BDGP Sequence Production Resources |
Search the DGRC for GH18123
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 181 |
Well: | 23 |
Vector: | pOT2 |
Associated Gene/Transcript | deltaCOP-RA |
Protein status: | GH18123.pep: gold |
Preliminary Size: | 2389 |
Sequenced Size: | 2190 |
Gene | Date | Evidence |
---|---|---|
CG14813 | 2001-01-01 | Release 2 assignment |
CG14813 | 2001-07-04 | Blastp of sequenced clone |
deltaCOP | 2008-04-29 | Release 5.5 accounting |
deltaCOP | 2008-08-15 | Release 5.9 accounting |
deltaCOP | 2008-12-18 | 5.12 accounting |
2190 bp (2190 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051528
> GH18123.complete TCACACTACCCGAACTCACACAAAGCCACGGTAAACATTTGTCGCAGAAC CGAACACGTCAGCTACGGGGATTGATTGTTAAACAACGTTTCTATCGCCC CGCAAATCCGATCCGTAGCAGCAGTCCATCCTGCGCCGTCCGCATCCGAT CCGCGAAGTATTTTCCAGGGCAAAAACGTCAAACGCAGCAGCAAAATGGT ATTAATTGCTGCGGCTGTCTGCACGAAGAATGGCAAAGTGATTCTGTCAC GTCAGTTCGTCGAGATGACGAAGGCACGCATCGAGGGACTGCTGGCTGCC TTTCCCAAGCTGATGACTGCTGGCAAGCAGCACACTTACGTGGAGACGGA CTCCGTGCGCTACGTCTACCAGCCGATGGAGAAACTATATATGCTGCTCA TCACCACTAAGGCCAGCAACATTCTGGAGGATCTGGAGACCCTGCGCCTC TTCTCGAAAGTGATTCCCGAGTACAGCCACTCGCTCGACGAGAAGGAGAT TGTGGAGAATGCCTTCAATCTGATCTTCGCATTTGACGAGATCGTGGCAC TCGGCTACAGGGAGAGCGTCAACTTGGCCCAGATCAAGACCTTCGTGGAG ATGGACTCACATGAGGAGAAGGTCTACCAGGCAGTGCGTCAGACGCAGGA GCGTGATGCGCGCCAGAAGATGCGCGAGAAGGCCAAGGAACTGCAGCGGC AGCGCATGGAGGCCAGCAAACGGGGTGGTCCCTCCCTGGGTGGCATTGGC AGCCGCAGCGGCGGCTTTAGCGCCGACGGAATTGGCAGTAGCGGCGTGAG CAGCAGTTCCGGTGCCTCCAGCGCCAACACCGGCATCACCTCCATCGATG TGGACACCAAATCCAAGGCGGCTGCCAGTAAACCAGCTTCCCGCAATGCC CTCAAGCTAGGTGGCAAGTCCAAGGACGTCGATAGTTTCGTGGATCAGCT GAAGAACGAGGGCGAGAAGATTGCCAATCTGGCACCGGCGGCGCCCGCTG GAGGTTCCAGTGCTGCAGCTAGCGCCAGTGCAGCGGCCAAGGCAGCTATC GCGTCGGACATTCACAAAGAGAGCGTACATCTGAAGATTGAGGACAAGCT AGTAGTGCGTCTGGGACGCGATGGTGGCGTGCAGCAGTTCGAGAACTCGG GCCTCCTGACGTTGCGCATTACGGACGAGGCCTACGGACGCATTTTGCTG AAGCTGTCTCCCAACCACACACAGGGCCTGCAGTTGCAGACCCACCCCAA CGTGGACAAGGAGCTGTTCAAGTCGCGCACTACCATCGGACTAAAGAACT TGGGCAAGCCGTTTCCCCTTAACACCGATGTGGGTGTGCTCAAGTGGCGC TTCGTCTCGCAGGACGAGTCGGCAGTCCCGCTGACCATTAACTGCTGGCC ATCGGATAATGGAGAGGGTGGATGCGATGTTAACATTGAGTATGAACTGG AGGCGCAGCAGCTAGAGCTGCAGGACGTGGCCATTGTCATTCCCTTGCCA ATGAATGTGCAGCCTTCGGTGGCGGAGTACGACGGCACCTACAACTACGA TTCACGCAAGCATGTGCTCCAGTGGCACATTCCAATAATCGATGCCGCCA ACAAGTCCGGTTCTATGGAGTTCAGCTGCAGTGCCTCCATTCCCGGTGAC TTCTTCCCCTTGCAGGTGTCCTTCGTCTCGAAAACGCCGTATGCGGGCGT CGTGGCCCAGGATGTGGTGCAGGTGGACAGCGAGGCGGCGGTCAAGTATT CAAGCGAGTCCATTCTGTTCGTGGAAAAGTACGAGATCGTGTAGGCCGCG CCGCTGGCCACGCCCACCTAAGTAGTACATAAATATACATAATTTCCCGG GGTCATCCGATGCGATGCAATTAATTCAACTGCTGCAGCATGTTGAGAAT TATTTTTCCATGTGCGAACTTTACATATTTATGGCGCAGACAGCTTCTCA GAGCGAGTAATTGATTCCAAAAAAAAAAAAAAAAACACCATCAAAGCCAA TTAATTAAACTAATTTTGTGCACTCCGCTGCGCTGCATATAACGGTATCA AATAAATTAATTGCAATTAGTTGTAACTGGCGATTGCAGTGTTTTGTTTT GTGTGCTTCGTCGCACCCCTTCGATTTGAGTAATTTGTATGTAGATTGCT ATGAATAAACCATATACAATATAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
deltaCOP-RA | 2268 | deltaCOP-RA | 88..2260 | 1..2173 | 10865 | 100 | Plus |
deltaCOP-RB | 2265 | deltaCOP-RB | 88..2257 | 1..2173 | 10795 | 99.8 | Plus |
deltaCOP.a | 2090 | deltaCOP.a | 39..2090 | 118..2172 | 10205 | 99.8 | Plus |
deltaCOP.a | 2090 | deltaCOP.a | 10..39 | 1..30 | 150 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 1752984..1753656 | 2172..1500 | 3365 | 100 | Minus |
chrX | 22417052 | chrX | 1754529..1754942 | 875..462 | 2070 | 100 | Minus |
chrX | 22417052 | chrX | 1753896..1754215 | 1391..1072 | 1585 | 99.7 | Minus |
chrX | 22417052 | chrX | 1754999..1755224 | 462..237 | 1130 | 100 | Minus |
chrX | 22417052 | chrX | 1755435..1755635 | 201..1 | 1005 | 100 | Minus |
chrX | 22417052 | chrX | 1754270..1754467 | 1073..876 | 990 | 100 | Minus |
chrX | 22417052 | chrX | 1753714..1753825 | 1499..1388 | 560 | 100 | Minus |
chrX | 22417052 | chrX | 1755289..1755329 | 238..198 | 205 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 1859140..1859813 | 2173..1500 | 3370 | 100 | Minus |
X | 23542271 | X | 1860686..1861099 | 875..462 | 2070 | 100 | Minus |
X | 23542271 | X | 1860053..1860372 | 1391..1072 | 1585 | 99.7 | Minus |
X | 23542271 | X | 1861156..1861381 | 462..237 | 1130 | 100 | Minus |
X | 23542271 | X | 1861592..1861792 | 201..1 | 1005 | 100 | Minus |
X | 23542271 | X | 1860427..1860624 | 1073..876 | 990 | 100 | Minus |
X | 23542271 | X | 1859871..1859982 | 1499..1388 | 560 | 100 | Minus |
X | 23542271 | X | 1861446..1861486 | 238..198 | 205 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 1867238..1867911 | 2173..1500 | 3370 | 100 | Minus |
X | 23527363 | X | 1868784..1869197 | 875..462 | 2070 | 100 | Minus |
X | 23527363 | X | 1868151..1868470 | 1391..1072 | 1585 | 99.6 | Minus |
X | 23527363 | X | 1869254..1869479 | 462..237 | 1130 | 100 | Minus |
X | 23527363 | X | 1869690..1869890 | 201..1 | 1005 | 100 | Minus |
X | 23527363 | X | 1868525..1868722 | 1073..876 | 990 | 100 | Minus |
X | 23527363 | X | 1867969..1868080 | 1499..1388 | 560 | 100 | Minus |
X | 23527363 | X | 1869544..1869584 | 238..198 | 205 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 1752984..1753656 | 1500..2172 | 100 | <- | Minus |
chrX | 1753714..1753825 | 1388..1499 | 100 | <- | Minus |
chrX | 1753900..1754213 | 1074..1387 | 100 | <- | Minus |
chrX | 1754270..1754467 | 876..1073 | 100 | <- | Minus |
chrX | 1754529..1754941 | 463..875 | 100 | <- | Minus |
chrX | 1754999..1755222 | 239..462 | 100 | <- | Minus |
chrX | 1755289..1755328 | 199..238 | 100 | <- | Minus |
chrX | 1755438..1755635 | 1..198 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
deltaCOP-RA | 1..1599 | 196..1794 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
deltaCOP-RA | 1..1599 | 196..1794 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
deltaCOP-RA | 1..1599 | 196..1794 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
deltaCOP-RA | 1..1599 | 196..1794 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
deltaCOP-RA | 1..1599 | 196..1794 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
deltaCOP-RA | 1..2170 | 1..2170 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
deltaCOP-RA | 1..2172 | 1..2172 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
deltaCOP-RA | 1..2172 | 1..2172 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
deltaCOP-RA | 1..2170 | 1..2170 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
deltaCOP-RA | 1..2170 | 3..2172 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1861446..1861485 | 199..238 | 100 | <- | Minus |
X | 1860057..1860370 | 1074..1387 | 100 | <- | Minus |
X | 1860427..1860624 | 876..1073 | 100 | <- | Minus |
X | 1861595..1861792 | 1..198 | 100 | Minus | |
X | 1860686..1861098 | 463..875 | 100 | <- | Minus |
X | 1859141..1859813 | 1500..2172 | 100 | <- | Minus |
X | 1859871..1859982 | 1388..1499 | 100 | <- | Minus |
X | 1861156..1861379 | 239..462 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1861446..1861485 | 199..238 | 100 | <- | Minus |
X | 1860057..1860370 | 1074..1387 | 100 | <- | Minus |
X | 1860427..1860624 | 876..1073 | 100 | <- | Minus |
X | 1861595..1861792 | 1..198 | 100 | Minus | |
X | 1860686..1861098 | 463..875 | 100 | <- | Minus |
X | 1859141..1859813 | 1500..2172 | 100 | <- | Minus |
X | 1859871..1859982 | 1388..1499 | 100 | <- | Minus |
X | 1861156..1861379 | 239..462 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1861446..1861485 | 199..238 | 100 | <- | Minus |
X | 1860057..1860370 | 1074..1387 | 100 | <- | Minus |
X | 1860427..1860624 | 876..1073 | 100 | <- | Minus |
X | 1861595..1861792 | 1..198 | 100 | Minus | |
X | 1860686..1861098 | 463..875 | 100 | <- | Minus |
X | 1859141..1859813 | 1500..2172 | 100 | <- | Minus |
X | 1859871..1859982 | 1388..1499 | 100 | <- | Minus |
X | 1861156..1861379 | 239..462 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 1753174..1753846 | 1500..2172 | 100 | <- | Minus |
arm_X | 1753904..1754015 | 1388..1499 | 100 | <- | Minus |
arm_X | 1754090..1754403 | 1074..1387 | 100 | <- | Minus |
arm_X | 1754460..1754657 | 876..1073 | 100 | <- | Minus |
arm_X | 1754719..1755131 | 463..875 | 100 | <- | Minus |
arm_X | 1755189..1755412 | 239..462 | 100 | <- | Minus |
arm_X | 1755479..1755518 | 199..238 | 100 | <- | Minus |
arm_X | 1755628..1755825 | 1..198 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1869693..1869890 | 1..198 | 100 | Minus | |
X | 1867239..1867911 | 1500..2172 | 100 | <- | Minus |
X | 1867969..1868080 | 1388..1499 | 100 | <- | Minus |
X | 1868155..1868468 | 1074..1387 | 100 | <- | Minus |
X | 1868525..1868722 | 876..1073 | 100 | <- | Minus |
X | 1868784..1869196 | 463..875 | 100 | <- | Minus |
X | 1869254..1869477 | 239..462 | 100 | <- | Minus |
X | 1869544..1869583 | 199..238 | 100 | <- | Minus |
Translation from 195 to 1793
> GH18123.pep MVLIAAAVCTKNGKVILSRQFVEMTKARIEGLLAAFPKLMTAGKQHTYVE TDSVRYVYQPMEKLYMLLITTKASNILEDLETLRLFSKVIPEYSHSLDEK EIVENAFNLIFAFDEIVALGYRESVNLAQIKTFVEMDSHEEKVYQAVRQT QERDARQKMREKAKELQRQRMEASKRGGPSLGGIGSRSGGFSADGIGSSG VSSSSGASSANTGITSIDVDTKSKAAASKPASRNALKLGGKSKDVDSFVD QLKNEGEKIANLAPAAPAGGSSAAASASAAAKAAIASDIHKESVHLKIED KLVVRLGRDGGVQQFENSGLLTLRITDEAYGRILLKLSPNHTQGLQLQTH PNVDKELFKSRTTIGLKNLGKPFPLNTDVGVLKWRFVSQDESAVPLTINC WPSDNGEGGCDVNIEYELEAQQLELQDVAIVIPLPMNVQPSVAEYDGTYN YDSRKHVLQWHIPIIDAANKSGSMEFSCSASIPGDFFPLQVSFVSKTPYA GVVAQDVVQVDSEAAVKYSSESILFVEKYEIV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21077-PA | 536 | GF21077-PA | 6..536 | 1..532 | 2389 | 92.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12678-PA | 532 | GG12678-PA | 1..532 | 1..532 | 2783 | 97.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17851-PA | 530 | GH17851-PA | 1..530 | 2..532 | 2245 | 82.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
deltaCOP-PA | 532 | CG14813-PA | 1..532 | 1..532 | 2671 | 100 | Plus |
deltaCOP-PB | 531 | CG14813-PB | 1..531 | 1..532 | 2655 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10991-PA | 543 | GI10991-PA | 11..543 | 1..532 | 2262 | 86 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20219-PA | 536 | GL20219-PA | 8..536 | 2..532 | 2391 | 89.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13266-PA | 532 | GA13266-PA | 4..532 | 2..532 | 2388 | 89.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18950-PA | 532 | GM18950-PA | 1..532 | 1..532 | 2790 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24626-PA | 532 | GD24626-PA | 1..532 | 1..532 | 2798 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19103-PA | 534 | GJ19103-PA | 1..534 | 1..532 | 2208 | 86.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20068-PA | 538 | GK20068-PA | 2..538 | 2..532 | 2269 | 85.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16508-PA | 532 | GE16508-PA | 1..532 | 1..532 | 2783 | 97.9 | Plus |
Translation from 195 to 1793
> GH18123.hyp MVLIAAAVCTKNGKVILSRQFVEMTKARIEGLLAAFPKLMTAGKQHTYVE TDSVRYVYQPMEKLYMLLITTKASNILEDLETLRLFSKVIPEYSHSLDEK EIVENAFNLIFAFDEIVALGYRESVNLAQIKTFVEMDSHEEKVYQAVRQT QERDARQKMREKAKELQRQRMEASKRGGPSLGGIGSRSGGFSADGIGSSG VSSSSGASSANTGITSIDVDTKSKAAASKPASRNALKLGGKSKDVDSFVD QLKNEGEKIANLAPAAPAGGSSAAASASAAAKAAIASDIHKESVHLKIED KLVVRLGRDGGVQQFENSGLLTLRITDEAYGRILLKLSPNHTQGLQLQTH PNVDKELFKSRTTIGLKNLGKPFPLNTDVGVLKWRFVSQDESAVPLTINC WPSDNGEGGCDVNIEYELEAQQLELQDVAIVIPLPMNVQPSVAEYDGTYN YDSRKHVLQWHIPIIDAANKSGSMEFSCSASIPGDFFPLQVSFVSKTPYA GVVAQDVVQVDSEAAVKYSSESILFVEKYEIV*