BDGP Sequence Production Resources |
Search the DGRC for GH17960
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 179 |
Well: | 60 |
Vector: | pOT2 |
Associated Gene/Transcript | GstZ2-RA |
Protein status: | GH17960.pep: gold |
Preliminary Size: | 1178 |
Sequenced Size: | 1057 |
Gene | Date | Evidence |
---|---|---|
CG9363 | 2001-01-01 | Release 2 assignment |
CG9363 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9363 | 2003-01-15 | Blastp of sequenced clone |
CG9363 | 2008-04-29 | Release 5.5 accounting |
CG9363 | 2008-08-15 | Release 5.9 accounting |
CG9363 | 2008-12-18 | 5.12 accounting |
1057 bp (1057 high quality bases) assembled on 2003-01-15
GenBank Submission: AY060732
> GH17960.complete AAAATGTCTACTAATCTCTGTCCCAATGCTTCCTCCTCCGACATACAGCC AATACTCTACTCGTATTGGCGCAGCTCGTGCTCCTGGCGCGTGCGCATTG CGATGAACCTGAAGGAGATACCCTACGACATCAAGCCGATCAGCCTGATC AAATCCGGTGGCGAGCAGCACTGCAATGAGTACCGCGAGGTGAATCCAAT GGAGCAGGTGCCCGCCCTACAGATTGATGGACACACCCTCATCGAATCGG TAGCCATAATGCACTACCTGGAGGAAACACGTCCCCAGCGACCACTCCTG CCACAGGACGTCCACAAGCGGGCCAAGGTGCGCGAAATAGTCGAGATCAT TTGCTCTGGCATCCAGCCCCTGCAGAACCTCATCGTGCTCATCCATGTGG GCGAGGAGAAGAAGAAGGAGTGGGCCCAGCACTGGATTACACGAGGCTTC CGGGCGGTTGAGAAGGCGCTGTCCACTTCGGCCGGCAAATATTGCGTGGG CGATGAGATCTCCATGGCGGACTGCTGCCTCGTACCTCAGGTGTTCAATG CCCGAAGATTCCACGTCGACTTGCGACCGTATCCCATAATTCTGCGCATC GATCGCGAACTGGAGAGCAATCCGGCATTCCGGGCGGCCCATCCCTCCAA TCAACCGGACTGTCCGCCGGAGCTGCCCAACAAATAGAATTTTCCGACCC CAACTGCAAAGCGCCGTAAGACGAAAAAGTGAATTGCAGTTCGTAAACCA GGCACAAGACAAACTAAGAACTTAAATCTGATCGGTGGGCACGTGGATGG CGATGGCGATGGAGAATGGATTGGATAGGATGGCAAAGCTGGCGAGGATT CCATTAAGCAGAAACAGTCGGATGTGATTTAAGAAATTGCTAACAGCATT TAAATATGCATAAATGCATAAAAATACTATCGATAACATAACGAAATTCC TCACACGAAATTCAAACGCAAACGCAAACGCAAAATTCTCAGAAAACGGA ACAAAAAATCGTATAATAAATTCTTCAAATTCCCTTAAAAAAAAAAAAAA AAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 5283492..5283972 | 1036..556 | 2405 | 100 | Minus |
chr3R | 27901430 | chr3R | 5284048..5284379 | 557..226 | 1660 | 100 | Minus |
chr3R | 27901430 | chr3R | 5284440..5284665 | 226..1 | 1130 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 9457646..9458127 | 1037..556 | 2410 | 100 | Minus |
3R | 32079331 | 3R | 9458203..9458534 | 557..226 | 1660 | 100 | Minus |
3R | 32079331 | 3R | 9458595..9458820 | 226..1 | 1130 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 9198477..9198958 | 1037..556 | 2410 | 100 | Minus |
3R | 31820162 | 3R | 9199034..9199365 | 557..226 | 1660 | 100 | Minus |
3R | 31820162 | 3R | 9199426..9199651 | 226..1 | 1130 | 100 | Minus |
3R | 31820162 | 3R | 9196617..9196748 | 552..421 | 165 | 75 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 5283492..5283970 | 558..1036 | 100 | <- | Minus |
chr3R | 5284048..5284378 | 227..557 | 100 | <- | Minus |
chr3R | 5284440..5284665 | 1..226 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9363-RA | 1..684 | 4..687 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9363-RA | 1..684 | 4..687 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
GstZ2-RA | 1..684 | 4..687 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9363-RA | 1..684 | 4..687 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
GstZ2-RA | 1..684 | 4..687 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9363-RA | 24..1059 | 1..1036 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9363-RA | 24..1059 | 1..1036 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
GstZ2-RA | 27..1062 | 1..1036 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9363-RA | 24..1059 | 1..1036 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
GstZ2-RA | 27..1062 | 1..1036 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9457647..9458125 | 558..1036 | 100 | <- | Minus |
3R | 9458203..9458533 | 227..557 | 100 | <- | Minus |
3R | 9458595..9458820 | 1..226 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9457647..9458125 | 558..1036 | 100 | <- | Minus |
3R | 9458203..9458533 | 227..557 | 100 | <- | Minus |
3R | 9458595..9458820 | 1..226 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9457647..9458125 | 558..1036 | 100 | <- | Minus |
3R | 9458203..9458533 | 227..557 | 100 | <- | Minus |
3R | 9458595..9458820 | 1..226 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 5284317..5284542 | 1..226 | 100 | Minus | |
arm_3R | 5283369..5283847 | 558..1036 | 100 | <- | Minus |
arm_3R | 5283925..5284255 | 227..557 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9198478..9198956 | 558..1036 | 100 | <- | Minus |
3R | 9199034..9199364 | 227..557 | 100 | <- | Minus |
3R | 9199426..9199651 | 1..226 | 100 | Minus |
Translation from 0 to 686
> GH17960.hyp KMSTNLCPNASSSDIQPILYSYWRSSCSWRVRIAMNLKEIPYDIKPISLI KSGGEQHCNEYREVNPMEQVPALQIDGHTLIESVAIMHYLEETRPQRPLL PQDVHKRAKVREIVEIICSGIQPLQNLIVLIHVGEEKKKEWAQHWITRGF RAVEKALSTSAGKYCVGDEISMADCCLVPQVFNARRFHVDLRPYPIILRI DRELESNPAFRAAHPSNQPDCPPELPNK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
GstZ2-PA | 227 | CG9363-PA | 1..227 | 2..228 | 1214 | 100 | Plus |
GstZ2-PB | 220 | CG9363-PB | 4..220 | 12..228 | 1139 | 98.2 | Plus |
GstZ2-PC | 215 | CG9363-PC | 4..215 | 17..228 | 1137 | 100 | Plus |
GstZ1-PA | 246 | CG9362-PA | 33..246 | 16..228 | 790 | 66.8 | Plus |
gfzf-PD | 234 | CG33546-PD | 3..181 | 19..197 | 147 | 25.5 | Plus |
Translation from 3 to 686
> GH17960.pep MSTNLCPNASSSDIQPILYSYWRSSCSWRVRIAMNLKEIPYDIKPISLIK SGGEQHCNEYREVNPMEQVPALQIDGHTLIESVAIMHYLEETRPQRPLLP QDVHKRAKVREIVEIICSGIQPLQNLIVLIHVGEEKKKEWAQHWITRGFR AVEKALSTSAGKYCVGDEISMADCCLVPQVFNARRFHVDLRPYPIILRID RELESNPAFRAAHPSNQPDCPPELPNK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17762-PA | 220 | GF17762-PA | 4..220 | 11..227 | 1136 | 98.2 | Plus |
Dana\GF17763-PA | 250 | GF17763-PA | 23..249 | 2..227 | 719 | 58.6 | Plus |
Dana\GF12161-PA | 223 | GF12161-PA | 7..200 | 17..210 | 149 | 27.9 | Plus |
Dana\GF12160-PA | 223 | GF12160-PA | 7..206 | 17..216 | 147 | 28 | Plus |
Dana\GF17320-PA | 1018 | GF17320-PA | 782..970 | 14..198 | 147 | 24.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17371-PA | 220 | GG17371-PA | 4..220 | 11..227 | 1136 | 98.2 | Plus |
Dere\GG17372-PA | 246 | GG17372-PA | 25..246 | 7..227 | 776 | 63.5 | Plus |
Dere\GG10036-PA | 1042 | GG10036-PA | 814..994 | 18..198 | 165 | 26.3 | Plus |
Dere\GG21881-PA | 223 | GG21881-PA | 2..180 | 10..192 | 151 | 30.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19138-PA | 220 | GH19138-PA | 4..220 | 11..227 | 1134 | 97.7 | Plus |
Dgri\GH19140-PA | 247 | GH19140-PA | 23..242 | 10..227 | 760 | 63.2 | Plus |
Dgri\GH19139-PA | 218 | GH19139-PA | 13..214 | 10..219 | 731 | 66.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
GstZ2-PA | 227 | CG9363-PA | 1..227 | 1..227 | 1214 | 100 | Plus |
GstZ2-PB | 220 | CG9363-PB | 4..220 | 11..227 | 1139 | 98.2 | Plus |
GstZ2-PC | 215 | CG9363-PC | 4..215 | 16..227 | 1137 | 100 | Plus |
GstZ1-PA | 246 | CG9362-PA | 33..246 | 15..227 | 790 | 66.8 | Plus |
gfzf-PD | 234 | CG33546-PD | 3..181 | 18..196 | 147 | 25.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23596-PA | 220 | GI23596-PA | 4..220 | 11..227 | 1134 | 97.7 | Plus |
Dmoj\GI23597-PA | 246 | GI23597-PA | 31..246 | 13..227 | 793 | 68.7 | Plus |
Dmoj\GI20133-PA | 225 | GI20133-PA | 8..205 | 15..211 | 141 | 24.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13668-PA | 240 | GL13668-PA | 4..240 | 11..227 | 1107 | 89.9 | Plus |
Dper\GL13669-PA | 256 | GL13669-PA | 43..256 | 15..227 | 801 | 67.9 | Plus |
Dper\GL12196-PA | 1039 | GL12196-PA | 810..989 | 18..196 | 149 | 25.9 | Plus |
Dper\GL15503-PA | 241 | GL15503-PA | 35..197 | 29..186 | 145 | 28.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21732-PA | 220 | GA21732-PA | 4..220 | 11..227 | 1136 | 98.2 | Plus |
Dpse\GA21731-PA | 231 | GA21731-PA | 18..231 | 15..227 | 799 | 67.3 | Plus |
Dpse\GA26222-PB | 232 | GA26222-PB | 3..182 | 18..196 | 156 | 25.9 | Plus |
Dpse\GA26222-PA | 1039 | GA26222-PA | 810..989 | 18..196 | 151 | 25.9 | Plus |
Dpse\GA23844-PA | 241 | GA23844-PA | 35..197 | 29..186 | 143 | 27.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26256-PA | 220 | GM26256-PA | 4..220 | 11..227 | 1136 | 98.2 | Plus |
Dsec\GM26257-PA | 246 | GM26257-PA | 33..246 | 15..227 | 790 | 66.8 | Plus |
Dsec\GM10504-PA | 265 | GM10504-PA | 35..213 | 18..196 | 169 | 27.1 | Plus |
Dsec\GM21880-PA | 222 | GM21880-PA | 18..202 | 30..213 | 143 | 26.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20795-PA | 220 | GD20795-PA | 4..220 | 11..227 | 1136 | 98.2 | Plus |
Dsim\GD20796-PA | 246 | GD20796-PA | 33..246 | 15..227 | 800 | 67.8 | Plus |
Dsim\GD19500-PA | 1038 | GD19500-PA | 808..986 | 18..196 | 168 | 27.2 | Plus |
Dsim\GD11374-PA | 222 | GD11374-PA | 18..202 | 30..213 | 147 | 26.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23570-PA | 220 | GJ23570-PA | 4..220 | 11..227 | 1134 | 97.7 | Plus |
Dvir\GJ23571-PA | 162 | GJ23571-PA | 1..162 | 66..227 | 672 | 75.3 | Plus |
Dvir\GJ19903-PA | 228 | GJ19903-PA | 2..205 | 8..210 | 152 | 23.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12126-PA | 220 | GK12126-PA | 4..220 | 11..227 | 1136 | 98.2 | Plus |
Dwil\GK12127-PA | 246 | GK12127-PA | 12..243 | 1..223 | 722 | 57.3 | Plus |
Dwil\GK12738-PA | 1061 | GK12738-PA | 832..1012 | 18..198 | 162 | 25.3 | Plus |
Dwil\GK23004-PA | 226 | GK23004-PA | 4..201 | 15..210 | 147 | 23.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24775-PA | 220 | GE24775-PA | 4..220 | 11..227 | 1136 | 98.2 | Plus |
Dyak\GE24777-PA | 246 | GE24777-PA | 25..246 | 7..227 | 790 | 64.4 | Plus |
Dyak\GE25813-PA | 1042 | GE25813-PA | 814..992 | 18..196 | 165 | 27.2 | Plus |
Dyak\GE11962-PA | 222 | GE11962-PA | 18..205 | 30..216 | 148 | 27.7 | Plus |