTGGCTCACTGCTCTTCGATCGAGTGGA CAACACGTGCCTGGAGGTTTTTCTAAATCGCGGCATCTGCGATCTGGTGT AGCCCGATCTTCGAGAGACGCCCCCTAAAAAATACCACAGATCTCTCGGG TCAGTTGTGTTCGTGGCCTCAGAACGTCGACATGCTGAAGTTCTGCTCGC TGCGAAGGAGCAAGGAGCCAGCGATTGTGGCTCCCAAAGTGGCCAAGAGT GTACGACAAATTAGAATAAGTCCTAGCCGTTCCCATATAAGTGTTATACC GTAATAAAATGTGCTTTAAGTGATTTGTGATGTAATCCGAAAAAAAAAAA AAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 6155646..6156708 | 627..1689 | 5180 | 99.2 | Plus |
chr2R | 21145070 | chr2R | 6155237..6155545 | 321..629 | 1530 | 99.7 | Plus |
chr2R | 21145070 | chr2R | 6154603..6154767 | 160..324 | 795 | 98.8 | Plus |
chr2R | 21145070 | chr2R | 6154372..6154530 | 1..159 | 750 | 98.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 10268143..10269207 | 627..1691 | 5325 | 100 | Plus |
2R | 25286936 | 2R | 10267734..10268042 | 321..629 | 1545 | 100 | Plus |
2R | 25286936 | 2R | 10267100..10267264 | 160..324 | 825 | 100 | Plus |
2R | 25286936 | 2R | 10266869..10267027 | 1..159 | 795 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 10269342..10270406 | 627..1691 | 5325 | 100 | Plus |
2R | 25260384 | 2R | 10268933..10269241 | 321..629 | 1545 | 100 | Plus |
2R | 25260384 | 2R | 10268299..10268463 | 160..324 | 825 | 100 | Plus |
2R | 25260384 | 2R | 10268068..10268226 | 1..159 | 795 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 6154372..6154530 | 1..159 | 98 | -> | Plus |
chr2R | 6154603..6154765 | 160..322 | 98 | -> | Plus |
chr2R | 6155239..6155545 | 323..629 | 99 | -> | Plus |
chr2R | 6155649..6156708 | 630..1689 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12910-RA | 1..1401 | 52..1452 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12910-RA | 1..1401 | 52..1452 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12910-RA | 1..1401 | 52..1452 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12910-RA | 1..1401 | 52..1452 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12910-RA | 1..1401 | 52..1452 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12910-RA | 1..1689 | 1..1689 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12910-RA | 158..1846 | 1..1689 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12910-RA | 14..1702 | 1..1689 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12910-RA | 1..1689 | 1..1689 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12910-RA | 14..1702 | 1..1689 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 10266869..10267027 | 1..159 | 100 | -> | Plus |
2R | 10267100..10267262 | 160..322 | 100 | -> | Plus |
2R | 10267736..10268042 | 323..629 | 100 | -> | Plus |
2R | 10268146..10269205 | 630..1689 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 10266869..10267027 | 1..159 | 100 | -> | Plus |
2R | 10267100..10267262 | 160..322 | 100 | -> | Plus |
2R | 10267736..10268042 | 323..629 | 100 | -> | Plus |
2R | 10268146..10269205 | 630..1689 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 10266869..10267027 | 1..159 | 100 | -> | Plus |
2R | 10267100..10267262 | 160..322 | 100 | -> | Plus |
2R | 10267736..10268042 | 323..629 | 100 | -> | Plus |
2R | 10268146..10269205 | 630..1689 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 6154374..6154532 | 1..159 | 100 | -> | Plus |
arm_2R | 6154605..6154767 | 160..322 | 100 | -> | Plus |
arm_2R | 6155241..6155547 | 323..629 | 100 | -> | Plus |
arm_2R | 6155651..6156710 | 630..1689 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 10268935..10269241 | 323..629 | 100 | -> | Plus |
2R | 10269345..10270404 | 630..1689 | 100 | Plus | |
2R | 10268068..10268226 | 1..159 | 100 | -> | Plus |
2R | 10268299..10268461 | 160..322 | 100 | -> | Plus |
Translation from 0 to 1451
> GH17442.hyp RFLRSGVPAAQFVPARDMLAAPENRFQHVYFALSALVASAMLVLVYISMR SSLNERLREDLAKAQRQMIFERPNPHWDYSNSWRRIGNSTLRHEIYSAYF DARTDIVGNVRMDDEQMTIGSLRIFAILPERLRDSSINCIVRFSDFSSQE IKAEEAGAMHDVHNNTFAAWSIMCPLHASRRSPLRLPQAVALAYASNRLS HLSPTFIQISYPRNMTNMFGRSRPTISVCVGPLHENYSNVLRLVEFVEMY RLQGATHFYFYYVEASEEVLRVLEHYQRIGLADVFEWNVQAHMQDVHYAG IVAQFNDCVYRANVVDNFRYAAVVDLDEVVMPLKHNTLADYLRQCDEGRT AGFVFRNVFFHRRDSNDTFNAPSHVLNRLLYTQSKVRRTLEVLPAYIRSK VVVNARAIVEMGNHQVYRAAPGYADHVVHPTVGLLFHYRDKCINCKMVLI VDYTARRFGSLLFDRVDNTCLEVFLNRGICDLV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12910-PC | 466 | CG12910-PC | 1..466 | 18..483 | 2438 | 100 | Plus |
CG12910-PA | 466 | CG12910-PA | 1..466 | 18..483 | 2438 | 100 | Plus |
CG12910-PB | 464 | CG12910-PB | 18..464 | 41..483 | 2274 | 97.1 | Plus |
CG9395-PD | 840 | CG9395-PD | 230..697 | 71..467 | 324 | 27 | Plus |
CG9395-PC | 840 | CG9395-PC | 230..697 | 71..467 | 324 | 27 | Plus |
Translation from 51 to 1451
> GH17442.pep MLAAPENRFQHVYFALSALVASAMLVLVYISMRSSLNERLREDLAKAQRQ MIFERPNPHWDYSNSWRRIGNSTLRHEIYSAYFDARTDIVGNVRMDDEQM TIGSLRIFAILPERLRDSSINCIVRFSDFSSQEIKAEEAGAMHDVHNNTF AAWSIMCPLHASRRSPLRLPQAVALAYASNRLSHLSPTFIQISYPRNMTN MFGRSRPTISVCVGPLHENYSNVLRLVEFVEMYRLQGATHFYFYYVEASE EVLRVLEHYQRIGLADVFEWNVQAHMQDVHYAGIVAQFNDCVYRANVVDN FRYAAVVDLDEVVMPLKHNTLADYLRQCDEGRTAGFVFRNVFFHRRDSND TFNAPSHVLNRLLYTQSKVRRTLEVLPAYIRSKVVVNARAIVEMGNHQVY RAAPGYADHVVHPTVGLLFHYRDKCINCKMVLIVDYTARRFGSLLFDRVD NTCLEVFLNRGICDLV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12788-PA | 467 | GF12788-PA | 1..466 | 1..465 | 2241 | 87.1 | Plus |
Dana\GF21673-PA | 806 | GF21673-PA | 238..696 | 58..448 | 330 | 27 | Plus |
Dana\GF20876-PA | 450 | GF20876-PA | 101..449 | 67..422 | 156 | 24.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24157-PA | 466 | GG24157-PA | 1..466 | 1..466 | 2439 | 97.2 | Plus |
Dere\GG10210-PA | 817 | GG10210-PA | 242..703 | 58..448 | 337 | 27.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21777-PA | 467 | GH21777-PA | 1..466 | 1..465 | 2111 | 81.5 | Plus |
Dgri\GH13458-PA | 897 | GH13458-PA | 263..740 | 58..465 | 308 | 26.6 | Plus |
Dgri\GH25108-PA | 894 | GH25108-PA | 263..740 | 58..465 | 308 | 26.6 | Plus |
Dgri\GH23635-PA | 368 | GH23635-PA | 98..357 | 209..422 | 272 | 29.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12910-PC | 466 | CG12910-PC | 1..466 | 1..466 | 2438 | 100 | Plus |
CG12910-PA | 466 | CG12910-PA | 1..466 | 1..466 | 2438 | 100 | Plus |
CG12910-PB | 464 | CG12910-PB | 18..464 | 24..466 | 2274 | 97.1 | Plus |
CG9395-PD | 840 | CG9395-PD | 230..697 | 54..450 | 324 | 27 | Plus |
CG9395-PC | 840 | CG9395-PC | 230..697 | 54..450 | 324 | 27 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19324-PA | 466 | GI19324-PA | 1..465 | 1..465 | 2134 | 82.6 | Plus |
Dmoj\GI14075-PA | 822 | GI14075-PA | 242..714 | 58..449 | 309 | 26.7 | Plus |
Dmoj\GI14981-PA | 593 | GI14981-PA | 238..535 | 164..445 | 155 | 27.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10456-PA | 444 | GL10456-PA | 1..443 | 24..465 | 2106 | 85.6 | Plus |
Dper\GL25717-PA | 863 | GL25717-PA | 256..739 | 58..465 | 323 | 26.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11901-PA | 467 | GA11901-PA | 1..466 | 1..465 | 2200 | 85.2 | Plus |
Dpse\GA21757-PA | 754 | GA21757-PA | 257..726 | 58..448 | 309 | 25.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21200-PA | 466 | GM21200-PA | 1..466 | 1..466 | 2473 | 98.9 | Plus |
Dsec\GM25641-PA | 807 | GM25641-PA | 234..695 | 58..448 | 318 | 26.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10727-PA | 466 | GD10727-PA | 1..466 | 1..466 | 2482 | 99.1 | Plus |
Dsim\GD22070-PA | 805 | GD22070-PA | 232..693 | 58..448 | 316 | 26.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22202-PA | 466 | GJ22202-PA | 1..465 | 1..465 | 2110 | 81.5 | Plus |
Dvir\GJ22525-PA | 368 | GJ22525-PA | 1..367 | 100..465 | 1725 | 85 | Plus |
Dvir\GJ18267-PA | 863 | GJ18267-PA | 250..741 | 58..465 | 314 | 26.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17787-PA | 467 | GK17787-PA | 1..466 | 1..465 | 2151 | 82.8 | Plus |
Dwil\GK17786-PA | 494 | GK17786-PA | 1..466 | 1..465 | 2151 | 82.8 | Plus |
Dwil\GK15290-PA | 556 | GK15290-PA | 200..419 | 257..465 | 229 | 31.1 | Plus |