BDGP Sequence Production Resources |
Search the DGRC for GH18014
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 180 |
Well: | 14 |
Vector: | pOT2 |
Associated Gene/Transcript | Drat-RC |
Protein status: | GH18014.pep: gold |
Preliminary Size: | 1984 |
Sequenced Size: | 1928 |
Gene | Date | Evidence |
---|---|---|
CG1600 | 2001-01-01 | Release 2 assignment |
CG1600 | 2001-07-04 | Blastp of sequenced clone |
CG1600 | 2008-04-29 | Release 5.5 accounting |
CG1600 | 2008-08-15 | Release 5.9 accounting |
CG1600 | 2008-12-18 | 5.12 accounting |
1928 bp (1928 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051525
> GH18014.complete TCAAGTCGTCGGAAAAGCGCCGAGAAGCAATTGCAGCTAAAGAAAAATCT AGCCAATTCACAAGTAAAAGTGTTAGTCAGTTTGTATAATAAATACACAA CGCAGTTGAGTTGCAGTAGTGCAAAAAAACAAAAAAAAAAAAAAAGTGAA AAAATTAACAGAGAACAATTACGAGGACAGCAAAATGCCGGTCGATATAT GCAGTCAACCGCACAATTTGCTCAGTTCAATGAGTGGAACAACAGATACC TCGTTGTCGCTGAACTCATTGTCCCTGACTTCCGTTCTGCCGCCAACGGA TCCCGATCACCATAATCCACACAGTACACACAGTACGCACAACATGAACA AGCTGTGCCGCCAAGTGTCAATTGAGTCGCCCGGTCCGGGCGCCAAGAAC TGCGTCTTCAACTTCTTCGTGCCCATCGAGGACACGCCGGCGTTGGGCGC CCGCATCCGGATCGTTTGCGCCGGAGCCTGCTATCGTCGTCGCGATCGCG CCAACTCCATCACCAGCATGTCCTCAGTGTCCTCGGAGCTGAGCGACTAC TGTCCGTCGGTGAACTCGATGTCCTCGCCCGCACACCAGGGCATCCGGGA GGGCTCCTTCTTTCCCGGCTTCGAGGTGGCCGGCGTCATCGAGTCCCTGG GCTCGGAGATCACCGAGGCCAACAACCGTGGCCTGCGCATTGGACAGCGC GTGATCGTCTATCCGTTCGATGAGACCCCAGCCGGCTATGCCGAGCTGCT GGTCGTGCCGGACCTGAAGCACGTGGTGCCCATTCCCGACAGTCTGCCCA TGGAGGTGGCCGCCATGCTGCCGACGGGCGCCCTGCTCGCCTGGAATGCC GTCTTCAAGGCTCAGGCCGTTGTCACACAGATTCTCAGCCAGCGGGCTGC CACGGAGCCGAAGCGGAAGCCCAAGATCCTCATCGTGGGCACTGGCGGCC TGGCACTCTGGGCCGTGCGCATCGCCTCCTATCACTTTGCCACAACTGGA GCCGACAACGTGGACATCACAGTGGCCAGTCTGCGGGACGAGGGCTTCCG CCTGGCCACAGAAATCAAAAATGTCAGCGTGGTCCAGTGGAACGAATGCC TGTACGAGCCGCAGCTGATCGAGCGCACCAAGGACGTGTGCGGCGGAGCC GTGGACGTGGTCATTGACTTTGGCACAACCTCCAGGAGTCTGCACCGCTC GATGCACTGCTTGTCGAAGGGCGGCGTTGTGCTGATCAGCGACGAGGTGG CCGAGAAGCTGCTGCCCAAGTTCTCGCGCCTGTCGGAGCAGTACCAGCAG GAGATCATCGCCATCTCGAACGGCACCGCCGAGCAGCTGGCTGAGCTGGT GGAGCTGGTAGCCAACAAGAAGATCGAGCCGCCGCCGCACTCCGTCTTCC CCTGCGAGCAGGCGGCCGAGGTCATCGCCAAGCTGTGCAACTCCGAGATA CCCGGACGCGCCATCCTCCGTTTCCACGACATTGAGTAGGCGTGGAGGAG GATATGGTTCCCCATCAAGGCATTAACTCATTTAATATGGATATCTGTTA GCTGTATTCGGAAGACAACCGACAAAACCGACAAAACAACCTGCAACCTG CGACACTCTCGAAGCGGATTCAGAAATGTGCTTATTTTGTAGCCGGTCAT TGTTTTGTAACCTTAATTTTGGACTGCAGACGAACTCCTCGTTTTAATTG ATTTAGCGTTTTAGGCATTTTTAGTATTATGTACATATAGATTGTGATTT ATTTTATTTGTAAGCCACCACCATGATTCTACTTTTGCAAAGTCACCCAT CACATCGCCATATTAGCCGGAGTCAAAATTCGGCGGCTTCTTCAATGATT TTCGATTAAGCAAAAAGCCCAGCAGAAGCGGATTACAAAATAAATGTTAT ACATACTATAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1600-RC | 2203 | CG1600-RC | 89..1998 | 1..1910 | 9550 | 100 | Plus |
CG1600-RA | 2212 | CG1600-RA | 364..2041 | 233..1910 | 8390 | 100 | Plus |
CG1600-RB | 1863 | CG1600-RB | 72..1747 | 235..1910 | 8380 | 100 | Plus |
CG1600-RB | 1863 | CG1600-RB | 1..71 | 1..71 | 355 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 3413585..3414422 | 1909..1072 | 4190 | 100 | Minus |
chr2R | 21145070 | chr2R | 3414490..3415325 | 1071..236 | 4180 | 100 | Minus |
chr2R | 21145070 | chr2R | 3416378..3416611 | 234..1 | 1170 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 7526234..7527072 | 1910..1072 | 4195 | 100 | Minus |
2R | 25286936 | 2R | 7527140..7527978 | 1071..233 | 4195 | 100 | Minus |
2R | 25286936 | 2R | 7529028..7529261 | 234..1 | 1170 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 7528339..7529177 | 1071..233 | 4195 | 100 | Minus |
2R | 25260384 | 2R | 7527433..7528271 | 1910..1072 | 4195 | 100 | Minus |
2R | 25260384 | 2R | 7530227..7530460 | 234..1 | 1170 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\Uvir | 6564 | Dvir\Uvir VIRUVIR 6564bp | 150..207 | 1764..1709 | 114 | 69 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 3413585..3414422 | 1072..1909 | 100 | <- | Minus |
chr2R | 3414490..3415326 | 235..1071 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1600-RC | 1..1305 | 185..1489 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1600-RC | 1..1305 | 185..1489 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Drat-RC | 1..1305 | 185..1489 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1600-RC | 1..1305 | 185..1489 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Drat-RC | 1..1305 | 185..1489 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1600-RC | 25..1933 | 1..1909 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1600-RC | 25..1933 | 1..1909 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Drat-RC | 30..1938 | 1..1909 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1600-RC | 25..1933 | 1..1909 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Drat-RC | 30..1938 | 1..1909 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7529028..7529261 | 1..234 | 100 | Minus | |
2R | 7527140..7527976 | 235..1071 | 100 | <- | Minus |
2R | 7526235..7527072 | 1072..1909 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7529028..7529261 | 1..234 | 100 | Minus | |
2R | 7527140..7527976 | 235..1071 | 100 | <- | Minus |
2R | 7526235..7527072 | 1072..1909 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7529028..7529261 | 1..234 | 100 | Minus | |
2R | 7527140..7527976 | 235..1071 | 100 | <- | Minus |
2R | 7526235..7527072 | 1072..1909 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 3413740..3414577 | 1072..1909 | 100 | <- | Minus |
arm_2R | 3414645..3415481 | 235..1071 | 100 | <- | Minus |
arm_2R | 3416533..3416766 | 1..234 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7530227..7530460 | 1..234 | 100 | Minus | |
2R | 7527434..7528271 | 1072..1909 | 100 | <- | Minus |
2R | 7528339..7529175 | 235..1071 | 100 | <- | Minus |
Translation from 184 to 1488
> GH18014.pep MPVDICSQPHNLLSSMSGTTDTSLSLNSLSLTSVLPPTDPDHHNPHSTHS THNMNKLCRQVSIESPGPGAKNCVFNFFVPIEDTPALGARIRIVCAGACY RRRDRANSITSMSSVSSELSDYCPSVNSMSSPAHQGIREGSFFPGFEVAG VIESLGSEITEANNRGLRIGQRVIVYPFDETPAGYAELLVVPDLKHVVPI PDSLPMEVAAMLPTGALLAWNAVFKAQAVVTQILSQRAATEPKRKPKILI VGTGGLALWAVRIASYHFATTGADNVDITVASLRDEGFRLATEIKNVSVV QWNECLYEPQLIERTKDVCGGAVDVVIDFGTTSRSLHRSMHCLSKGGVVL ISDEVAEKLLPKFSRLSEQYQQEIIAISNGTAEQLAELVELVANKKIEPP PHSVFPCEQAAEVIAKLCNSEIPGRAILRFHDIE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11713-PA | 434 | GF11713-PA | 1..434 | 1..434 | 2024 | 94.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10734-PA | 429 | GG10734-PA | 1..429 | 1..434 | 2190 | 96.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19809-PA | 432 | GH19809-PA | 1..432 | 1..434 | 1724 | 81.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Drat-PC | 434 | CG1600-PC | 1..434 | 1..434 | 2235 | 100 | Plus |
Drat-PD | 381 | CG1600-PD | 1..381 | 54..434 | 1948 | 100 | Plus |
Drat-PB | 381 | CG1600-PB | 1..381 | 54..434 | 1948 | 100 | Plus |
Drat-PA | 381 | CG1600-PA | 1..381 | 54..434 | 1948 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19095-PA | 429 | GI19095-PA | 1..429 | 1..434 | 1986 | 88.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20107-PA | 410 | GL20107-PA | 1..410 | 1..434 | 1850 | 88 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14040-PA | 428 | GA14040-PA | 1..428 | 1..434 | 1964 | 91.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20780-PA | 431 | GM20780-PA | 1..431 | 1..434 | 2269 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10242-PA | 381 | GD10242-PA | 1..381 | 54..434 | 2019 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20069-PA | 434 | GJ20069-PA | 1..434 | 1..434 | 1837 | 87.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10697-PA | 435 | GK10697-PA | 1..435 | 1..434 | 1841 | 86 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23849-PA | 428 | GE23849-PA | 1..428 | 1..434 | 2240 | 97.2 | Plus |
Translation from 184 to 1488
> GH18014.hyp MPVDICSQPHNLLSSMSGTTDTSLSLNSLSLTSVLPPTDPDHHNPHSTHS THNMNKLCRQVSIESPGPGAKNCVFNFFVPIEDTPALGARIRIVCAGACY RRRDRANSITSMSSVSSELSDYCPSVNSMSSPAHQGIREGSFFPGFEVAG VIESLGSEITEANNRGLRIGQRVIVYPFDETPAGYAELLVVPDLKHVVPI PDSLPMEVAAMLPTGALLAWNAVFKAQAVVTQILSQRAATEPKRKPKILI VGTGGLALWAVRIASYHFATTGADNVDITVASLRDEGFRLATEIKNVSVV QWNECLYEPQLIERTKDVCGGAVDVVIDFGTTSRSLHRSMHCLSKGGVVL ISDEVAEKLLPKFSRLSEQYQQEIIAISNGTAEQLAELVELVANKKIEPP PHSVFPCEQAAEVIAKLCNSEIPGRAILRFHDIE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Drat-PC | 434 | CG1600-PC | 1..434 | 1..434 | 2235 | 100 | Plus |
Drat-PD | 381 | CG1600-PD | 1..381 | 54..434 | 1948 | 100 | Plus |
Drat-PB | 381 | CG1600-PB | 1..381 | 54..434 | 1948 | 100 | Plus |
Drat-PA | 381 | CG1600-PA | 1..381 | 54..434 | 1948 | 100 | Plus |