BDGP Sequence Production Resources |
Search the DGRC for GH17516
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 175 |
Well: | 16 |
Vector: | pOT2 |
Associated Gene/Transcript | CG8768-RA |
Protein status: | GH17516.pep: gold |
Preliminary Size: | 1258 |
Sequenced Size: | 1186 |
Gene | Date | Evidence |
---|---|---|
CG8768 | 2001-01-01 | Release 2 assignment |
CG8768 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8768 | 2003-03-19 | Blastp of sequenced clone |
CG8768 | 2008-04-29 | Release 5.5 accounting |
CG8768 | 2008-08-15 | Release 5.9 accounting |
CG8768 | 2008-12-18 | 5.12 accounting |
1186 bp (1186 high quality bases) assembled on 2003-03-19
GenBank Submission: AY069155
> GH17516.complete GAAAAGTCGCCAATTTGGAGCAACCTCTTATGATTATTCCAAAAATGTCG AGGCATGCTCTGATAGGTGGTGGCACTGGCTTCATCGGTCGCAACCTGGC TAACCATTTGACCAAAAAGGGTTACGATGTGACGGTGATCTCCCGCATGC CAGGTGCGAAGCGTATCACCTGGCACGAGCTGGAGAAGAATGGTATTCCC GGATCCGTAAACGCCGTGGTAAATGCCACGGGCCAGAACACATTGGATCC AACGAGACGCTGGACTCCAGGATTCCAGCAGAATGTGTGGAACTCGCGAA TCAACTCCTCAAAAACTTTGGCTCAGGCTATTAAGTCGGCTCCCCAGGTC TCATCTTTCGTGAATCTATGCGGTGTGAGTCACTATAAACCCTCGGAGTC CAAGGTTTACACCGAGGAGGATCAGGTGCAAGGATTCGACTACATGTCCA GGTTGTGCTTGGCCTGGGAGGAGGCTGCACACACTGGTAGTGAGCAGGAT TGTAAAACCACCATCCTGCGGTGTGGCGCTGTTGTGGGTCATGGCGGGGG CATGGTTCAGTCCATGTGGCTGCCCTTTAAGTTTGGCGTAGGAGGACCAT TGGGTAATGGAAACCAAATAATGCCATGGATACACCTGCACGATCTGTGC AGCTTGATACAGTACATCATAGAGAAACCAGTGCCAGGAGTGGTCAATGC GGTGGCCCCAGAAATAACCAGCAATTTGGAGTTTAGCAAAGCCTTTGCCA AAGCACTTCATCGCCCGTGTATCTTCGGCGTTCCAGAGTTTGTTGTCCAA GCCATCTTTGGACCAGAGCGGGCAGCTCTGGTTTTAAGTGGTGCCAAGGT CAAGCCACAGAAAGCTCTATCATCCGGATTTAAATTTCAATATCCCAGCG TCAAAGAGGCTGTGACGCAACTGACCCTCAAAGGATAACCGAATCTACAC TGAATTCTGGTTACACGTATGCTTTATTATAAAGCAGTCTGTATATTAAA TAGATGTTAGTACCAAGCGCAAATTAAAACGAATTTCTGCGATAGGGGGA TTTATGAATCACGCCCTCCGAAAATAGACCCATTTAATTTGTTTACTCAT TAGTCTTGTCCACCAGTATTTCATCATTATTTTGGTACCACATTAAATGT AATCATTGACTTAATTCGAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 8579344..8579788 | 509..65 | 2225 | 100 | Minus |
chr2R | 21145070 | chr2R | 8578571..8578998 | 1168..741 | 2140 | 100 | Minus |
chr2R | 21145070 | chr2R | 8579054..8579285 | 741..510 | 1160 | 100 | Minus |
chr2R | 21145070 | chr2R | 8579844..8579911 | 68..1 | 340 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 12692081..12692525 | 509..65 | 2225 | 100 | Minus |
2R | 25286936 | 2R | 12691307..12691735 | 1169..741 | 2145 | 100 | Minus |
2R | 25286936 | 2R | 12691791..12692022 | 741..510 | 1160 | 100 | Minus |
2R | 25286936 | 2R | 12692581..12692648 | 68..1 | 340 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 12693280..12693724 | 509..65 | 2225 | 100 | Minus |
2R | 25260384 | 2R | 12692506..12692934 | 1169..741 | 2145 | 100 | Minus |
2R | 25260384 | 2R | 12692990..12693221 | 741..510 | 1160 | 100 | Minus |
2R | 25260384 | 2R | 12693780..12693847 | 68..1 | 340 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 8578571..8578998 | 741..1168 | 100 | <- | Minus |
chr2R | 8579055..8579285 | 510..740 | 100 | <- | Minus |
chr2R | 8579344..8579786 | 67..509 | 100 | <- | Minus |
chr2R | 8579846..8579911 | 1..66 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8768-RA | 1..909 | 30..938 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8768-RA | 1..909 | 30..938 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8768-RA | 1..909 | 30..938 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8768-RA | 1..909 | 30..938 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8768-RA | 1..909 | 30..938 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8768-RA | 41..1208 | 1..1168 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8768-RA | 41..1208 | 1..1168 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8768-RA | 43..1210 | 1..1168 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8768-RA | 41..1208 | 1..1168 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8768-RA | 43..1210 | 1..1168 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12692583..12692648 | 1..66 | 100 | Minus | |
2R | 12692081..12692523 | 67..509 | 100 | <- | Minus |
2R | 12691308..12691735 | 741..1168 | 100 | <- | Minus |
2R | 12691792..12692022 | 510..740 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12692583..12692648 | 1..66 | 100 | Minus | |
2R | 12692081..12692523 | 67..509 | 100 | <- | Minus |
2R | 12691308..12691735 | 741..1168 | 100 | <- | Minus |
2R | 12691792..12692022 | 510..740 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12692583..12692648 | 1..66 | 100 | Minus | |
2R | 12692081..12692523 | 67..509 | 100 | <- | Minus |
2R | 12691308..12691735 | 741..1168 | 100 | <- | Minus |
2R | 12691792..12692022 | 510..740 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 8578813..8579240 | 741..1168 | 100 | <- | Minus |
arm_2R | 8579297..8579527 | 510..740 | 100 | <- | Minus |
arm_2R | 8579586..8580028 | 67..509 | 100 | <- | Minus |
arm_2R | 8580088..8580153 | 1..66 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12692991..12693221 | 510..740 | 100 | <- | Minus |
2R | 12692507..12692934 | 741..1168 | 100 | <- | Minus |
2R | 12693280..12693722 | 67..509 | 100 | <- | Minus |
2R | 12693782..12693847 | 1..66 | 100 | Minus |
Translation from 2 to 937
> GH17516.hyp KVANLEQPLMIIPKMSRHALIGGGTGFIGRNLANHLTKKGYDVTVISRMP GAKRITWHELEKNGIPGSVNAVVNATGQNTLDPTRRWTPGFQQNVWNSRI NSSKTLAQAIKSAPQVSSFVNLCGVSHYKPSESKVYTEEDQVQGFDYMSR LCLAWEEAAHTGSEQDCKTTILRCGAVVGHGGGMVQSMWLPFKFGVGGPL GNGNQIMPWIHLHDLCSLIQYIIEKPVPGVVNAVAPEITSNLEFSKAFAK ALHRPCIFGVPEFVVQAIFGPERAALVLSGAKVKPQKALSSGFKFQYPSV KEAVTQLTLKG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8768-PA | 302 | CG8768-PA | 1..302 | 10..311 | 1597 | 100 | Plus |
Translation from 29 to 937
> GH17516.pep MIIPKMSRHALIGGGTGFIGRNLANHLTKKGYDVTVISRMPGAKRITWHE LEKNGIPGSVNAVVNATGQNTLDPTRRWTPGFQQNVWNSRINSSKTLAQA IKSAPQVSSFVNLCGVSHYKPSESKVYTEEDQVQGFDYMSRLCLAWEEAA HTGSEQDCKTTILRCGAVVGHGGGMVQSMWLPFKFGVGGPLGNGNQIMPW IHLHDLCSLIQYIIEKPVPGVVNAVAPEITSNLEFSKAFAKALHRPCIFG VPEFVVQAIFGPERAALVLSGAKVKPQKALSSGFKFQYPSVKEAVTQLTL KG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13097-PA | 297 | GF13097-PA | 1..296 | 6..301 | 1288 | 81.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22555-PA | 302 | GG22555-PA | 1..302 | 1..302 | 1555 | 94.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19955-PA | 298 | GH19955-PA | 1..298 | 6..301 | 1148 | 68.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8768-PA | 302 | CG8768-PA | 1..302 | 1..302 | 1597 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19914-PA | 295 | GI19914-PA | 1..295 | 6..301 | 1168 | 71.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17730-PA | 296 | GL17730-PA | 1..296 | 6..301 | 1247 | 76 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA24893-PA | 296 | GA24893-PA | 1..296 | 6..301 | 1244 | 75.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20339-PA | 302 | GM20339-PA | 1..302 | 1..302 | 1586 | 97.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25817-PA | 297 | GD25817-PA | 1..297 | 6..302 | 1561 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15081-PA | 298 | GJ15081-PA | 1..298 | 6..301 | 1158 | 69.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21688-PA | 296 | GK21688-PA | 1..296 | 6..301 | 1197 | 73.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13425-PA | 302 | GE13425-PA | 1..302 | 1..302 | 1569 | 96 | Plus |