BDGP Sequence Production Resources |
Search the DGRC for GH17679
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 176 |
Well: | 79 |
Vector: | pOT2 |
Associated Gene/Transcript | Oli-RA |
Protein status: | GH17679.pep: gold |
Preliminary Size: | 1244 |
Sequenced Size: | 1086 |
Gene | Date | Evidence |
---|---|---|
CG5545 | 2001-01-01 | Release 2 assignment |
CG5545 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5545 | 2003-02-27 | Blastp of sequenced clone |
Oli | 2008-04-29 | Release 5.5 accounting |
Oli | 2008-08-15 | Release 5.9 accounting |
Oli | 2008-12-18 | 5.12 accounting |
1086 bp (1086 high quality bases) assembled on 2003-02-27
GenBank Submission: BT004905
> GH17679.complete TGCATCATAATAACTTTGATTTGCAAGGACTACCCTAAAAGATTACACAT CCCTTCAACCTTTTTTTCACAGCTGGAAAAGTCCCATAAAATACAAAAAA ATGGATCCCTCGAATCTTGCTTTTGGTTTTCCCGGTCTCCCCAACCACGG ACACATGCCAATACCTCCTACAGCCAATATGCTTGGTGGCCAGCATCCAG CACCCACCGCCAGCCCACCACAAAGCGTCCCCGGCCGTCGGACGCCACTT GGATCGGTTGGTCTGGGTGGTTTCTATGCCCAGGGAATGGGCATGTCCCA GCAGCCACCGACGGATGAGAACAAACCAGGGCCCAGTGCTCCGGAGAAGC CATTGAGTCCCACGGCCGCCGCCATCGCAGCCATTGCCATCAGTGGTGGC ACCACCACGGTGGCCGTGTCCAGTGGTGGCGCCAGCGGAAGTGGCTCCAA CAGTGGCAAGCAGAAAAACCGCCAGGGAAAGACGGTAAGGCTGAACATAA ATGCCCGGGAACGACGAAGGATGCACGATTTGAATGATGCCCTTGATGAG CTGAGAAGTGTGATTCCCTATGCCCATTCGCCTTCTGTGCGAAAGCTGTC GAAAATAGCCACCTTGCTGCTGGCTAAGAACTACATTCTGATGCAGCAAA ATGCTCTCGAGGAGTTGAGAAGACTTTTGGCCTATATACAAAGCACCACG GGAGCAGCGCCACTGGATTTGGGTGCATTTCCGGCGGCTGCCAAGTTGCA GGCTCTTCTTCAAGGACCTCACAACGAACCACCGACTAGCAGCAGTTAAA TAGGAGTGGGGGCCACCATAAACTATGGTTCAACTGATAAGCAATCCATT AATGAGCAATACTTTTAAGTCAATTGGAAAGCAAATGCCAAATACTTGTG TACTAGTCAGACGAAAGGAGGTTGATAAGGAGCCTCTTATCAGAGCAGCC AAGTGAAAATCTGTTCAGTGATATTTATTTTTGTCATAAGCATTTCTTAT TTATGCATTTACCCAATGTCAACCAATATGTGTAAGATGAATATTACCGA ATAAAGTATTATTGAAGTAAAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 17588781..17589452 | 1..672 | 100 | -> | Plus |
chr2L | 17589513..17589908 | 673..1068 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Oli-RA | 1..699 | 101..799 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Oli-RC | 1..699 | 101..799 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Oli-RA | 1..699 | 101..799 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Oli-RA | 1..699 | 101..799 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Oli-RD | 1..699 | 101..799 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Oli-RA | 634..1701 | 1..1068 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Oli-RC | 1..1068 | 1..1068 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Oli-RA | 739..1806 | 1..1068 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Oli-RA | 634..1701 | 1..1068 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Oli-RA | 739..1806 | 1..1068 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 17590140..17590811 | 1..672 | 100 | -> | Plus |
2L | 17590872..17591267 | 673..1068 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 17590140..17590811 | 1..672 | 100 | -> | Plus |
2L | 17590872..17591267 | 673..1068 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 17590140..17590811 | 1..672 | 100 | -> | Plus |
2L | 17590872..17591267 | 673..1068 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 17590140..17590811 | 1..672 | 100 | -> | Plus |
arm_2L | 17590872..17591267 | 673..1068 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 17590140..17590811 | 1..672 | 100 | -> | Plus |
2L | 17590872..17591267 | 673..1068 | 100 | Plus |
Translation from 100 to 798
> GH17679.hyp MDPSNLAFGFPGLPNHGHMPIPPTANMLGGQHPAPTASPPQSVPGRRTPL GSVGLGGFYAQGMGMSQQPPTDENKPGPSAPEKPLSPTAAAIAAIAISGG TTTVAVSSGGASGSGSNSGKQKNRQGKTVRLNINARERRRMHDLNDALDE LRSVIPYAHSPSVRKLSKIATLLLAKNYILMQQNALEELRRLLAYIQSTT GAAPLDLGAFPAAAKLQALLQGPHNEPPTSSS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Oli-PC | 232 | CG5545-PC | 1..232 | 1..232 | 1194 | 100 | Plus |
Oli-PB | 232 | CG5545-PB | 1..232 | 1..232 | 1194 | 100 | Plus |
Oli-PD | 232 | CG5545-PD | 1..232 | 1..232 | 1194 | 100 | Plus |
Oli-PA | 232 | CG5545-PA | 1..232 | 1..232 | 1194 | 100 | Plus |
dimm-PB | 390 | CG8667-PB | 123..206 | 102..180 | 158 | 45.3 | Plus |
Translation from 100 to 798
> GH17679.pep MDPSNLAFGFPGLPNHGHMPIPPTANMLGGQHPAPTASPPQSVPGRRTPL GSVGLGGFYAQGMGMSQQPPTDENKPGPSAPEKPLSPTAAAIAAIAISGG TTTVAVSSGGASGSGSNSGKQKNRQGKTVRLNINARERRRMHDLNDALDE LRSVIPYAHSPSVRKLSKIATLLLAKNYILMQQNALEELRRLLAYIQSTT GAAPLDLGAFPAAAKLQALLQGPHNEPPTSSS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14803-PA | 234 | GF14803-PA | 1..233 | 1..232 | 1018 | 91.1 | Plus |
Dana\GF14327-PA | 407 | GF14327-PA | 159..207 | 130..180 | 152 | 62.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21094-PA | 232 | GG21094-PA | 1..232 | 1..232 | 1184 | 99.6 | Plus |
Dere\GG21298-PA | 392 | GG21298-PA | 147..206 | 115..180 | 155 | 53 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11626-PA | 241 | GH11626-PA | 1..240 | 1..232 | 946 | 88.4 | Plus |
Dgri\GH23918-PA | 161 | GH23918-PA | 1..160 | 1..152 | 544 | 80.2 | Plus |
Dgri\GH13314-PA | 421 | GH13314-PA | 117..195 | 100..180 | 156 | 44.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Oli-PC | 232 | CG5545-PC | 1..232 | 1..232 | 1194 | 100 | Plus |
Oli-PB | 232 | CG5545-PB | 1..232 | 1..232 | 1194 | 100 | Plus |
Oli-PD | 232 | CG5545-PD | 1..232 | 1..232 | 1194 | 100 | Plus |
Oli-PA | 232 | CG5545-PA | 1..232 | 1..232 | 1194 | 100 | Plus |
dimm-PB | 390 | CG8667-PB | 123..206 | 102..180 | 158 | 45.3 | Plus |
dimm-PA | 390 | CG8667-PA | 123..206 | 102..180 | 158 | 45.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17928-PA | 241 | GI17928-PA | 1..239 | 1..232 | 962 | 87.6 | Plus |
Dmoj\GI12220-PA | 413 | GI12220-PA | 138..197 | 115..180 | 151 | 53 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14513-PA | 236 | GL14513-PA | 1..235 | 1..232 | 988 | 89.9 | Plus |
Dper\GL26661-PA | 421 | GL26661-PA | 142..201 | 115..180 | 153 | 53 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18959-PA | 236 | GA18959-PA | 1..235 | 1..232 | 988 | 89.9 | Plus |
Dpse\GA21247-PA | 421 | GA21247-PA | 142..201 | 115..180 | 153 | 53 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17248-PA | 232 | GM17248-PA | 1..232 | 1..232 | 1184 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24118-PA | 232 | GD24118-PA | 1..232 | 1..232 | 1190 | 100 | Plus |
Dsim\GD24318-PA | 386 | GD24318-PA | 145..204 | 115..180 | 153 | 53 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17701-PA | 241 | GJ17701-PA | 1..239 | 1..232 | 896 | 87.1 | Plus |
Dvir\GJ17849-PA | 418 | GJ17849-PA | 141..200 | 115..180 | 154 | 53 | Plus |