BDGP Sequence Production Resources |
Search the DGRC for GH17932
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 179 |
Well: | 32 |
Vector: | pOT2 |
Associated Gene/Transcript | CG3663-RA |
Protein status: | GH17932.pep: gold |
Preliminary Size: | 940 |
Sequenced Size: | 782 |
Gene | Date | Evidence |
---|---|---|
CG3663 | 2001-01-01 | Release 2 assignment |
CG3663 | 2001-10-10 | Blastp of sequenced clone |
CG3663 | 2003-01-01 | Sim4 clustering to Release 3 |
CG3663 | 2008-04-29 | Release 5.5 accounting |
CG3663 | 2008-08-15 | Release 5.9 accounting |
CG3663 | 2008-12-18 | 5.12 accounting |
782 bp (782 high quality bases) assembled on 2001-10-10
GenBank Submission: AY060731
> GH17932.complete ATTTGCAGTTTATTTAACAAGTGAACATTGCGTATTTTCTAAGCCGAATC TAGTAAATAGTGTGAAACAAAATGGCCCTGCGACGCTGTCACTTGAACCC GAAGAAAACGCTTTTCCTGTTGTGCGACATTCAAGAAAAGTTCCGACCGG CCATGCCGCTCTTTGATAACATGATCAAAAACGTCGACAAACTAACTCGG GCGGGAAAGGCTTTAGATGTTCCTCTGATTGTAACCGAACACTATCCGGA AAAACTAGGAAAAACAGTGGCCCAACTGGATGTAAGCCATGCGAAGCTGG TCTCCGGTAAAACCCTTTTCAGCATGTTTACTCCCGAAGTCAAGGCTGTG ATCAAGGATATCTTCAATGACAAGCCAGAGGATGTCGTGCTATATGGCCT CGAGTCCCACATTTGCGTGGAGCAGACCGCCATCGATCTCCTCGAGCAAA ACATCAACGTATACATAGTGGCGGACTGCTGCTCCTCCAGGCTGAACCAG GATCGAGATCTAGCCCTGGATCGCCTGCGTCAAGCGGGCTGTGTGATCAC CACTAGTGAGAGCGTTATCTTCGACTTGGTTCGAGATAAGAACAACCCCA AGTTCGATGTGGTCCGGAAATTGGTGAACCAGCCGTCGGTGGATATGGAA CTCACGCGCAACGGGAGCGGAGTGCCAGCGGGCAGTGCCAAGCTGTGAGA TAGCCCCTCCTGTCTAAATATCTGTTTGTTATAAAGCCAATTGCATTTAT AAAACCATCAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 20547945..20548301 | 403..759 | 1785 | 100 | Plus |
chr2R | 21145070 | chr2R | 20547680..20547889 | 195..404 | 1050 | 100 | Plus |
chr2R | 21145070 | chr2R | 20547416..20547609 | 1..194 | 970 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 24662053..24662410 | 403..760 | 1790 | 100 | Plus |
2R | 25286936 | 2R | 24661788..24661997 | 195..404 | 1050 | 100 | Plus |
2R | 25286936 | 2R | 24661524..24661717 | 1..194 | 970 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 24663252..24663609 | 403..760 | 1790 | 100 | Plus |
2R | 25260384 | 2R | 24662987..24663196 | 195..404 | 1050 | 100 | Plus |
2R | 25260384 | 2R | 24662723..24662916 | 1..194 | 970 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 20547416..20547609 | 1..194 | 100 | -> | Plus |
chr2R | 20547680..20547889 | 195..404 | 100 | -> | Plus |
chr2R | 20547947..20548301 | 405..759 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3663-RA | 1..627 | 72..698 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3663-RA | 1..627 | 72..698 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3663-RA | 1..627 | 72..698 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3663-RA | 1..627 | 72..698 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3663-RA | 1..627 | 72..698 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3663-RA | 1..759 | 1..759 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3663-RA | 1..759 | 1..759 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3663-RA | 22..780 | 1..759 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3663-RA | 1..759 | 1..759 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3663-RA | 22..780 | 1..759 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24661524..24661717 | 1..194 | 100 | -> | Plus |
2R | 24661788..24661997 | 195..404 | 100 | -> | Plus |
2R | 24662055..24662409 | 405..759 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24661524..24661717 | 1..194 | 100 | -> | Plus |
2R | 24661788..24661997 | 195..404 | 100 | -> | Plus |
2R | 24662055..24662409 | 405..759 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24661524..24661717 | 1..194 | 100 | -> | Plus |
2R | 24661788..24661997 | 195..404 | 100 | -> | Plus |
2R | 24662055..24662409 | 405..759 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 20549311..20549520 | 195..404 | 100 | -> | Plus |
arm_2R | 20549047..20549240 | 1..194 | 100 | -> | Plus |
arm_2R | 20549578..20549932 | 405..759 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24663005..24663214 | 195..404 | 100 | -> | Plus |
2R | 24663272..24663626 | 405..759 | 100 | Plus | |
2R | 24662741..24662934 | 1..194 | 100 | -> | Plus |
Translation from 71 to 697
> GH17932.hyp MALRRCHLNPKKTLFLLCDIQEKFRPAMPLFDNMIKNVDKLTRAGKALDV PLIVTEHYPEKLGKTVAQLDVSHAKLVSGKTLFSMFTPEVKAVIKDIFND KPEDVVLYGLESHICVEQTAIDLLEQNINVYIVADCCSSRLNQDRDLALD RLRQAGCVITTSESVIFDLVRDKNNPKFDVVRKLVNQPSVDMELTRNGSG VPAGSAKL*
Translation from 71 to 697
> GH17932.pep MALRRCHLNPKKTLFLLCDIQEKFRPAMPLFDNMIKNVDKLTRAGKALDV PLIVTEHYPEKLGKTVAQLDVSHAKLVSGKTLFSMFTPEVKAVIKDIFND KPEDVVLYGLESHICVEQTAIDLLEQNINVYIVADCCSSRLNQDRDLALD RLRQAGCVITTSESVIFDLVRDKNNPKFDVVRKLVNQPSVDMELTRNGSG VPAGSAKL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12999-PA | 208 | GF12999-PA | 1..208 | 1..208 | 1006 | 90.9 | Plus |
Dana\GF17786-PA | 205 | GF17786-PA | 9..203 | 8..202 | 624 | 60.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22997-PA | 208 | GG22997-PA | 1..208 | 1..208 | 1047 | 94.2 | Plus |
Dere\GG11809-PA | 204 | GG11809-PA | 11..200 | 7..196 | 599 | 58.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20327-PA | 201 | GH20327-PA | 1..197 | 1..197 | 905 | 84.8 | Plus |
Dgri\GH19318-PA | 183 | GH19318-PA | 1..173 | 16..194 | 540 | 56.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3663-PA | 208 | CG3663-PA | 1..208 | 1..208 | 1065 | 100 | Plus |
CG11333-PA | 204 | CG11333-PA | 12..200 | 8..196 | 583 | 58.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19998-PA | 201 | GI19998-PA | 1..197 | 1..197 | 900 | 84.3 | Plus |
Dmoj\GI22207-PA | 209 | GI22207-PA | 12..206 | 8..207 | 612 | 56 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11107-PA | 187 | GL11107-PA | 1..187 | 1..208 | 842 | 79.3 | Plus |
Dper\GL27251-PA | 207 | GL27251-PA | 11..200 | 7..196 | 579 | 56.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17597-PA | 208 | GA17597-PA | 1..208 | 1..208 | 998 | 90.4 | Plus |
Dpse\GA10927-PA | 207 | GA10927-PA | 11..200 | 7..196 | 578 | 56.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11891-PA | 208 | GM11891-PA | 1..208 | 1..208 | 1079 | 98.1 | Plus |
Dsec\GM12943-PA | 204 | GM12943-PA | 8..200 | 2..196 | 594 | 57.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11889-PA | 333 | GD11889-PA | 1..180 | 1..180 | 952 | 100 | Plus |
Dsim\GD21579-PA | 204 | GD21579-PA | 11..200 | 7..196 | 600 | 58.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21248-PA | 201 | GJ21248-PA | 1..199 | 1..199 | 935 | 87.4 | Plus |
Dvir\GJ24328-PA | 209 | GJ24328-PA | 12..200 | 8..196 | 596 | 57.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21424-PA | 205 | GK21424-PA | 1..202 | 1..201 | 943 | 87.6 | Plus |