BDGP Sequence Production Resources |
Search the DGRC for GH17891
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 178 |
Well: | 91 |
Vector: | pOT2 |
Associated Gene/Transcript | Prat2-RB |
Protein status: | GH17891.pep: gold |
Preliminary Size: | 2096 |
Sequenced Size: | 1929 |
Gene | Date | Evidence |
---|---|---|
CG10078 | 2001-01-01 | Release 2 assignment |
CG10078 | 2002-04-04 | Blastp of sequenced clone |
CG10078 | 2003-01-01 | Sim4 clustering to Release 3 |
Prat2 | 2008-04-29 | Release 5.5 accounting |
Prat2 | 2008-08-15 | Release 5.9 accounting |
Prat2 | 2008-12-18 | 5.12 accounting |
1929 bp (1929 high quality bases) assembled on 2002-04-04
GenBank Submission: AY095010
> GH17891.complete CAATCAATGCAGACGTGAACAATTCCAGTAGTGACCGAGTGTTCGACTTA GCCAGCGATCTCGTGCAAAGTGTACAGTGTCTCAATCGTAGTCAATACCA ATTCTCAACCAAGAAAATCGATACTCAAAACATACGTAGAAATAGAAGTT ACTAAAATCCAAGCATATGATGGCGCAAAGTGATTCTGGAAATTGCTGTG CCAAGCTTAATAAAGATGAGTGCTGCCAGAAGACAAAGGATGTGATCTTG AGCGGCGTATCTCCCAAAATGTTTCCCGACAAAATCTACAAGTCTGTTCA ACCCAAAGGAGAGGATGCCACCGGAATGACCTGCGAATGCGGTGTTTTTG CAGCCATCGCTTGCGGGGATTACCCAACACAACTGGACATAGCACAGATG ATCTGCCTCGGTCTGGTGGCTCTGCAGCATCGTGGCCAGGAGTCGGCGGG AATAGTGACCAGTTTGGGCAAGTCCTCCAAGAATTTCAGCGTACACAAGG GCATGGGCATGATCAACAATCTGTTCAATGACGAGGCGATCAGGAAGTTA AAGGGTAACCTGGGAATAGGACACACCCGGTATTCCACGGCCGCAGCCTC GGAAGTTGTGAACTGCCAGCCGTTTGTGGTGCACACTGCCCATGGAGCAC TGGCCATTGCCCACAATGGTGAGCTAGTGAACTGCGAGTCCCTGAGGAGG GAGGTCCTGGAGCGAGGAGTGGGCCTGTCTACGCACAGTGACAGTGAACT TATTGCCCAATCCCTGTGCTGTGCACCAGAGGATGTGTCGGAGCACGATG GACCCAATTGGCCGGCCAGAATTCGCCATTTCATGACCCTGGCTCCACTC TCCTACTCCCTGGTCGTGATGCACAAGGATAAGATCTACGCTGTCCGCGA TTCCTATGGCAATAGACCGCTGTGCTTGGGAAAAATCGTGCCCGTTGATG CAGGACATGCGAATATCAATGACCAACTGGCCGAGGGTTGGGTGGTCAGT AGTGAAAGCTGCGGATTCCTCTCCATCGGAGCCAGATATGTTCGCGAGGT GGAGCCCGGTGAGATCATCGAGCTGTCACGAAATGGTTATAGAACCGTGG ATATCGTTGAAAGACCGGACTATAAGCGCATGGCATTCTGCATCTTTGAG TACGTCTACTTTGCCCGCAGTGATTCCATGTTCGAGGGTCAGATGGTTTA CTCAGCCCGCCTGCAATGTGGTCGCCAGTTGGCCAGGGAATCGCCATTAG ATGCGGATTTGGTCAGCTCGGTTCCGGAATCGGGCACAGCAGCTGCCCAT GGTTATGCCAGGGAGTCGGGACTGCCATTCGGGGAAGTTCTCTGCAAGAA TCGCTATGTGGGCCGCACGTTCATCCAACCCTCGACGAGATTGCGACAGT TGGGCGTGGCCAAAAAGTTTGGTGCCCTGGCTCAAAATGTCGAGGGCAAG CGGATCGTGCTAGTCGATGACTCCATAGTGAGGGGAAATACCATTGGACC GATTATCAAACTCCTGCGAGATGCCGGCGCCACCGAGGTGCACATTCGCA TTGCCAGTCCTCCGCTGCAATATCCCTGCTACATGGGTATCAATATACCC ACTCGTGAGGAGCTAATAGCCAACAAATTGAATGCGGATCAGCTGGCGGA TCACGTGGGTGCGGATAGTCTGGCCTATTTGAGTGTGGAGGGTCTGGTCA AGGCCGTCCAGATGAACAAGGCCCATGTGAATCCACTCAAAGCTGGCTAC TGCACCGCTTGCCTAACGGGCGAGTATCCTGGCGGATTGCCGGAGGAGCT CAGCTGGTAGAATCTCTCAGCAATTATTAATTTCATAGGATTAAGGTAGT TCTTAGCTTCAGCTTGTATATAAATAAATATATTTAAAATTTCGGGTCTT TGACCTATCACAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Prat2-RB | 2177 | Prat2-RB | 227..2143 | 1..1917 | 9585 | 100 | Plus |
Prat2-RA | 1743 | Prat2-RA | 209..1743 | 383..1917 | 7675 | 100 | Plus |
Prat.a | 2151 | Prat.a | 555..894 | 604..943 | 545 | 77.3 | Plus |
Prat.a | 2151 | Prat.a | 285..485 | 334..534 | 450 | 81.5 | Plus |
Prat.a | 2151 | Prat.a | 931..1156 | 980..1205 | 440 | 79.6 | Plus |
Prat.a | 2151 | Prat.a | 1423..1577 | 1472..1626 | 325 | 80.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 6904309..6905837 | 1911..383 | 7510 | 99.4 | Minus |
chr3R | 27901430 | chr3R | 3736114..3737490 | 1710..334 | 1860 | 75.7 | Minus |
chr3L | 24539361 | chr3L | 6906948..6907162 | 215..1 | 970 | 96.7 | Minus |
chr3L | 24539361 | chr3L | 6906721..6906889 | 382..214 | 830 | 99.4 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 6911993..6913527 | 1917..383 | 7675 | 100 | Minus |
3R | 32079331 | 3R | 7910078..7911454 | 1710..334 | 1830 | 75.5 | Minus |
3L | 28110227 | 3L | 6914641..6914855 | 215..1 | 1075 | 100 | Minus |
3L | 28110227 | 3L | 6914414..6914582 | 382..214 | 845 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 6905093..6906627 | 1917..383 | 7675 | 100 | Minus |
3L | 28103327 | 3L | 6907741..6907955 | 215..1 | 1075 | 100 | Minus |
3L | 28103327 | 3L | 6907514..6907682 | 382..214 | 845 | 100 | Minus |
3R | 31820162 | 3R | 7651676..7652015 | 943..604 | 545 | 77.3 | Minus |
3R | 31820162 | 3R | 7652085..7652285 | 534..334 | 450 | 81.5 | Minus |
3R | 31820162 | 3R | 7651414..7651639 | 1205..980 | 440 | 79.6 | Minus |
3R | 31820162 | 3R | 7650993..7651147 | 1626..1472 | 325 | 80.6 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 6906948..6907162 | 1..215 | 96 | Minus | |
chr3L | 6904309..6905837 | 383..1911 | 97 | <- | Minus |
chr3L | 6906721..6906887 | 216..382 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prat2-RB | 1..1644 | 167..1810 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prat2-RB | 1..1644 | 167..1810 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prat2-RB | 1..1644 | 167..1810 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prat2-RB | 1..1644 | 167..1810 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prat2-RB | 1..1644 | 167..1810 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prat2-RB | 4..1914 | 1..1911 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prat2-RB | 4..1914 | 1..1911 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prat2-RB | 22..1932 | 1..1911 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prat2-RB | 4..1914 | 1..1911 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prat2-RB | 22..1932 | 1..1911 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 6911999..6913527 | 383..1911 | 100 | <- | Minus |
3L | 6914414..6914580 | 216..382 | 100 | <- | Minus |
3L | 6914641..6914855 | 1..215 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 6911999..6913527 | 383..1911 | 100 | <- | Minus |
3L | 6914414..6914580 | 216..382 | 100 | <- | Minus |
3L | 6914641..6914855 | 1..215 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 6911999..6913527 | 383..1911 | 100 | <- | Minus |
3L | 6914414..6914580 | 216..382 | 100 | <- | Minus |
3L | 6914641..6914855 | 1..215 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 6905099..6906627 | 383..1911 | 100 | <- | Minus |
arm_3L | 6907514..6907680 | 216..382 | 100 | <- | Minus |
arm_3L | 6907741..6907955 | 1..215 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 6907741..6907955 | 1..215 | 100 | Minus | |
3L | 6905099..6906627 | 383..1911 | 100 | <- | Minus |
3L | 6907514..6907680 | 216..382 | 100 | <- | Minus |
Translation from 166 to 1809
> GH17891.pep MMAQSDSGNCCAKLNKDECCQKTKDVILSGVSPKMFPDKIYKSVQPKGED ATGMTCECGVFAAIACGDYPTQLDIAQMICLGLVALQHRGQESAGIVTSL GKSSKNFSVHKGMGMINNLFNDEAIRKLKGNLGIGHTRYSTAAASEVVNC QPFVVHTAHGALAIAHNGELVNCESLRREVLERGVGLSTHSDSELIAQSL CCAPEDVSEHDGPNWPARIRHFMTLAPLSYSLVVMHKDKIYAVRDSYGNR PLCLGKIVPVDAGHANINDQLAEGWVVSSESCGFLSIGARYVREVEPGEI IELSRNGYRTVDIVERPDYKRMAFCIFEYVYFARSDSMFEGQMVYSARLQ CGRQLARESPLDADLVSSVPESGTAAAHGYARESGLPFGEVLCKNRYVGR TFIQPSTRLRQLGVAKKFGALAQNVEGKRIVLVDDSIVRGNTIGPIIKLL RDAGATEVHIRIASPPLQYPCYMGINIPTREELIANKLNADQLADHVGAD SLAYLSVEGLVKAVQMNKAHVNPLKAGYCTACLTGEYPGGLPEELSW*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10885-PA | 544 | GF10885-PA | 2..544 | 4..547 | 2770 | 95.2 | Plus |
Dana\GF16846-PA | 546 | GF16846-PA | 44..546 | 49..547 | 2281 | 83.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15019-PA | 546 | GG15019-PA | 1..546 | 2..547 | 2913 | 99.1 | Plus |
Dere\GG24862-PA | 543 | GG24862-PA | 42..543 | 49..547 | 2266 | 83.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16106-PA | 546 | GH16106-PA | 1..546 | 2..547 | 2692 | 91.6 | Plus |
Dgri\GH19023-PA | 542 | GH19023-PA | 42..542 | 47..547 | 2253 | 83.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Prat2-PB | 547 | CG10078-PB | 1..547 | 1..547 | 2865 | 100 | Plus |
Prat2-PA | 470 | CG10078-PA | 1..470 | 78..547 | 2446 | 100 | Plus |
Prat-PB | 546 | CG2867-PB | 45..546 | 49..547 | 2212 | 83.5 | Plus |
Prat-PA | 546 | CG2867-PA | 45..546 | 49..547 | 2212 | 83.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12370-PA | 546 | GI12370-PA | 1..546 | 2..547 | 2717 | 92.1 | Plus |
Dmoj\GI22836-PA | 543 | GI22836-PA | 43..543 | 47..547 | 2261 | 83.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12141-PA | 415 | GL12141-PA | 38..415 | 47..422 | 1646 | 79.3 | Plus |
Dper\GL13231-PA | 699 | GL13231-PA | 1..296 | 2..298 | 1450 | 90.4 | Plus |
Dper\GL12142-PA | 84 | GL12142-PA | 1..84 | 473..547 | 292 | 70.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10055-PA | 545 | GA10055-PA | 1..545 | 2..547 | 2737 | 93.3 | Plus |
Dpse\GA15494-PB | 509 | GA15494-PB | 2..509 | 49..547 | 2266 | 82.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13811-PA | 547 | GM13811-PA | 1..547 | 1..547 | 2909 | 98.7 | Plus |
Dsec\GM10447-PA | 547 | GM10447-PA | 46..547 | 49..547 | 2281 | 83.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13106-PA | 547 | GD13106-PA | 1..547 | 1..547 | 2916 | 99.1 | Plus |
Dsim\GD19452-PA | 547 | GD19452-PA | 44..547 | 49..547 | 2213 | 81.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\Prat2-PA | 543 | GJ12264-PA | 1..543 | 2..547 | 2719 | 92.9 | Plus |
Dvir\Prat-PA | 544 | GJ24696-PA | 44..544 | 47..547 | 2254 | 83.3 | Plus |
Translation from 166 to 1809
> GH17891.hyp MMAQSDSGNCCAKLNKDECCQKTKDVILSGVSPKMFPDKIYKSVQPKGED ATGMTCECGVFAAIACGDYPTQLDIAQMICLGLVALQHRGQESAGIVTSL GKSSKNFSVHKGMGMINNLFNDEAIRKLKGNLGIGHTRYSTAAASEVVNC QPFVVHTAHGALAIAHNGELVNCESLRREVLERGVGLSTHSDSELIAQSL CCAPEDVSEHDGPNWPARIRHFMTLAPLSYSLVVMHKDKIYAVRDSYGNR PLCLGKIVPVDAGHANINDQLAEGWVVSSESCGFLSIGARYVREVEPGEI IELSRNGYRTVDIVERPDYKRMAFCIFEYVYFARSDSMFEGQMVYSARLQ CGRQLARESPLDADLVSSVPESGTAAAHGYARESGLPFGEVLCKNRYVGR TFIQPSTRLRQLGVAKKFGALAQNVEGKRIVLVDDSIVRGNTIGPIIKLL RDAGATEVHIRIASPPLQYPCYMGINIPTREELIANKLNADQLADHVGAD SLAYLSVEGLVKAVQMNKAHVNPLKAGYCTACLTGEYPGGLPEELSW*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Prat2-PB | 547 | CG10078-PB | 1..547 | 1..547 | 2865 | 100 | Plus |
Prat2-PA | 470 | CG10078-PA | 1..470 | 78..547 | 2446 | 100 | Plus |
Prat-PB | 546 | CG2867-PB | 45..546 | 49..547 | 2212 | 83.5 | Plus |
Prat-PA | 546 | CG2867-PA | 45..546 | 49..547 | 2212 | 83.5 | Plus |