Clone GH18152 Report

Search the DGRC for GH18152

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:181
Well:52
Vector:pOT2
Associated Gene/TranscriptIdgf1-RA
Protein status:GH18152.pep: gold
Preliminary Size:1652
Sequenced Size:1449

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG4472 2001-01-01 Release 2 assignment
CG4472 2001-11-08 Blastp of sequenced clone
CG4472 2003-01-01 Sim4 clustering to Release 3
Idgf1 2008-04-29 Release 5.5 accounting
Idgf1 2008-08-15 Release 5.9 accounting
Idgf1 2008-12-18 5.12 accounting

Clone Sequence Records

GH18152.complete Sequence

1449 bp (1449 high quality bases) assembled on 2001-11-08

GenBank Submission: AY069157

> GH18152.complete
ATCAGCCATAAAGTCAGGACGTGGTCTCTACCAAAAGATGAGATTCCAGT
TGTTTTATATACTGGGCTTGCTCAGTGTGACAAGTTTGACCCATGCTGCC
AGCAATCTGATTTGTTATTATGACTCCAACTCGTATTTGCGCCAAGGTTT
GGCCAAAATGCATACCAACGAATTGGATTTGGCCCTGCAGTTCTGCACCC
ATTTGGTTTACGGATATGCGGGCCTGAAGTCCGGTACCCTCGAGCTATTC
AGTCTGAATGTGGACCTGGACATGTTCTACTACAAGGACATCACCGCCCT
GCGACAGAAGTTTCCTCAACTGAAGATTCTCCTCAGCGTGGGTGGAGATC
GCGATGTGGATGAGGCCCACCCCAATAAATATGTAGAGCTTCTGGAGGCG
AATCGCACGGCTCAGCAGAATTTTATAGACAGCAGCATGATTTTGCTTAA
GCGAAATGGATTCGATGGCCTTGATCTCGCGTTCCAGTTACCCCGTAATA
AGCCCAGAAAAGTCCATGGATCCCTTGGATCTTACTGGAAGTCGTTCAAG
AAGCTTTTCACTGGTGACTTCGTTGTGGACCCGCAGGCGGAGGAGCACAA
GTCACAATTCACCGATCTCGTTGGAAATATAAAGAATGCCTTTCGATCTG
CTAATCTGATGCTGTCTCTGACAGTCCTGCCCAATGTGAACTCCACTTGG
TACTTCGATGTCCCCAAACTGCATCCCCAGTTCGACTATATAAACCTGGC
GGCCTTCGACTTTCTCACCCCACTACGAAATCCCGAGGAGGCGGACTTCA
CAGCTCCGATTTTCTTCCAGGACGAACAGAATCGCTTGCCCCATTTGAAT
GTGGAGTTCCAGATTAACTATTGGCTGCAGAATCATTGTCCTGGCCAAAA
ATTGAACCTGGGAATAGCCAGTTATGGCAGAGCATGGAAATTATCGAAGG
GATCTGGACTCAGTGGTGCTCCCATTGTTCATGAGACATGTGGAGTTGCA
CCCGGCGGAATACAAATCCAGAGTGCTGAGGGCTTACTAAGTTGGCCAGA
GATTTGCTCGAAGTTGTCGCAGAACGCATCCGCTCAATATAGAGGAGAAT
TGGCGCCGCTCCGCAAGGTCACGGATCTCACCCAGAAATACGGAAATTAC
GCTCTCCGGCCAGCAGATGATAATGGAGATTTTGGCGTATGGCTGAGCTT
CGATGATCCGGATTTTGCTGGAATAAAGGCAGTATATGCCAAGGGCAAAG
GACTCGGCGGAATTGCCCTTTTCGATTTAAGTTACGATGACTTCCGTGGA
CTTTGCACTGGCCAAAAGTACCCCATACTGCGGTCAATTAAGTACTTTAT
GGGATAAATGATTTGTTTGTTAAGCCTAACAAAGCCATATATTTTAAGTT
TTCTAATAAATGTTTCATTTGAATTACAAATAAAAAAAAAAAAAAAAAA

GH18152.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:01:08
Subject Length Description Subject Range Query Range Score Percent Strand
Idgf1-RA 1572 Idgf1-RA 73..1504 1..1432 7160 100 Plus
Idgf2.a 1333 Idgf2.a 596..736 667..807 210 76.5 Plus
Idgf2-RA 1601 Idgf2-RA 819..959 667..807 210 76.5 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 08:16:08
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 16444879..16445611 699..1431 3515 98.6 Plus
chr2L 23010047 chr2L 16444121..16444819 1..699 3225 97.4 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:57:36 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 08:16:06
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 16446061..16446794 699..1432 3670 100 Plus
2L 23513712 2L 16445292..16445990 1..699 3495 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:25:57
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 16446061..16446794 699..1432 3670 100 Plus
2L 23513712 2L 16445292..16445990 1..699 3495 100 Plus
Blast to na_te.dros performed on 2019-03-16 08:16:07 has no hits.

GH18152.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 08:16:46 Download gff for GH18152.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 16444121..16444818 1..698 97 -> Plus
chr2L 16444879..16445611 699..1431 98   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:47:44 Download gff for GH18152.complete
Subject Subject Range Query Range Percent Splice Strand
Idgf1-RA 1..1320 38..1357 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:34:40 Download gff for GH18152.complete
Subject Subject Range Query Range Percent Splice Strand
Idgf1-RA 1..1320 38..1357 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 09:47:13 Download gff for GH18152.complete
Subject Subject Range Query Range Percent Splice Strand
Idgf1-RA 1..1320 38..1357 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:02:12 Download gff for GH18152.complete
Subject Subject Range Query Range Percent Splice Strand
Idgf1-RA 1..1320 38..1357 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 09:38:47 Download gff for GH18152.complete
Subject Subject Range Query Range Percent Splice Strand
Idgf1-RA 1..1320 38..1357 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:14:19 Download gff for GH18152.complete
Subject Subject Range Query Range Percent Splice Strand
Idgf1-RA 13..1443 1..1431 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:34:40 Download gff for GH18152.complete
Subject Subject Range Query Range Percent Splice Strand
Idgf1-RA 13..1443 1..1431 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:47:13 Download gff for GH18152.complete
Subject Subject Range Query Range Percent Splice Strand
Idgf1-RA 15..1445 1..1431 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:02:12 Download gff for GH18152.complete
Subject Subject Range Query Range Percent Splice Strand
Idgf1-RA 13..1443 1..1431 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:38:47 Download gff for GH18152.complete
Subject Subject Range Query Range Percent Splice Strand
Idgf1-RA 15..1445 1..1431 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 08:16:46 Download gff for GH18152.complete
Subject Subject Range Query Range Percent Splice Strand
2L 16445292..16445989 1..698 100 -> Plus
2L 16446061..16446793 699..1431 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 08:16:46 Download gff for GH18152.complete
Subject Subject Range Query Range Percent Splice Strand
2L 16445292..16445989 1..698 100 -> Plus
2L 16446061..16446793 699..1431 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 08:16:46 Download gff for GH18152.complete
Subject Subject Range Query Range Percent Splice Strand
2L 16445292..16445989 1..698 100 -> Plus
2L 16446061..16446793 699..1431 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:47:13 Download gff for GH18152.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 16445292..16445989 1..698 100 -> Plus
arm_2L 16446061..16446793 699..1431 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:39:14 Download gff for GH18152.complete
Subject Subject Range Query Range Percent Splice Strand
2L 16445292..16445989 1..698 100 -> Plus
2L 16446061..16446793 699..1431 100   Plus

GH18152.hyp Sequence

Translation from 0 to 1356

> GH18152.hyp
SAIKSGRGLYQKMRFQLFYILGLLSVTSLTHAASNLICYYDSNSYLRQGL
AKMHTNELDLALQFCTHLVYGYAGLKSGTLELFSLNVDLDMFYYKDITAL
RQKFPQLKILLSVGGDRDVDEAHPNKYVELLEANRTAQQNFIDSSMILLK
RNGFDGLDLAFQLPRNKPRKVHGSLGSYWKSFKKLFTGDFVVDPQAEEHK
SQFTDLVGNIKNAFRSANLMLSLTVLPNVNSTWYFDVPKLHPQFDYINLA
AFDFLTPLRNPEEADFTAPIFFQDEQNRLPHLNVEFQINYWLQNHCPGQK
LNLGIASYGRAWKLSKGSGLSGAPIVHETCGVAPGGIQIQSAEGLLSWPE
ICSKLSQNASAQYRGELAPLRKVTDLTQKYGNYALRPADDNGDFGVWLSF
DDPDFAGIKAVYAKGKGLGGIALFDLSYDDFRGLCTGQKYPILRSIKYFM
G*

GH18152.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 09:55:55
Subject Length Description Subject Range Query Range Score Percent Strand
Idgf1-PA 439 CG4472-PA 1..439 13..451 2326 100 Plus
Idgf2-PA 440 CG4475-PA 18..438 30..448 1338 58.5 Plus
Idgf3-PD 441 CG4559-PD 23..438 32..448 1242 54.4 Plus
Idgf3-PA 441 CG4559-PA 23..438 32..448 1242 54.4 Plus
Idgf3-PB 441 CG4559-PB 23..438 32..448 1242 54.4 Plus

GH18152.pep Sequence

Translation from 37 to 1356

> GH18152.pep
MRFQLFYILGLLSVTSLTHAASNLICYYDSNSYLRQGLAKMHTNELDLAL
QFCTHLVYGYAGLKSGTLELFSLNVDLDMFYYKDITALRQKFPQLKILLS
VGGDRDVDEAHPNKYVELLEANRTAQQNFIDSSMILLKRNGFDGLDLAFQ
LPRNKPRKVHGSLGSYWKSFKKLFTGDFVVDPQAEEHKSQFTDLVGNIKN
AFRSANLMLSLTVLPNVNSTWYFDVPKLHPQFDYINLAAFDFLTPLRNPE
EADFTAPIFFQDEQNRLPHLNVEFQINYWLQNHCPGQKLNLGIASYGRAW
KLSKGSGLSGAPIVHETCGVAPGGIQIQSAEGLLSWPEICSKLSQNASAQ
YRGELAPLRKVTDLTQKYGNYALRPADDNGDFGVWLSFDDPDFAGIKAVY
AKGKGLGGIALFDLSYDDFRGLCTGQKYPILRSIKYFMG*

GH18152.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 11:29:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13993-PA 439 GF13993-PA 13..439 13..439 1921 81.5 Plus
Dana\GF13994-PA 440 GF13994-PA 18..438 18..436 1327 56.6 Plus
Dana\GF13995-PA 441 GF13995-PA 21..438 18..436 1259 54.4 Plus
Dana\GF19161-PA 442 GF19161-PA 16..439 9..435 1208 53.7 Plus
Dana\GF11403-PA 454 GF11403-PA 32..450 23..436 1179 51.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 11:29:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22747-PA 439 GG22747-PA 1..439 1..439 2176 91.8 Plus
Dere\GG22749-PA 440 GG22749-PA 18..438 18..436 1348 59 Plus
Dere\GG22750-PA 441 GG22750-PA 23..438 20..436 1266 54.4 Plus
Dere\GG18954-PA 442 GG18954-PA 4..439 3..435 1202 53.4 Plus
Dere\GG20623-PA 452 GG20623-PA 30..448 23..436 1161 50.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 11:29:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH25189-PA 440 GH25189-PA 15..440 18..439 1795 76.3 Plus
Dgri\GH23626-PA 440 GH23626-PA 15..440 18..439 1789 75.8 Plus
Dgri\GH25190-PA 435 GH25190-PA 11..433 15..436 1362 58.7 Plus
Dgri\GH25191-PA 441 GH25191-PA 21..438 18..436 1279 54.6 Plus
Dgri\GH12912-PA 470 GH12912-PA 37..468 8..436 1266 54.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:00:48
Subject Length Description Subject Range Query Range Score Percent Strand
Idgf1-PA 439 CG4472-PA 1..439 1..439 2326 100 Plus
Idgf2-PA 440 CG4475-PA 18..438 18..436 1338 58.5 Plus
Idgf3-PD 441 CG4559-PD 23..438 20..436 1242 54.4 Plus
Idgf3-PA 441 CG4559-PA 23..438 20..436 1242 54.4 Plus
Idgf3-PB 441 CG4559-PB 23..438 20..436 1242 54.4 Plus
Idgf3-PC 441 CG4559-PC 23..438 20..436 1242 54.4 Plus
Idgf4-PC 442 CG1780-PC 4..439 3..435 1196 53.4 Plus
Idgf4-PB 442 CG1780-PB 4..439 3..435 1196 53.4 Plus
Idgf4-PA 442 CG1780-PA 4..439 3..435 1196 53.4 Plus
Idgf6-PB 452 CG5210-PB 30..448 23..436 1157 51.8 Plus
Idgf6-PA 452 CG5210-PA 30..448 23..436 1157 51.8 Plus
Idgf2-PB 368 CG4475-PB 4..366 74..436 1146 58.2 Plus
Idgf2-PC 368 CG4475-PC 4..366 74..436 1146 58.2 Plus
Idgf5-PA 444 CG5154-PA 10..442 9..436 889 42.4 Plus
Cht8-PA 476 CG9357-PA 8..396 1..434 377 27.8 Plus
Cht10-PA 2286 CG18140-PA 1910..2270 24..434 355 28.8 Plus
Cht10-PC 2286 CG18140-PC 1910..2270 24..434 355 28.8 Plus
Cht10-PB 2286 CG18140-PB 1910..2270 24..434 355 28.8 Plus
Cht10-PA 2286 CG18140-PA 967..1327 24..434 352 27.2 Plus
Cht10-PC 2286 CG18140-PC 967..1327 24..434 352 27.2 Plus
Cht10-PB 2286 CG18140-PB 967..1327 24..434 352 27.2 Plus
Cht6-PF 1367 CG43374-PF 13..404 5..438 350 27.1 Plus
Cht6-PG 1580 CG43374-PG 13..404 5..438 350 27.1 Plus
Cht6-PH 2225 CG43374-PH 13..404 5..438 350 27.1 Plus
Cht6-PI 2574 CG43374-PI 13..404 5..438 350 27.1 Plus
Cht6-PK 3703 CG43374-PK 13..404 5..438 350 27.1 Plus
Cht6-PJ 4519 CG43374-PJ 13..404 5..438 350 27.1 Plus
Cht6-PC 4611 CG43374-PC 13..404 5..438 350 27.1 Plus
Cht10-PA 2286 CG18140-PA 1411..1770 24..434 335 29.1 Plus
Cht10-PC 2286 CG18140-PC 1411..1770 24..434 335 29.1 Plus
Cht10-PB 2286 CG18140-PB 1411..1770 24..434 335 29.1 Plus
Cht9-PA 368 CG10531-PA 3..362 4..434 332 26.7 Plus
Cht4-PA 462 CG3986-PA 26..372 24..439 303 27.9 Plus
Cht7-PA 1013 CG1869-PA 116..488 15..435 281 25.3 Plus
Cht7-PA 1013 CG1869-PA 547..915 10..434 272 26.4 Plus
Cht10-PA 2286 CG18140-PA 202..587 4..439 266 24.7 Plus
Cht10-PC 2286 CG18140-PC 202..587 4..439 266 24.7 Plus
Cht10-PB 2286 CG18140-PB 202..587 4..439 266 24.7 Plus
Cht11-PA 432 CG3044-PA 49..412 6..436 219 22.5 Plus
Cht2-PB 484 CG2054-PB 43..425 24..434 214 24.6 Plus
Cht2-PC 484 CG2054-PC 43..425 24..434 214 24.6 Plus
Cht2-PA 484 CG2054-PA 43..425 24..434 214 24.6 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 11:29:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17258-PA 437 GI17258-PA 14..437 16..439 1828 77.1 Plus
Dmoj\GI17259-PA 439 GI17259-PA 4..437 6..436 1332 57.2 Plus
Dmoj\GI17260-PA 440 GI17260-PA 16..437 13..436 1264 56.1 Plus
Dmoj\GI14615-PA 444 GI14615-PA 20..442 15..436 1246 54.6 Plus
Dmoj\moj9-PA 450 GI21150-PA 1..449 1..439 1120 47.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 11:29:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL19637-PA 439 GL19637-PA 15..439 15..439 1937 83.5 Plus
Dper\GL19638-PA 439 GL19638-PA 4..437 8..436 1369 59.3 Plus
Dper\GL19639-PA 442 GL19639-PA 1..439 1..436 1209 52.5 Plus
Dper\GL16600-PA 489 GL16600-PA 55..486 5..435 1190 52.3 Plus
Dper\GL11794-PA 458 GL11794-PA 36..454 23..436 1175 51.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 11:29:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18209-PA 439 GA18209-PA 15..439 15..439 1938 83.3 Plus
Dpse\GA18210-PA 439 GA18210-PA 4..437 8..436 1369 59.3 Plus
Dpse\GA14671-PA 562 GA14671-PA 126..559 5..435 1254 54.1 Plus
Dpse\GA18257-PA 442 GA18257-PA 1..439 1..436 1210 52.7 Plus
Dpse\GA18739-PA 458 GA18739-PA 36..454 23..436 1174 51.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 11:29:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17177-PA 439 GM17177-PA 1..439 1..439 2292 96.8 Plus
Dsec\GM17178-PA 440 GM17178-PA 1..438 1..436 1336 56.5 Plus
Dsec\GM17179-PA 441 GM17179-PA 23..438 20..436 1268 53.9 Plus
Dsec\GM11340-PA 442 GM11340-PA 4..439 3..435 1195 53 Plus
Dsec\GM21717-PA 471 GM21717-PA 30..467 23..436 1112 48.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 11:29:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\Idgf1-PA 385 GD24056-PA 1..298 1..298 1563 97 Plus
Dsim\GD24057-PA 440 GD24057-PA 1..438 1..436 1337 56.5 Plus
Dsim\Idgf3-PA 441 GD24058-PA 23..438 20..436 1268 53.9 Plus
Dsim\GD11213-PA 452 GD11213-PA 30..448 23..436 1171 51.5 Plus
Dsim\GD11369-PA 443 GD11369-PA 13..441 8..436 945 43.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 11:29:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22627-PA 442 GJ22627-PA 13..442 13..439 1790 75.6 Plus
Dvir\GJ22638-PA 439 GJ22638-PA 15..437 15..436 1397 60.4 Plus
Dvir\GJ22649-PA 442 GJ22649-PA 16..439 11..436 1242 54.7 Plus
Dvir\GJ19429-PA 443 GJ19429-PA 24..441 20..436 1229 54 Plus
Dvir\GJ20997-PA 457 GJ20997-PA 35..453 23..436 1165 51.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 11:29:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK24709-PA 438 GK24709-PA 1..438 1..439 1747 71.1 Plus
Dwil\GK24710-PA 439 GK24710-PA 1..437 1..436 1336 56.8 Plus
Dwil\GK24711-PA 436 GK24711-PA 23..432 20..436 1274 56.3 Plus
Dwil\GK25565-PA 443 GK25565-PA 12..441 8..436 1212 53 Plus
Dwil\GK10659-PA 458 GK10659-PA 36..454 23..436 1179 52.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 11:29:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\Idgf1-PA 439 GE13107-PA 1..439 1..439 2236 93.8 Plus
Dyak\GE13108-PA 440 GE13108-PA 1..438 1..436 1331 56.3 Plus
Dyak\Idgf3-PA 441 GE13109-PA 23..438 20..436 1254 53.7 Plus
Dyak\GE15426-PA 442 GE15426-PA 4..439 3..435 1193 53.2 Plus
Dyak\GE11813-PA 452 GE11813-PA 30..450 23..438 1183 51.8 Plus