BDGP Sequence Production Resources |
Search the DGRC for GH17930
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 179 |
Well: | 30 |
Vector: | pOT2 |
Associated Gene/Transcript | CG30350-RA |
Protein status: | GH17930.pep: gold |
Preliminary Size: | 1408 |
Sequenced Size: | 1340 |
Gene | Date | Evidence |
---|---|---|
CG30350 | 2001-07-04 | Blastp of sequenced clone |
CG30350 | 2003-01-01 | Sim4 clustering to Release 3 |
CG30350 | 2008-04-29 | Release 5.5 accounting |
CG30350 | 2008-08-15 | Release 5.9 accounting |
CG30350 | 2008-12-18 | 5.12 accounting |
1340 bp (1340 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051522
> GH17930.complete GTTAACAATTCCAAGTGGAAAATTCTCGATTTAGCTGCTAGTTTTATTTA TTGATAAAGGTCTTTTCGCCCAATTTAAATGGCTGATTTCCCGATGTGTG TGACCCCGTCGCAGCGAGAGTTGGCTCAGCTCACGGAGCAGGAGCGCCTG ACCGCCCAGCTGAAGGTAAAGGAGCGCAAGAAGGCGGCCAAGGCCAAGCC GAAGAAGATCCTGGGCGGCCTGCTTATGGTGAATCACATGAAGATGTGGC ACCAGCACCGTGAGCGGATCAAGGGGGCGATCAGCACGGTGGACGCCGAA GCGCCCAACTTTCAGGCGGCCCGCATCACCGGAGTGAACAACCTCCGAGA CGAGGCGCAAACATTTATGAAGCGCACCAAGGCCAACATCCAGCTGCTGG TGGAGATTTCGCGGACGATGCGCACCCACGGAGCCATCAATCCGTTTCGA TACGATACGGTGCACGCCGTCTCCAGTATTCCCATGGCCCTGCTCACCCT GGAGAAACTGGAGCGCGATAATCGCGACTTCGGTCGACGCATTCTGGAGG TAAACAGCGAAGTGGACTCCGGTCTGTCGGACAAGCGGATGCGGGAGGGC AGGAGCTCGACGCCCGTCGCTCCACTGGAGTTGCCGCCCCAAGCAATGGC CAAGTACGAGGCCTTCAACATCCCGCTACCCAAGTCGGATGCCGAACTAC GCCGCCTCTTTCGACCGCGTATCTACTTTGACCTCTATCTCAAAGATGCC CGACCACTGGGCAGGTTTGTGGTCCAGCTGTACACAGAGGCTGCTCCGCT GGTGGTGCTGCAGCTGATCAAGTCCTGCATGTGCAATCAGCACTCGAAGT TTATGGTCAAACGACTGTTCCCCAATCTCTGGCTGGAAACCGATTTGATG CTGTCGTCGGACTCGCTACTCCACCAGCCATTGGAGTACGACGCCAAAGT TATTGACCACGGGGCCTCCAGCTACGTATTATCCTTCAGCAAAGCTTACG TCACGGGATTCACCCACCACCTGTCCTTCGCCATCTCGTTCAAGCCGCTT ACCGTGGTCAATGGATCCCGCGTGGGATTCGGACGGATTGTGAAGGGCAG CAAGATATGCGAGTGCATTCAGAGTTACGGCACTAAGAACGGAAAGCTCA GCCGGGGTCTGCTTTTTACCAGCTGCGGATTGCTGTAGCCCGCAGGTGGT TCCTATAAATTGTTCATGTGTGCAGGGAATATTTTTGAGCCATGTAAATC GTAGTCAGTACTTTTTAAAATCAATCCCTTCACATAGATGGGGCATGTAG TCAGTATTAAAGTGATGAATTTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG30350-RA | 1373 | CG30350-RA | 44..1367 | 1..1324 | 6605 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 4713999..4715320 | 1..1322 | 6580 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 8826434..8827757 | 1..1324 | 6605 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 8827633..8828956 | 1..1324 | 6605 | 99.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 4713999..4715320 | 1..1322 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30350-RA | 1..1110 | 79..1188 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30350-RA | 1..1110 | 79..1188 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30350-RA | 1..1110 | 79..1188 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30350-RA | 1..1110 | 79..1188 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30350-RA | 1..1110 | 79..1188 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30350-RA | 44..1365 | 1..1322 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30350-RA | 44..1365 | 1..1322 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30350-RA | 44..1365 | 1..1322 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30350-RA | 44..1365 | 1..1322 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30350-RA | 44..1365 | 1..1322 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8826434..8827755 | 1..1322 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8826434..8827755 | 1..1322 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8826434..8827755 | 1..1322 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 4713939..4715260 | 1..1322 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8827633..8828954 | 1..1322 | 99 | Plus |
Translation from 78 to 1187
> GH17930.pep MADFPMCVTPSQRELAQLTEQERLTAQLKVKERKKAAKAKPKKILGGLLM VNHMKMWHQHRERIKGAISTVDAEAPNFQAARITGVNNLRDEAQTFMKRT KANIQLLVEISRTMRTHGAINPFRYDTVHAVSSIPMALLTLEKLERDNRD FGRRILEVNSEVDSGLSDKRMREGRSSTPVAPLELPPQAMAKYEAFNIPL PKSDAELRRLFRPRIYFDLYLKDARPLGRFVVQLYTEAAPLVVLQLIKSC MCNQHSKFMVKRLFPNLWLETDLMLSSDSLLHQPLEYDAKVIDHGASSYV LSFSKAYVTGFTHHLSFAISFKPLTVVNGSRVGFGRIVKGSKICECIQSY GTKNGKLSRGLLFTSCGLL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21208-PA | 375 | GF21208-PA | 33..375 | 57..369 | 596 | 36.7 | Plus |
Dana\GF13613-PA | 402 | GF13613-PA | 176..402 | 149..369 | 303 | 33.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18786-PA | 363 | GG18786-PA | 38..363 | 62..369 | 553 | 37.4 | Plus |
Dere\GG22966-PA | 404 | GG22966-PA | 178..404 | 149..369 | 304 | 33.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22509-PA | 158 | GH22509-PA | 1..158 | 212..369 | 615 | 66.5 | Plus |
Dgri\GH20999-PA | 402 | GH20999-PA | 176..402 | 149..369 | 297 | 32.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG30350-PA | 369 | CG30350-PA | 1..369 | 1..369 | 1890 | 100 | Plus |
CG15767-PA | 370 | CG15767-PA | 38..370 | 62..369 | 542 | 37.3 | Plus |
CG32236-PA | 385 | CG32236-PA | 75..385 | 48..369 | 301 | 28.3 | Plus |
CG3492-PA | 404 | CG3492-PA | 178..404 | 149..369 | 291 | 33.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20637-PA | 401 | GI20637-PA | 83..401 | 37..369 | 298 | 29.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20123-PA | 403 | GL20123-PA | 216..403 | 184..369 | 315 | 35.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15779-PB | 377 | GA15779-PB | 9..377 | 2..369 | 1266 | 64.2 | Plus |
Dpse\GA16775-PB | 397 | GA16775-PB | 67..397 | 35..369 | 407 | 33.1 | Plus |
Dpse\GA17477-PA | 403 | GA17477-PA | 216..403 | 184..369 | 315 | 35.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12437-PA | 368 | GM12437-PA | 38..368 | 62..369 | 552 | 37.8 | Plus |
Dsec\GM11860-PA | 404 | GM11860-PA | 178..404 | 149..369 | 303 | 33.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10604-PA | 369 | GD10604-PA | 1..369 | 1..369 | 1957 | 98.1 | Plus |
Dsim\GD11858-PA | 404 | GD11858-PA | 178..404 | 149..369 | 303 | 33.3 | Plus |
Dsim\GD16753-PA | 224 | GD16753-PA | 38..213 | 62..224 | 169 | 28.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21605-PA | 402 | GJ21605-PA | 195..402 | 166..369 | 291 | 34.1 | Plus |
Translation from 78 to 1187
> GH17930.hyp MADFPMCVTPSQRELAQLTEQERLTAQLKVKERKKAAKAKPKKILGGLLM VNHMKMWHQHRERIKGAISTVDAEAPNFQAARITGVNNLRDEAQTFMKRT KANIQLLVEISRTMRTHGAINPFRYDTVHAVSSIPMALLTLEKLERDNRD FGRRILEVNSEVDSGLSDKRMREGRSSTPVAPLELPPQAMAKYEAFNIPL PKSDAELRRLFRPRIYFDLYLKDARPLGRFVVQLYTEAAPLVVLQLIKSC MCNQHSKFMVKRLFPNLWLETDLMLSSDSLLHQPLEYDAKVIDHGASSYV LSFSKAYVTGFTHHLSFAISFKPLTVVNGSRVGFGRIVKGSKICECIQSY GTKNGKLSRGLLFTSCGLL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG30350-PA | 369 | CG30350-PA | 1..369 | 1..369 | 1890 | 100 | Plus |
CG15767-PA | 370 | CG15767-PA | 38..370 | 62..369 | 542 | 37.3 | Plus |
CG32236-PA | 385 | CG32236-PA | 75..385 | 48..369 | 301 | 28.3 | Plus |
CG3492-PA | 404 | CG3492-PA | 178..404 | 149..369 | 291 | 33.5 | Plus |