BDGP Sequence Production Resources |
Search the DGRC for GH18016
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 180 |
Well: | 16 |
Vector: | pOT2 |
Associated Gene/Transcript | CG3492-RA |
Protein status: | GH18016.pep: gold |
Preliminary Size: | 1586 |
Sequenced Size: | 1535 |
Gene | Date | Evidence |
---|---|---|
CG3492 | 2001-01-01 | Release 2 assignment |
CG3492 | 2001-07-04 | Blastp of sequenced clone |
CG3492 | 2003-01-01 | Sim4 clustering to Release 3 |
CG3492 | 2008-04-29 | Release 5.5 accounting |
CG3492 | 2008-08-15 | Release 5.9 accounting |
CG3492 | 2008-12-18 | 5.12 accounting |
1535 bp (1535 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051526
> GH18016.complete TTCGACCCATCCCCTCCAAATCCAATCAGTCAAACATTTCTTACCACACA CGTACAACCCGAACCCCGCTTAGTCATTTCAAATTCAAGTATATAGACTA CATTGATTTTGGAAGAGTTAGCCACAATGTTCATCCGCGGAGATGCGCCA CAAGCTTCCCGGGGCAAAATTCCCCAGATCCCCAGCTCCATGACGCCCTA TGTGGCGGCAGTGAAGCGCGGACCCTACACAATGACCAATCCGGTGTACA ACACCCACAATCCCAACCTGGTGGGCTTGGATGGCCAGGTGGAGGATTCC CGGCCCAAGCACACCTTTAATGTGAAGAGGCAAGAGCTGGAGAATAACTA CCGGCACCACCAGCGGCTGATCCCCGTGCCCACTTCCCGGAGGACGATGC CCAAGATCCGATCCCACATAGTGATGAACGAGCAGCGGGAGCTGTATCGC CAGCACCGCGATCGAATGTCCAACATCAAGGGCAAGGTCAACACCTATCT GCCGCCCCCGAAGGTGCAGATCGAGGGAAATGGCATGGAGCTCTCCTACA TGGAGATGCTGACCGCACTCTACAAGAAGAGCAACAACACGCTGCGGACC TTCACCAAGTCGCCGGAGCGCCTGGCAGCCGGCAGGTGGCGCAATGCCAA CTTGGCCCGGGAGAAGGAGCGCCGCCAACTGGAGAAGAACAAGGAGTTCC ACAAGGGAGGCGAGCTGTTTGACCCAGAGGCGGGCAAGTCAAAGCGGTAC AAGCCCAAGTCCTCGGGCTCCTTCAGCTGCGAGATTCCCATGCACGTGCT CCATCGCTACGAGAACTTGATGGACCAATGCGACGTGGGCGTTCTGTGCA AGCTGCTGCGTCCGCAGATCTACCTGGACATCGAGGTGCGGGAAGCCCGC ATCCAGGGCAGGCTGATCATCCAGCTCTTCACCGAGGCCTGTCCGCAGGT GGTGCTGGAGTTCATGAGGATCTGCACCCAGAACAACAGTAGCGCCATCG TATTCAACCGCGCCCTGGCGCCCATTTGGATGGAGGGACGACTGGCCATG GATCCGCAGAGAAGCACCGAGCTGACCAACATCGAGCACGACTTCGAGGT GCTGAACCACGGAGTGGACGCCGGAATCCTCTCCTTTCCCAGTCGCTATG TCAGGGGAAACGCCCGGACTGCCGTCAACTTCACCATCAGCTTTAAGCCC CTGTCCATTCTCAACGGCAGGAGAATCGCCTTCGGGAAGGTTCGCAAGGG CATGCAGCTCCTGGAGAGGATTCAGGTGGCCGTCGGACACCTGCCCATGA GCCACAACTTGATCTCGCTGACGGACTGTGGAGTGATCTGAGAGGTGTAA AATTTCCAGTAGATAGTTGGGATCTACTCATAACTTTTCGAAGAAAATTA ATTAGGATCAATTGCTAGGCGGAAATCTATATTCTTATTCTTAAGCCATG TCACCCCACTTAAAGCTGCTGTAAACCACAAGTAAATGATTAATGTGCAT AGATACATAGATACGAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3492-RA | 1522 | CG3492-RA | 1..1516 | 1..1516 | 7580 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 20358595..20360109 | 1..1515 | 7470 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 24472712..24474227 | 1..1516 | 7580 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 24473911..24475426 | 1..1516 | 7580 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 20358595..20360109 | 1..1515 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3492-RA | 1..1215 | 127..1341 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3492-RA | 1..1215 | 127..1341 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3492-RA | 1..1215 | 127..1341 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3492-RA | 1..1215 | 127..1341 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3492-RA | 1..1215 | 127..1341 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3492-RA | 1..1515 | 1..1515 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3492-RA | 1..1515 | 1..1515 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3492-RA | 1..1515 | 1..1515 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3492-RA | 1..1515 | 1..1515 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3492-RA | 1..1515 | 1..1515 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24472712..24474226 | 1..1515 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24472712..24474226 | 1..1515 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24472712..24474226 | 1..1515 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 20360235..20361749 | 1..1515 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24473929..24475443 | 1..1515 | 100 | Plus |
Translation from 126 to 1340
> GH18016.pep MFIRGDAPQASRGKIPQIPSSMTPYVAAVKRGPYTMTNPVYNTHNPNLVG LDGQVEDSRPKHTFNVKRQELENNYRHHQRLIPVPTSRRTMPKIRSHIVM NEQRELYRQHRDRMSNIKGKVNTYLPPPKVQIEGNGMELSYMEMLTALYK KSNNTLRTFTKSPERLAAGRWRNANLAREKERRQLEKNKEFHKGGELFDP EAGKSKRYKPKSSGSFSCEIPMHVLHRYENLMDQCDVGVLCKLLRPQIYL DIEVREARIQGRLIIQLFTEACPQVVLEFMRICTQNNSSAIVFNRALAPI WMEGRLAMDPQRSTELTNIEHDFEVLNHGVDAGILSFPSRYVRGNARTAV NFTISFKPLSILNGRRIAFGKVRKGMQLLERIQVAVGHLPMSHNLISLTD CGVI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13613-PA | 402 | GF13613-PA | 1..402 | 1..404 | 1838 | 82.4 | Plus |
Dana\GF21208-PA | 375 | GF21208-PA | 202..354 | 240..383 | 245 | 37.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22966-PA | 404 | GG22966-PA | 1..404 | 1..404 | 2085 | 94.1 | Plus |
Dere\GG18786-PA | 363 | GG18786-PA | 191..342 | 240..383 | 228 | 34.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20999-PA | 402 | GH20999-PA | 1..402 | 1..404 | 1432 | 66.2 | Plus |
Dgri\GH22509-PA | 158 | GH22509-PA | 1..158 | 245..404 | 274 | 37.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3492-PA | 404 | CG3492-PA | 1..404 | 1..404 | 2115 | 100 | Plus |
CG30350-PA | 369 | CG30350-PA | 149..369 | 178..404 | 291 | 33.5 | Plus |
CG15767-PA | 370 | CG15767-PA | 198..349 | 240..383 | 234 | 35.5 | Plus |
CG32236-PA | 385 | CG32236-PA | 225..385 | 243..404 | 215 | 34.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20637-PA | 401 | GI20637-PA | 1..401 | 1..404 | 1430 | 65.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20123-PA | 403 | GL20123-PA | 1..403 | 1..404 | 1509 | 67.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17477-PA | 403 | GA17477-PA | 1..403 | 1..404 | 1509 | 67.7 | Plus |
Dpse\GA15779-PB | 377 | GA15779-PB | 181..377 | 208..404 | 288 | 33.8 | Plus |
Dpse\GA16775-PB | 397 | GA16775-PB | 237..397 | 243..404 | 253 | 34.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11860-PA | 404 | GM11860-PA | 1..404 | 1..404 | 2147 | 98.5 | Plus |
Dsec\GM12437-PA | 368 | GM12437-PA | 196..348 | 240..384 | 237 | 35.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11858-PA | 404 | GD11858-PA | 1..404 | 1..404 | 2143 | 98.3 | Plus |
Dsim\GD10604-PA | 369 | GD10604-PA | 149..369 | 178..404 | 302 | 32.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21605-PA | 402 | GJ21605-PA | 1..402 | 1..404 | 1495 | 68.7 | Plus |
Translation from 126 to 1340
> GH18016.hyp MFIRGDAPQASRGKIPQIPSSMTPYVAAVKRGPYTMTNPVYNTHNPNLVG LDGQVEDSRPKHTFNVKRQELENNYRHHQRLIPVPTSRRTMPKIRSHIVM NEQRELYRQHRDRMSNIKGKVNTYLPPPKVQIEGNGMELSYMEMLTALYK KSNNTLRTFTKSPERLAAGRWRNANLAREKERRQLEKNKEFHKGGELFDP EAGKSKRYKPKSSGSFSCEIPMHVLHRYENLMDQCDVGVLCKLLRPQIYL DIEVREARIQGRLIIQLFTEACPQVVLEFMRICTQNNSSAIVFNRALAPI WMEGRLAMDPQRSTELTNIEHDFEVLNHGVDAGILSFPSRYVRGNARTAV NFTISFKPLSILNGRRIAFGKVRKGMQLLERIQVAVGHLPMSHNLISLTD CGVI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3492-PA | 404 | CG3492-PA | 1..404 | 1..404 | 2115 | 100 | Plus |
CG30350-PA | 369 | CG30350-PA | 149..369 | 178..404 | 291 | 33.5 | Plus |
CG15767-PA | 370 | CG15767-PA | 198..349 | 240..383 | 234 | 35.5 | Plus |
CG32236-PA | 385 | CG32236-PA | 225..385 | 243..404 | 215 | 34.8 | Plus |