Clone GH17661 Report

Search the DGRC for GH17661

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:176
Well:61
Vector:pOT2
Associated Gene/TranscriptCG33056-RA
Protein status:GH17661.pep: gold
Preliminary Size:1653
Sequenced Size:1623

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG33056 2001-07-04 Blastp of sequenced clone
CG33056 2008-04-29 Release 5.5 accounting
CG33056 2008-08-15 Release 5.9 accounting
CG33056 2008-12-18 5.12 accounting

Clone Sequence Records

GH17661.complete Sequence

1623 bp (1623 high quality bases) assembled on 2001-07-04

GenBank Submission: AY051519

> GH17661.complete
CAGCATGTCGCCCACTAACGTGCAAATGCAATTGGCACCTTTGAAGCTGG
GGCAGAAACCGCCAATTCGTAACGCAAACGTGGGCGTAACCGTCGTAGCT
GACCGCCGTAACTGATCGTCGTAGCAATGTCAAAGCAGTCATATCGGCAA
ATAAGGTTTCTGTGCAGAACCCAAAAACACACAGTCAAAACCATTCCGAA
GTCGAAAAAGTTTTTATCGCGAGTTTTGACCTCGACGTGAAAGTTTCCAG
CGCTGCGTGCACGTAAGTACGAAAATCATTTTTGGCATTGAGAGCTTCTG
TTTCGGCTGGTAATCAGAATAATTTCAGCTTAATTGCAGTTGGATATATA
ATACTCTGTAGAGAGCTAGTGCGCCATGGCGAACGTGAAGATAGTGGAGT
CCAAGCTGGACATATTCCACGCACCGCAGACACATTCCTTGGCCCATGCC
GTAGAGTCATCCTTTACGGCGGAACGGGGAACTCTCGCCTGGCAGTTTGC
CCTGATCTACGGGGATGTGGATGAACTACGGCAAAGAAGTGTTTCCAGAG
GCAACTGTGCCGTTCTGGAGCACAATGCCCGATTCATATACTATCTGGTG
ACCAAGTCGAGTCTCTACGAGGCCAGCACTTACGGCGATGTCCAGGCAGC
TTTGATCTGCATGCGGGAGCATATGCGCAACCATGAGATCACCAAAGTGG
CTATGCCCCGAATCTGCTGCGGCAACGATGGACTTGAATGGAAGCACGTG
AAGCGTCTGGTGCAGCAGACCTTCTCCCAGAGCGAGTATCCCATCGAGAT
ACTCATCTGTGAGCACGAAGACATGTCCAAGGAGCTGGCTGCTCCCAAGT
GTCAGATTACGGAGGCCAGGGGGAACCTGTTCAGCGCCCCGGAAAACTAC
GCCTTAGTGCACTCTGTCAGTGCGGACTTCGCTATGTGTGCGGGCATAAA
TCTGCAGTTCCGCTGCAAATTCGGACAAGTGGATGAGCTGAAGCGCCAAC
ACAAGCATACCGGAAATGTGGCAGTTCTGGAGCAGGATGGTAGACATATC
TACAACCTGGTGACCAAGGAGCGCAGCCACGAAAAGTGCACTTACGCAGC
TCTCTACTACGCATTGCTGGCCATGCGGGAACATATGAGGGAGCACGGAG
TGACCAAGTTGGCCATTCCCAGACTTGGATGCGGCATCGACCGTTTGGAT
TGGTTGCGCGTGCGGAGTCTGCTGGATCTGGTTTTCGCCGAGGATAGCGT
GGACATAATTGCATTCTTCTACACACCGCCACAAATGGTTAAGGACACGT
TGAACGTGGTTTGTCCCACCTGCCGGCACATGAAGACCATCCATTTGCCA
TCGAGGTCCGTTAGTGGATCAAGAAATTCGCTTCATCGCGAAAAGACTCC
CTTTTAATGTATATAGCCATCTTTGTTTGACACTCGAAATGGTTTTGCTT
GGGACTTGTGGCATCATATGCACCAAATACTTATATAGTTGATAAGAACG
ATACACCTAAGAGGTTTTTATAGCACACAAAGTTTCCATATTTGGTTATT
TATACTGTATTTAATGTATTAATAAATAAAACACGTCCTCGAGAGGATAT
TAACCAAAAAAAAAAAAAAAAAA

GH17661.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:35:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG33056-RA 1610 CG33056-RA 1..1608 1..1608 8040 100 Plus
CG33056-RD 1619 CG33056-RD 338..1617 329..1608 6400 100 Plus
CG33056-RE 1552 CG33056-RE 271..1550 329..1608 6400 100 Plus
CG33056-RD 1619 CG33056-RD 229..337 154..262 545 100 Plus
CG33056-RE 1552 CG33056-RE 164..270 156..262 535 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 07:30:55
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 21189001..21189522 675..154 2610 100 Minus
chr3L 24539361 chr3L 21187267..21187735 1605..1137 2345 100 Minus
chr3L 24539361 chr3L 21187887..21188191 1137..833 1525 100 Minus
chr3L 24539361 chr3L 21188252..21188411 834..675 800 100 Minus
chr3L 24539361 chr3L 21192081..21192237 157..1 785 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:56:54 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 07:30:53
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 21199995..21200516 675..154 2610 100 Minus
3L 28110227 3L 21198258..21198729 1608..1137 2360 100 Minus
3L 28110227 3L 21198881..21199185 1137..833 1525 100 Minus
3L 28110227 3L 21199246..21199405 834..675 800 100 Minus
3L 28110227 3L 21203076..21203232 157..1 785 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:57:18
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 21193095..21193616 675..154 2610 100 Minus
3L 28103327 3L 21191358..21191829 1608..1137 2360 100 Minus
3L 28103327 3L 21191981..21192285 1137..833 1525 100 Minus
3L 28103327 3L 21192346..21192505 834..675 800 100 Minus
3L 28103327 3L 21196176..21196332 157..1 785 100 Minus
Blast to na_te.dros performed on 2019-03-16 07:30:54 has no hits.

GH17661.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 07:31:37 Download gff for GH17661.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 21187267..21187734 1138..1605 100 <- Minus
chr3L 21187887..21188189 835..1137 100 <- Minus
chr3L 21188252..21188410 676..834 100 <- Minus
chr3L 21189001..21189520 156..675 100 <- Minus
chr3L 21192083..21192237 1..155 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:47:06 Download gff for GH17661.complete
Subject Subject Range Query Range Percent Splice Strand
CG33056-RD 1..1032 376..1407 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:26:00 Download gff for GH17661.complete
Subject Subject Range Query Range Percent Splice Strand
CG33056-RD 1..1032 376..1407 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:32:06 Download gff for GH17661.complete
Subject Subject Range Query Range Percent Splice Strand
CG33056-RB 1..1032 376..1407 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:59:04 Download gff for GH17661.complete
Subject Subject Range Query Range Percent Splice Strand
CG33056-RD 1..1032 376..1407 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:34:41 Download gff for GH17661.complete
Subject Subject Range Query Range Percent Splice Strand
CG33056-RB 1..1032 376..1407 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:24:47 Download gff for GH17661.complete
Subject Subject Range Query Range Percent Splice Strand
CG33056-RA 1..1605 1..1605 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:26:00 Download gff for GH17661.complete
Subject Subject Range Query Range Percent Splice Strand
CG33056-RA 1..1605 1..1605 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:32:06 Download gff for GH17661.complete
Subject Subject Range Query Range Percent Splice Strand
CG33056-RA 1..1605 1..1605 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:59:04 Download gff for GH17661.complete
Subject Subject Range Query Range Percent Splice Strand
CG33056-RA 1..1605 1..1605 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:34:41 Download gff for GH17661.complete
Subject Subject Range Query Range Percent Splice Strand
CG33056-RA 1..1605 1..1605 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:31:37 Download gff for GH17661.complete
Subject Subject Range Query Range Percent Splice Strand
3L 21199246..21199404 676..834 100 <- Minus
3L 21198881..21199183 835..1137 100 <- Minus
3L 21198261..21198728 1138..1605 100 <- Minus
3L 21199995..21200514 156..675 100 <- Minus
3L 21203078..21203232 1..155 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:31:37 Download gff for GH17661.complete
Subject Subject Range Query Range Percent Splice Strand
3L 21199246..21199404 676..834 100 <- Minus
3L 21198881..21199183 835..1137 100 <- Minus
3L 21198261..21198728 1138..1605 100 <- Minus
3L 21199995..21200514 156..675 100 <- Minus
3L 21203078..21203232 1..155 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:31:37 Download gff for GH17661.complete
Subject Subject Range Query Range Percent Splice Strand
3L 21199246..21199404 676..834 100 <- Minus
3L 21198881..21199183 835..1137 100 <- Minus
3L 21198261..21198728 1138..1605 100 <- Minus
3L 21199995..21200514 156..675 100 <- Minus
3L 21203078..21203232 1..155 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:32:06 Download gff for GH17661.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 21191361..21191828 1138..1605 100 <- Minus
arm_3L 21191981..21192283 835..1137 100 <- Minus
arm_3L 21192346..21192504 676..834 100 <- Minus
arm_3L 21193095..21193614 156..675 100 <- Minus
arm_3L 21196178..21196332 1..155 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:36:54 Download gff for GH17661.complete
Subject Subject Range Query Range Percent Splice Strand
3L 21191361..21191828 1138..1605 100 <- Minus
3L 21191981..21192283 835..1137 100 <- Minus
3L 21192346..21192504 676..834 100 <- Minus
3L 21193095..21193614 156..675 100 <- Minus
3L 21196178..21196332 1..155 100   Minus

GH17661.pep Sequence

Translation from 375 to 1406

> GH17661.pep
MANVKIVESKLDIFHAPQTHSLAHAVESSFTAERGTLAWQFALIYGDVDE
LRQRSVSRGNCAVLEHNARFIYYLVTKSSLYEASTYGDVQAALICMREHM
RNHEITKVAMPRICCGNDGLEWKHVKRLVQQTFSQSEYPIEILICEHEDM
SKELAAPKCQITEARGNLFSAPENYALVHSVSADFAMCAGINLQFRCKFG
QVDELKRQHKHTGNVAVLEQDGRHIYNLVTKERSHEKCTYAALYYALLAM
REHMREHGVTKLAIPRLGCGIDRLDWLRVRSLLDLVFAEDSVDIIAFFYT
PPQMVKDTLNVVCPTCRHMKTIHLPSRSVSGSRNSLHREKTPF*

GH17661.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:47:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10182-PA 343 GF10182-PA 4..343 2..343 1666 88.3 Plus
Dana\GF10183-PA 153 GF10183-PA 8..151 160..303 403 49.3 Plus
Dana\GF24299-PA 149 GF24299-PA 8..148 163..303 353 46.8 Plus
Dana\GF10183-PA 153 GF10183-PA 5..144 2..144 320 44.8 Plus
Dana\GF10182-PA 343 GF10182-PA 1..142 154..294 287 40.8 Plus
Dana\GF24299-PA 149 GF24299-PA 12..141 12..144 258 40.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:47:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13255-PA 343 GG13255-PA 1..343 1..343 1807 97.1 Plus
Dere\GG13256-PA 153 GG13256-PA 3..151 155..303 414 49.7 Plus
Dere\GG16164-PA 148 GG16164-PA 8..145 163..300 324 43.5 Plus
Dere\GG13256-PA 153 GG13256-PA 15..144 12..144 311 44.4 Plus
Dere\GG16164-PA 148 GG16164-PA 1..132 1..133 258 39.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:47:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16526-PA 344 GH16526-PA 5..344 3..343 1548 81.5 Plus
Dgri\GH16527-PA 150 GH16527-PA 5..147 160..302 362 49 Plus
Dgri\GH14966-PA 148 GH14966-PA 3..143 160..300 339 44.7 Plus
Dgri\GH16527-PA 150 GH16527-PA 1..145 1..148 308 43.9 Plus
Dgri\GH16526-PA 344 GH16526-PA 1..136 154..288 302 44.1 Plus
Dgri\GH14966-PA 148 GH14966-PA 3..142 5..147 262 36.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:33:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG33056-PE 343 CG33056-PE 1..343 1..343 1809 100 Plus
CG33056-PD 343 CG33056-PD 1..343 1..343 1809 100 Plus
CG33056-PB 343 CG33056-PB 1..343 1..343 1809 100 Plus
CG33056-PA 343 CG33056-PA 1..343 1..343 1809 100 Plus
CG33056-PC 320 CG33056-PC 1..320 1..343 1641 93.3 Plus
CG33054-PA 153 CG33054-PA 5..151 157..303 376 48.3 Plus
CG33054-PB 161 CG33054-PB 25..152 157..284 332 50.8 Plus
CG34261-PB 148 CG34261-PB 8..144 163..299 319 46 Plus
CG33054-PA 153 CG33054-PA 15..144 12..144 288 44.4 Plus
CG33054-PB 161 CG33054-PB 35..153 12..131 271 45 Plus
CG34261-PB 148 CG34261-PB 1..147 1..150 254 36.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:47:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12206-PA 345 GI12206-PA 5..345 3..343 1551 81.9 Plus
Dmoj\GI13127-PA 150 GI13127-PA 5..147 160..302 360 46.2 Plus
Dmoj\GI12207-PA 171 GI12207-PA 25..168 160..303 360 47.2 Plus
Dmoj\GI12207-PA 171 GI12207-PA 21..159 1..140 290 41.4 Plus
Dmoj\GI12206-PA 345 GI12206-PA 1..143 154..294 271 39.2 Plus
Dmoj\GI13127-PA 150 GI13127-PA 1..141 1..142 260 35.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:47:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24600-PA 380 GL24600-PA 4..309 2..306 1410 85 Plus
Dper\GL24600-PA 380 GL24600-PA 1..162 154..317 293 37.6 Plus
Dper\GL24666-PA 270 GL24666-PA 8..110 163..265 231 44.7 Plus
Dper\GL24601-PA 258 GL24601-PA 21..93 154..226 168 45.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:47:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA17253-PA 344 GA17253-PA 4..344 2..343 1644 86.8 Plus
Dpse\GA17252-PA 152 GA17252-PA 1..149 154..302 389 47.7 Plus
Dpse\GA23945-PA 151 GA23945-PA 8..146 163..301 345 44.6 Plus
Dpse\GA17252-PA 152 GA17252-PA 7..143 5..144 321 45 Plus
Dpse\GA17253-PA 344 GA17253-PA 1..142 154..294 294 40.8 Plus
Dpse\GA23945-PA 151 GA23945-PA 1..141 1..144 228 35.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:47:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22160-PA 343 GM22160-PA 1..343 1..343 1830 98.3 Plus
Dsec\GM22161-PA 149 GM22161-PA 5..132 157..284 347 50.8 Plus
Dsec\GM22346-PA 127 GM22346-PA 1..124 177..300 305 46.8 Plus
Dsec\GM22161-PA 149 GM22161-PA 15..142 12..145 284 42.5 Plus
Dsec\GM22346-PA 127 GM22346-PA 1..111 22..133 244 42.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:47:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12136-PA 343 GD12136-PA 1..343 1..343 1834 98.5 Plus
Dsim\GD14939-PA 148 GD14939-PA 8..145 163..300 327 45.7 Plus
Dsim\GD12137-PA 127 GD12137-PA 5..125 157..303 309 38.8 Plus
Dsim\GD14939-PA 148 GD14939-PA 1..132 1..133 258 39.8 Plus
Dsim\GD12137-PA 127 GD12137-PA 15..118 12..144 208 33.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:47:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ11439-PA 342 GJ11439-PA 5..342 3..343 1536 81.8 Plus
Dvir\GJ11440-PA 168 GJ11440-PA 25..168 160..303 361 47.2 Plus
Dvir\GJ11439-PA 342 GJ11439-PA 1..142 154..294 308 43 Plus
Dvir\GJ11440-PA 168 GJ11440-PA 21..161 1..142 290 40.8 Plus
Dvir\GJ13876-PA 143 GJ13876-PA 6..122 161..279 241 44.6 Plus
Dvir\GJ13876-PA 143 GJ13876-PA 1..99 1..100 151 34 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:47:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17372-PA 331 GK17372-PA 5..328 3..325 1501 82.4 Plus
Dwil\GK17373-PA 155 GK17373-PA 8..150 160..302 381 49 Plus
Dwil\GK16813-PA 148 GK16813-PA 6..146 161..301 354 44.7 Plus
Dwil\GK17373-PA 155 GK17373-PA 1..135 1..133 319 47.1 Plus
Dwil\GK17372-PA 331 GK17372-PA 1..163 154..317 278 36.7 Plus
Dwil\GK16813-PA 148 GK16813-PA 1..145 1..148 247 35.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:47:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE22958-PA 343 GE22958-PA 1..343 1..343 1805 96.8 Plus
Dyak\GE22354-PA 262 GE22354-PA 1..261 1..261 1324 94.3 Plus
Dyak\GE22355-PA 173 GE22355-PA 23..171 155..303 410 49 Plus
Dyak\GE23053-PA 148 GE23053-PA 8..145 163..300 328 44.9 Plus
Dyak\GE22355-PA 173 GE22355-PA 35..164 12..144 312 45.1 Plus
Dyak\GE19732-PA 127 GE19732-PA 1..124 177..300 299 46 Plus
Dyak\GE22354-PA 262 GE22354-PA 5..160 160..317 284 39 Plus
Dyak\GE23053-PA 148 GE23053-PA 1..132 1..133 260 39.1 Plus
Dyak\GE19732-PA 127 GE19732-PA 1..112 22..134 240 41.6 Plus

GH17661.hyp Sequence

Translation from 375 to 1406

> GH17661.hyp
MANVKIVESKLDIFHAPQTHSLAHAVESSFTAERGTLAWQFALIYGDVDE
LRQRSVSRGNCAVLEHNARFIYYLVTKSSLYEASTYGDVQAALICMREHM
RNHEITKVAMPRICCGNDGLEWKHVKRLVQQTFSQSEYPIEILICEHEDM
SKELAAPKCQITEARGNLFSAPENYALVHSVSADFAMCAGINLQFRCKFG
QVDELKRQHKHTGNVAVLEQDGRHIYNLVTKERSHEKCTYAALYYALLAM
REHMREHGVTKLAIPRLGCGIDRLDWLRVRSLLDLVFAEDSVDIIAFFYT
PPQMVKDTLNVVCPTCRHMKTIHLPSRSVSGSRNSLHREKTPF*

GH17661.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 09:51:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG33056-PE 343 CG33056-PE 1..343 1..343 1809 100 Plus
CG33056-PD 343 CG33056-PD 1..343 1..343 1809 100 Plus
CG33056-PB 343 CG33056-PB 1..343 1..343 1809 100 Plus
CG33056-PA 343 CG33056-PA 1..343 1..343 1809 100 Plus
CG33056-PC 320 CG33056-PC 1..320 1..343 1641 93.3 Plus