BDGP Sequence Production Resources |
Search the DGRC for GH17623
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 176 |
Well: | 23 |
Vector: | pOT2 |
Associated Gene/Transcript | CG30159-RA |
Protein status: | GH17623.pep: gold |
Preliminary Size: | 1600 |
Sequenced Size: | 1562 |
Gene | Date | Evidence |
---|---|---|
CG30159 | 2001-09-19 | Blastp of sequenced clone |
CG30159 | 2008-04-29 | Release 5.5 accounting |
CG30159 | 2008-08-15 | Release 5.9 accounting |
CG30159 | 2008-12-18 | 5.12 accounting |
1562 bp (1562 high quality bases) assembled on 2001-09-19
GenBank Submission: AY060312
> GH17623.complete CACGAACGGTTCGAAAAGCGGAGCGCGCGTAAAATCATTCTGTAAATCAT TCAAAAGGCGGAAAACTCAAGGTGTGTGTGTGGGTTTTGTTTTCAAATTC CGTGTGCTTGTGTGTGTGAGAGAGGGCGAGAGCGACAGTGTCGTAGCAGG CAGTGTTGTAAGGTGCCGAAACAGCGATCCCAACCGGCACACTAGTTGTC CTGCTCGCACTCCAGTGAGGCAAATGTCAAAGTCTGGTCAGTAGCAAAAC AGAATTGCAGCCAAGAAAAGCGGAATCAGCGACAAAATTAGCCATTAGTT GGGTTTTACATATAGATTAGGCCAGCGAAACGACATAACGCTCCAAGTGG TAAATTATCCAATGGAGGCGGCCAAGGATTTTGCGGTGGCCAAGTACCAG GACTTATGTAACTTCCTGGAGCGGGATACGCGCGGCAGTGAGCTGGCCAT CTATGGCACCTCGGCCATCATGCTGGCCGTGGCCTATGCCAAACGGAAGC CGGCCTACCTGGTGCGCCAGTTTAAGCAGCCCTCGCACATCCCGGAGCGC CTGATCAACGAGCGCGTCATGCACACGGGCAAGATCGCCGGGGTCAAGCA GCAGGAGCAGGACACCCTGCTGATGATCCAGCACCGGCCGCTTTTCCCGA TCTTCACTAGCAGCAAACGCCTGCTGCCCGTCAAACTGCCGGGCGTGCGC GTCAATGCCAACGGCTACTCCTGGCTGCAGCAGTGTCTCATTGGGCGCGA GGCCACCTTTCTGCCCCTTAAATCCGCCAAGGGACAGGACTTTGTTGTCT GCCAGCTGTGCCTGGTCCATCCGCCGAGGGGCAACCGCCTGCTGGACGTC TCGGAGACCCTGCTCAAGCTCCGCTTCGCCCGATTCGTGCAGGATGCCGC CGCCGCGGTTAAGAAGAACGGGAAGTACTACCAGCATCTGAAGAAGGTGG AGCAGACCACAGCGGAAAAGGAGGCCTGGCTCTCCTGGGCCGCCGGCTAT CCCTACATCTGGCGCCGCTACAACGAACTGAGGCAGCGCTGGTTGCCCAA GGAGAAGCTGCTGCCGGAGCTAGTGCGCTGATTGCGATCTCCCCGTTCCT GCCTCGATGCTATTTACAGGGCTACCTAGCTCGCCACCATTAACTTAGTT CCATGGCCAGCTACTCTCTATATTTTTATTATGCCTGTTTACTAGCTTGT GCATTTGTGTCTTAGTGTTGCTTGCTATCTATTGTTATACGATTGGCAAA TATCATATACGATATAAGACAGCATTTGTTTACAAACCCTCGAGCACAAG TACACAAGTCAGTCTCAAAAGCTTATTAGTAAGGGGAATAGCTAGCGCGA CTTGCCCAACGCGACTTTCGATGCCCAGGCGGTACGTGATCGTGTGCTAA TTTCCACACCCAGTAGAGCCAAGAACGTCAGCATTTTTTAAATATTCAAA TAAGCGAAATGTTTTTACCACGGATGACATCAGTGCGTGTGCCTGTGTGT GTACGTGTGCGTGTTTCCCAAATAAAATGCCGAAATACCTAAAAAAAAAA AAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 2880114..2880467 | 1..354 | 100 | -> | Plus |
chr2R | 2880528..2881713 | 355..1540 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30159-RA | 1..720 | 362..1081 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30159-RC | 1..720 | 362..1081 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30159-RB | 1..720 | 362..1081 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30159-RA | 1..720 | 362..1081 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30159-RB | 1..720 | 362..1081 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30159-RA | 22..1556 | 1..1540 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30159-RC | 22..1561 | 1..1540 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30159-RC | 27..1566 | 1..1540 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30159-RA | 22..1556 | 1..1540 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30159-RC | 27..1566 | 1..1540 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 6992707..6993060 | 1..354 | 100 | -> | Plus |
2R | 6993121..6994306 | 355..1540 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 6992707..6993060 | 1..354 | 100 | -> | Plus |
2R | 6993121..6994306 | 355..1540 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 6992707..6993060 | 1..354 | 100 | -> | Plus |
2R | 6993121..6994306 | 355..1540 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 2880212..2880565 | 1..354 | 100 | -> | Plus |
arm_2R | 2880626..2881811 | 355..1540 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 6993906..6994259 | 1..354 | 100 | -> | Plus |
2R | 6994320..6995505 | 355..1540 | 100 | Plus |
Translation from 361 to 1080
> GH17623.pep MEAAKDFAVAKYQDLCNFLERDTRGSELAIYGTSAIMLAVAYAKRKPAYL VRQFKQPSHIPERLINERVMHTGKIAGVKQQEQDTLLMIQHRPLFPIFTS SKRLLPVKLPGVRVNANGYSWLQQCLIGREATFLPLKSAKGQDFVVCQLC LVHPPRGNRLLDVSETLLKLRFARFVQDAAAAVKKNGKYYQHLKKVEQTT AEKEAWLSWAAGYPYIWRRYNELRQRWLPKEKLLPELVR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13153-PA | 238 | GF13153-PA | 1..238 | 1..239 | 1046 | 84.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23238-PA | 239 | GG23238-PA | 1..239 | 1..239 | 1228 | 95 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21492-PA | 239 | GH21492-PA | 1..239 | 1..239 | 994 | 72.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG30159-PC | 239 | CG30159-PC | 1..239 | 1..239 | 1249 | 100 | Plus |
CG30159-PA | 239 | CG30159-PA | 1..239 | 1..239 | 1249 | 100 | Plus |
CG30159-PB | 239 | CG30159-PB | 1..239 | 1..239 | 1249 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19463-PA | 235 | GI19463-PA | 2..235 | 6..239 | 1012 | 76.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11132-PA | 239 | GL11132-PA | 1..239 | 1..239 | 1056 | 79.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15686-PA | 239 | GA15686-PA | 1..239 | 1..239 | 1056 | 79.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20911-PA | 239 | GM20911-PA | 1..239 | 1..239 | 1231 | 96.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10440-PA | 239 | GD10440-PA | 1..239 | 1..239 | 1255 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15123-PA | 239 | GJ15123-PA | 1..239 | 1..239 | 1024 | 75.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19403-PA | 242 | GK19403-PA | 7..242 | 4..239 | 994 | 74.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE19089-PA | 239 | GE19089-PA | 1..239 | 1..239 | 1226 | 95.4 | Plus |
Translation from 361 to 1080
> GH17623.hyp MEAAKDFAVAKYQDLCNFLERDTRGSELAIYGTSAIMLAVAYAKRKPAYL VRQFKQPSHIPERLINERVMHTGKIAGVKQQEQDTLLMIQHRPLFPIFTS SKRLLPVKLPGVRVNANGYSWLQQCLIGREATFLPLKSAKGQDFVVCQLC LVHPPRGNRLLDVSETLLKLRFARFVQDAAAAVKKNGKYYQHLKKVEQTT AEKEAWLSWAAGYPYIWRRYNELRQRWLPKEKLLPELVR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG30159-PC | 239 | CG30159-PC | 1..239 | 1..239 | 1249 | 100 | Plus |
CG30159-PA | 239 | CG30159-PA | 1..239 | 1..239 | 1249 | 100 | Plus |
CG30159-PB | 239 | CG30159-PB | 1..239 | 1..239 | 1249 | 100 | Plus |