BDGP Sequence Production Resources |
Search the DGRC for GH18178
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 181 |
Well: | 78 |
Vector: | pOT2 |
Associated Gene/Transcript | CG16826-RA |
Protein status: | GH18178.pep: gold |
Preliminary Size: | 1026 |
Sequenced Size: | 1189 |
Gene | Date | Evidence |
---|---|---|
CG16826 | 2002-01-01 | Sim4 clustering to Release 2 |
CG16826 | 2002-06-13 | Blastp of sequenced clone |
CG16826 | 2003-01-01 | Sim4 clustering to Release 3 |
CG16826 | 2008-04-29 | Release 5.5 accounting |
CG16826 | 2008-08-15 | Release 5.9 accounting |
CG16826 | 2008-12-18 | 5.12 accounting |
1189 bp (1189 high quality bases) assembled on 2002-06-13
GenBank Submission: AY122116
> GH18178.complete CCGACGATGCATTCGACCAAGTCAGCCGTTCTCCTGCTCGCCCTGGCCAT CAGCGCCAGCTGCGTTGTTGCCACACCGCATCCGGAATTCTTGGATGAAA TCTTCGGCTCCATAAACCAAACTGGCCAGCACATCATCAGTGGATTCGTG AATGCCACCAGGAATGGCACGGCCATTGCTGGTGAGTTCCTGGACAGCAT AAGGAACTCCTCCGCCCAGTACACGCACGAAACCCTGGAGTTTGCCCAAA AAATCGCAGATGCAGTTCATAGAGCCGCCACTGAGTCAATCGTCGACTTT TCCGCGACTCTGAGGGCGCAGATCGACGCACTGCATCAGGGGATTGATCG GGTGAGAAACATCCTGCAGCGAGAGGCACTTAAGGATGCTCTCGCCAGAC TGCAGACCGTCAATACCGTCGTAAATGATCTGGAAGTGGCCGTGAATAAC CTCAATGATCGGATAGACGAGAAGAAACAAGAGTATTTCGCCATAATCCA GAAGAAGTGGTACCAATGGTCTGACGCCCAATTGGAACGAGTGGATAAGC TGACGAATGGAGTTGGCAACGAGGAAGCCGAGGAGATCATAAATGAGCTA CTCTCCCGGTATTCCGGATATCTGCACAGCTGCCTGGAGGAGTTGCAAGC GCAGCAAGCCACGTTTGAGCAAAATGTCCAAGAGGCCATCGAAAAGTACC ACAATGCCACCAACGAACTGACGGACCAAGTCGAGCTCTGCGTCCAGTTC AACCTCAGCTTCCTGTCCTGCCGCAATGGCATCAATGAGGCACTACGCGG ACTCGACTCGGCTCCCGCGGAGCTGCTCACCCTGAAGCTTCAAGGCATCC GACTACTGGCCATCGGCCTGAATGCCAGCGGATGTGTGGGCCAGACCCTG GCCGAGCACGAGCTGGAGAAGCCCAGCGTGGAGCGCAAGCTGGATGAGAT CATTGCGGAGTACCAGGAGCAGCAGACTTCCACCGATGACGACTCTAGCT CTAATAATGAAACGACCACCATAAGTTCGTAGGATTTCGGGGAGTCATCC AGTAATGAATATGACAACTCCAGCAATGACGACGAATCCTCATGGAAATA TTTACAAGAACGTATAGTGTATTTTAGGTGTCGGGTAGAAGCAGCAAAAT AAATTACTCTAATGCAACTAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG16826-RA | 1169 | CG16826-RA | 1..1169 | 1..1169 | 5845 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 13346471..13347639 | 1..1169 | 5830 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 13347791..13348962 | 1..1172 | 5860 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 13347791..13348962 | 1..1172 | 5860 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
gypsy8 | 4955 | gypsy8 GYPSY8 4955bp | 1610..1831 | 356..577 | 110 | 53.1 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 13346471..13347639 | 1..1169 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16826-RA | 1..1026 | 7..1032 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16826-RA | 1..1026 | 7..1032 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16826-RA | 1..1026 | 7..1032 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16826-RA | 1..1026 | 7..1032 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16826-RA | 1..1026 | 7..1032 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16826-RA | 1..1169 | 1..1169 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16826-RA | 1..1169 | 1..1169 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16826-RA | 1..1169 | 1..1169 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16826-RA | 1..1169 | 1..1169 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16826-RA | 19..1187 | 1..1169 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13347791..13348959 | 1..1169 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13347791..13348959 | 1..1169 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13347791..13348959 | 1..1169 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 13347791..13348959 | 1..1169 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13347791..13348959 | 1..1169 | 100 | Plus |
Translation from 0 to 1031
> GH18178.hyp PTMHSTKSAVLLLALAISASCVVATPHPEFLDEIFGSINQTGQHIISGFV NATRNGTAIAGEFLDSIRNSSAQYTHETLEFAQKIADAVHRAATESIVDF SATLRAQIDALHQGIDRVRNILQREALKDALARLQTVNTVVNDLEVAVNN LNDRIDEKKQEYFAIIQKKWYQWSDAQLERVDKLTNGVGNEEAEEIINEL LSRYSGYLHSCLEELQAQQATFEQNVQEAIEKYHNATNELTDQVELCVQF NLSFLSCRNGINEALRGLDSAPAELLTLKLQGIRLLAIGLNASGCVGQTL AEHELEKPSVERKLDEIIAEYQEQQTSTDDDSSSNNETTTISS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG16826-PB | 341 | CG16826-PB | 1..341 | 3..343 | 1709 | 100 | Plus |
CG16826-PA | 341 | CG16826-PA | 1..341 | 3..343 | 1709 | 100 | Plus |
CG33109-PA | 296 | CG33109-PA | 86..295 | 115..328 | 239 | 28 | Plus |
Translation from 6 to 1031
> GH18178.pep MHSTKSAVLLLALAISASCVVATPHPEFLDEIFGSINQTGQHIISGFVNA TRNGTAIAGEFLDSIRNSSAQYTHETLEFAQKIADAVHRAATESIVDFSA TLRAQIDALHQGIDRVRNILQREALKDALARLQTVNTVVNDLEVAVNNLN DRIDEKKQEYFAIIQKKWYQWSDAQLERVDKLTNGVGNEEAEEIINELLS RYSGYLHSCLEELQAQQATFEQNVQEAIEKYHNATNELTDQVELCVQFNL SFLSCRNGINEALRGLDSAPAELLTLKLQGIRLLAIGLNASGCVGQTLAE HELEKPSVERKLDEIIAEYQEQQTSTDDDSSSNNETTTISS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23117-PA | 345 | GF23117-PA | 1..335 | 1..335 | 838 | 49 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23840-PA | 338 | GG23840-PA | 1..334 | 1..338 | 1344 | 76 | Plus |
Dere\GG21417-PA | 297 | GG21417-PA | 68..295 | 94..325 | 218 | 28 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH25120-PA | 972 | GH25120-PA | 173..461 | 1..291 | 267 | 25.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG16826-PB | 341 | CG16826-PB | 1..341 | 1..341 | 1709 | 100 | Plus |
CG16826-PA | 341 | CG16826-PA | 1..341 | 1..341 | 1709 | 100 | Plus |
CG33109-PA | 296 | CG33109-PA | 86..295 | 113..326 | 239 | 28 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17210-PA | 759 | GI17210-PA | 27..270 | 27..274 | 236 | 26.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26181-PA | 339 | GL26181-PA | 1..339 | 1..338 | 812 | 45.2 | Plus |
Dper\GL23298-PA | 324 | GL23298-PA | 52..313 | 56..319 | 212 | 26.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14168-PA | 189 | GA14168-PA | 1..185 | 1..185 | 418 | 41.3 | Plus |
Dpse\GA27213-PA | 324 | GA27213-PA | 52..313 | 56..319 | 211 | 25.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10414-PA | 329 | GM10414-PA | 1..329 | 1..340 | 1404 | 79.7 | Plus |
Dsec\GM25871-PA | 296 | GM25871-PA | 135..295 | 164..326 | 212 | 31.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23888-PA | 331 | GD23888-PA | 1..331 | 1..340 | 1415 | 80.9 | Plus |
Dsim\GD20442-PA | 296 | GD20442-PA | 135..295 | 164..326 | 222 | 32.5 | Plus |