BDGP Sequence Production Resources |
Search the DGRC for GH18028
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 180 |
Well: | 28 |
Vector: | pOT2 |
Associated Gene/Transcript | CG3835-RA |
Protein status: | GH18028.pep: gold |
Preliminary Size: | 1937 |
Sequenced Size: | 1951 |
Gene | Date | Evidence |
---|---|---|
CG3835 | 2001-07-04 | Blastp of sequenced clone |
CG3835 | 2003-01-01 | Sim4 clustering to Release 3 |
CG3835 | 2008-04-29 | Release 5.5 accounting |
CG3835 | 2008-08-15 | Release 5.9 accounting |
CG3835 | 2008-12-18 | 5.12 accounting |
1951 bp (1951 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051527
> GH18028.complete GTGAGGAGAAGATTGCGTCCACACCCCCCTCGAGTGGATGAATGTTGGTG TGATAACGTGATAAGCATCCTAGTGCTCCGGGGAAGTCCGGCAGTCTGCC ATTGTGTCTAAACAAAGAGAGTCGGCTTATCGAGCCGTTCCATAATAATA ATAACTTCGCTTTTTATGCATCCTAACGCTTAATATAAAAGACATATAAC AGTTGCGGCATATAACAGATAAACTCGAAGCCCTTTCCGCAACCATCCTC CACGATGAGATTCCAACAGCTCCTGCATGTGCGCAGATTGGCCAGCGCCG GGGCCACCACCTTGATGAGGCGGCCTATCACCACCACCACCATCACCACC ACCAGTCGCACCGCCCTGGCAGCCACCTACCCCGCTTTCGCAACCACTGT GCGCACAATGGCGGGCAGCGGGGCTCCGATCCCGGAGCTCACAGAGATCA CCGACAACGTGCAGCGCGGCAACTACGCCACTCTGACCGACAAGGATGTG GCGCATTTCGAGCAGCTCCTGGGCAAGAACTTCGTGCTCACTGAGGACCT GGAGGGATACAACATCTGCTTCCTTAAGAGGATTCGAGGCAACAGCAAGT TGGTGCTTAAGCCCGGAAGCACGGCGGAGGTGGCCGCCATCCTGAAGTAC TGCAACGAGCGTCGTTTGGCGGTGGTGCCGCAGGGCGGGAACACAGGTCT AGTGGGCGGATCCGTGCCGATCTGCGACGAGATTGTCCTTTCTCTAGCGC GCCTGAACAAGGTGTTATCCGTGGACGAGGTCACCGGCATTGCTGTCGTG GAGGCGGGCTGCATCCTGGAGAACTTCGATCAGAGGGCCAGAGAGGTGGG CTTGACGGTGCCACTGGACCTGGGCGCCAAGGCCAGTTGCCACATCGGGG GCAATGTGTCCACAAACGCGGGCGGAGTGCGGGTGGTGCGTTACGGCAAT CTGCACGGCTCTGTTTTGGGCGTGGAGGCGGTGCTGGCCACCGGTCAGGT GCTGGACCTTATGTCCAACTTCAAGAAGGACAACACCGGCTACCACATGA AGCACTTGTTCATAGGATCCGAGGGCACTCTGGGCGTGGTCACGAAGCTT TCGATGCTCTGCCCCCATTCCTCGCGAGCGGTGAACGTGGCCTTCATCGG CCTGAACTCCTTCGACGATGTGCTGAAGACTTTTGTCAGTGCCAAGCGTA ATCTGGGCGAGATTCTAAGCTCCTGCGAGCTGATTGACGAGCGGGCCTTG AACACCGCCCTCGAGCAGTTCAAGTTCCTGAACTCCCCCATTTCGGGATT TCCCTTCTACATGCTCATCGAGACCTCGGGCAGCAACGGTGACCACGACG AGGAGAAGATCAACCAGTTCATTGGGGACGGTATGGAGCGTGGCGAGATC CAGGATGGCACCGTAACCGGTGATCCCGGCAAGGTGCAGGAGATCTGGAA GATCCGCGAAATGGTGCCGCTGGGTCTGATCGAGAAGAGCTTCTGCTTCA AGTACGACATCTCGCTGCCTCTGCGGGACTTCTACAACATTGTGGACGTG ATGCGAGAGAGGTGCGGTCCCCTGGCCACAGTTGTCTGCGGATACGGCCA TCTGGGGGACTCTAATCTGCACCTGAACGTCTCCTGCGAGGAGTTTAACG GCGAGATCTACAAGCGGGTCGAACCCTTCGTCTACGAGTACACCTCCAAG CTGAAGGGCAGCATTAGTGCGGAGCACGGCATTGGCTTCCTGAAGAAGGA CTACCTGCACTACTCCAAGGACCCGGTGGCCATTGGCTACATGCGCGAGA TGAAGAAGCTGCTGGACCCCAACAGCATCCTCAATCCCTATAAGGTGCTT AACTGAAGGCTTCTACCTAATAGATTCTATTTTTTTTGTTTGTGTGTAAT TTTCATAACCTTATAATACAGAAATGGCATTAGAAAAAAAAAAAAAAAAA A
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 2037454..2038149 | 587..1282 | 3480 | 100 | Plus |
chrX | 22417052 | chrX | 2038216..2038866 | 1283..1933 | 3240 | 99.8 | Plus |
chrX | 22417052 | chrX | 2036921..2037177 | 190..446 | 1285 | 100 | Plus |
chrX | 22417052 | chrX | 2036670..2036858 | 1..189 | 945 | 100 | Plus |
chrX | 22417052 | chrX | 2037238..2037382 | 445..589 | 725 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 2143525..2144220 | 587..1282 | 3480 | 100 | Plus |
X | 23542271 | X | 2144287..2144939 | 1283..1935 | 3265 | 100 | Plus |
X | 23542271 | X | 2142992..2143248 | 190..446 | 1285 | 100 | Plus |
X | 23542271 | X | 2142741..2142929 | 1..189 | 945 | 100 | Plus |
X | 23542271 | X | 2143309..2143453 | 445..589 | 725 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 2151623..2152318 | 587..1282 | 3480 | 100 | Plus |
X | 23527363 | X | 2152385..2153037 | 1283..1935 | 3265 | 100 | Plus |
X | 23527363 | X | 2151090..2151346 | 190..446 | 1285 | 100 | Plus |
X | 23527363 | X | 2150839..2151027 | 1..189 | 945 | 100 | Plus |
X | 23527363 | X | 2151407..2151551 | 445..589 | 725 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 2036921..2037177 | 190..446 | 89 | -> | Plus |
chrX | 2037240..2037381 | 447..588 | 100 | -> | Plus |
chrX | 2036670..2036858 | 1..189 | 100 | -> | Plus |
chrX | 2037456..2038149 | 589..1282 | 100 | -> | Plus |
chrX | 2038216..2038866 | 1283..1933 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3835-RA | 1..1602 | 255..1856 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3835-RA | 1..1602 | 255..1856 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3835-RB | 1..1602 | 255..1856 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3835-RA | 1..1602 | 255..1856 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3835-RB | 1..1602 | 255..1856 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3835-RA | 10..1942 | 1..1933 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3835-RA | 10..1942 | 1..1933 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3835-RA | 55..1987 | 1..1933 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3835-RA | 10..1942 | 1..1933 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3835-RA | 55..1987 | 1..1933 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2143311..2143452 | 447..588 | 100 | -> | Plus |
X | 2142741..2142929 | 1..189 | 100 | -> | Plus |
X | 2142992..2143248 | 190..446 | 100 | -> | Plus |
X | 2143527..2144220 | 589..1282 | 100 | -> | Plus |
X | 2144287..2144937 | 1283..1933 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2143311..2143452 | 447..588 | 100 | -> | Plus |
X | 2142741..2142929 | 1..189 | 100 | -> | Plus |
X | 2142992..2143248 | 190..446 | 100 | -> | Plus |
X | 2143527..2144220 | 589..1282 | 100 | -> | Plus |
X | 2144287..2144937 | 1283..1933 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2143311..2143452 | 447..588 | 100 | -> | Plus |
X | 2142741..2142929 | 1..189 | 100 | -> | Plus |
X | 2142992..2143248 | 190..446 | 100 | -> | Plus |
X | 2143527..2144220 | 589..1282 | 100 | -> | Plus |
X | 2144287..2144937 | 1283..1933 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 2037344..2037485 | 447..588 | 100 | -> | Plus |
arm_X | 2036774..2036962 | 1..189 | 100 | -> | Plus |
arm_X | 2037025..2037281 | 190..446 | 100 | -> | Plus |
arm_X | 2037560..2038253 | 589..1282 | 100 | -> | Plus |
arm_X | 2038320..2038970 | 1283..1933 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2151409..2151550 | 447..588 | 100 | -> | Plus |
X | 2151090..2151346 | 190..446 | 100 | -> | Plus |
X | 2151625..2152318 | 589..1282 | 100 | -> | Plus |
X | 2152385..2153035 | 1283..1933 | 100 | Plus | |
X | 2150839..2151027 | 1..189 | 100 | -> | Plus |
Translation from 254 to 1855
> GH18028.pep MRFQQLLHVRRLASAGATTLMRRPITTTTITTTSRTALAATYPAFATTVR TMAGSGAPIPELTEITDNVQRGNYATLTDKDVAHFEQLLGKNFVLTEDLE GYNICFLKRIRGNSKLVLKPGSTAEVAAILKYCNERRLAVVPQGGNTGLV GGSVPICDEIVLSLARLNKVLSVDEVTGIAVVEAGCILENFDQRAREVGL TVPLDLGAKASCHIGGNVSTNAGGVRVVRYGNLHGSVLGVEAVLATGQVL DLMSNFKKDNTGYHMKHLFIGSEGTLGVVTKLSMLCPHSSRAVNVAFIGL NSFDDVLKTFVSAKRNLGEILSSCELIDERALNTALEQFKFLNSPISGFP FYMLIETSGSNGDHDEEKINQFIGDGMERGEIQDGTVTGDPGKVQEIWKI REMVPLGLIEKSFCFKYDISLPLRDFYNIVDVMRERCGPLATVVCGYGHL GDSNLHLNVSCEEFNGEIYKRVEPFVYEYTSKLKGSISAEHGIGFLKKDY LHYSKDPVAIGYMREMKKLLDPNSILNPYKVLN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21462-PA | 473 | GF21462-PA | 3..473 | 63..533 | 2410 | 95.5 | Plus |
Dana\GF12633-PA | 637 | GF12633-PA | 155..333 | 109..284 | 173 | 26.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12909-PA | 531 | GG12909-PA | 1..531 | 1..533 | 2788 | 98.7 | Plus |
Dere\GG22382-PA | 636 | GG22382-PA | 154..332 | 109..284 | 163 | 27.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24571-PA | 486 | GH24571-PA | 2..486 | 49..533 | 2322 | 87.8 | Plus |
Dgri\GH20803-PA | 627 | GH20803-PA | 149..330 | 106..284 | 168 | 26.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
D2hgdh-PA | 533 | CG3835-PA | 1..533 | 1..533 | 2748 | 100 | Plus |
D2hgdh-PC | 533 | CG3835-PC | 1..533 | 1..533 | 2748 | 100 | Plus |
D2hgdh-PB | 533 | CG3835-PB | 1..533 | 1..533 | 2748 | 100 | Plus |
ADPS-PC | 631 | CG10253-PC | 161..330 | 116..282 | 173 | 28.7 | Plus |
ADPS-PB | 631 | CG10253-PB | 161..330 | 116..282 | 173 | 28.7 | Plus |
ADPS-PD | 631 | CG10253-PD | 161..330 | 116..282 | 173 | 28.7 | Plus |
ADPS-PA | 631 | CG10253-PA | 161..330 | 116..282 | 173 | 28.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11068-PA | 530 | GI11068-PA | 1..530 | 1..533 | 2449 | 86.5 | Plus |
Dmoj\GI20890-PA | 635 | GI20890-PA | 159..330 | 116..284 | 176 | 28.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14161-PA | 513 | GL14161-PA | 1..513 | 1..533 | 2503 | 88.9 | Plus |
Dper\GL11706-PA | 596 | GL11706-PA | 123..294 | 116..284 | 177 | 28.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17719-PA | 513 | GA17719-PA | 1..513 | 1..533 | 2503 | 88.9 | Plus |
Dpse\GA24243-PA | 641 | GA24243-PA | 162..333 | 116..284 | 177 | 28.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19199-PA | 533 | GM19199-PA | 1..533 | 1..533 | 2820 | 99.2 | Plus |
Dsec\GM20165-PA | 635 | GM20165-PA | 154..332 | 109..284 | 166 | 27.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16587-PA | 533 | GD16587-PA | 1..533 | 1..533 | 2815 | 99.1 | Plus |
Dsim\GD25643-PA | 635 | GD25643-PA | 93..332 | 35..284 | 166 | 25.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16929-PA | 520 | GJ16929-PA | 1..520 | 1..533 | 2387 | 85 | Plus |
Dvir\GJ20622-PA | 642 | GJ20622-PA | 149..330 | 106..284 | 173 | 26.8 | Plus |
Translation from 254 to 1855
> GH18028.hyp MRFQQLLHVRRLASAGATTLMRRPITTTTITTTSRTALAATYPAFATTVR TMAGSGAPIPELTEITDNVQRGNYATLTDKDVAHFEQLLGKNFVLTEDLE GYNICFLKRIRGNSKLVLKPGSTAEVAAILKYCNERRLAVVPQGGNTGLV GGSVPICDEIVLSLARLNKVLSVDEVTGIAVVEAGCILENFDQRAREVGL TVPLDLGAKASCHIGGNVSTNAGGVRVVRYGNLHGSVLGVEAVLATGQVL DLMSNFKKDNTGYHMKHLFIGSEGTLGVVTKLSMLCPHSSRAVNVAFIGL NSFDDVLKTFVSAKRNLGEILSSCELIDERALNTALEQFKFLNSPISGFP FYMLIETSGSNGDHDEEKINQFIGDGMERGEIQDGTVTGDPGKVQEIWKI REMVPLGLIEKSFCFKYDISLPLRDFYNIVDVMRERCGPLATVVCGYGHL GDSNLHLNVSCEEFNGEIYKRVEPFVYEYTSKLKGSISAEHGIGFLKKDY LHYSKDPVAIGYMREMKKLLDPNSILNPYKVLN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3835-PA | 533 | CG3835-PA | 1..533 | 1..533 | 2748 | 100 | Plus |
CG3835-PC | 533 | CG3835-PC | 1..533 | 1..533 | 2748 | 100 | Plus |
CG3835-PB | 533 | CG3835-PB | 1..533 | 1..533 | 2748 | 100 | Plus |
CG10253-PC | 631 | CG10253-PC | 161..330 | 116..282 | 173 | 28.7 | Plus |
CG10253-PB | 631 | CG10253-PB | 161..330 | 116..282 | 173 | 28.7 | Plus |