BDGP Sequence Production Resources |
Search the DGRC for GH18329
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 183 |
Well: | 29 |
Vector: | pOT2 |
Associated Gene/Transcript | papi-RA |
Protein status: | GH18329.pep: gold |
Preliminary Size: | 2356 |
Sequenced Size: | 2334 |
Gene | Date | Evidence |
---|---|---|
CG7082 | 2001-01-01 | Release 2 assignment |
CG7082 | 2001-09-19 | Blastp of sequenced clone |
CG7082 | 2003-01-01 | Sim4 clustering to Release 3 |
CG7082 | 2008-04-29 | Release 5.5 accounting |
CG7082 | 2008-08-15 | Release 5.9 accounting |
CG7082 | 2008-12-18 | 5.12 accounting |
2334 bp (2334 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058408
> GH18329.complete TAGAGGCGAAATCAAGTTCGGCCGCGAGAATTAAGCCATAAAATTTACGA CTTTTCGAACGAAAAACGAGACATAAAAATGTGAAAACCAAACAGCGAAT GGCTTTCAAATAAAACGCTTCATTGAGCTTAAGCGCTTTTTGCTATCTAA AAATCGAACTTTAAACAAACATAGACAAAAATTCACGATCAAGTTTTCGA AAACCTCGAAAGGCAGACTTGAAAAGGCTGCCCCAAACACCCAGCTCTAC GCAAATCCACCCACAACAAGTTAATCAACATGTTGCGCAACACGCCTTTC GGTGCCACGCCCACCTACAAACTACTTCTGGGCTTCGGACTATGCTCCCT TGGGGGCGCCATGCTATATGCCTATTTCAAGACTCGAAACGACGAGGAGG AAGCGGACTCAGGTGGCCAACGGCCGGCATCCGGGATTAGAGGACAGACA GAGGAACAGAAGCCCCAGAAGGAAGTGTGCCTCAAAATCGTCGTGGACAA CGAGCATGTGCCCCTGATAATGGGTCGCGGTGGATCCAATATCAAGTTGA TTGAAGAAAAGACCCTGGCCAAGATAAGATTACGAGACAAAGACAGTGGC CACAAATTCTGCGACATTAGCGGCGTTCCCGATGCGGTTAAGGCGGCTCG AGCTCTGCTTATCAAGGAAATTGAACGTGCGCCCGTGGTGAAAGTGGAAC TGCAGGTGCCCCAGAGGCTGGCCAGCAAAATTAACGGACGCGGCGGCGAG CTCCTCCAGGAGATCCGGAGCAGTTCGCTAGCCAAGCTGAATATCGATTT AAATGGGCGGAATGGAAAGGCCAAGATTACGATTATCGGCAATCAAAAGC AAGTGAACATAGCCCGAAAAATGCTGGATGATCAGATAGAGGAGGATGAG GAACTCGTGCGGTCCATGGAGGAGGTGGAACAGCGTCGGGAGCCCCGCAG ATCTCCCACCAACAGCATTGCGTCCAGCATGTACTCCTCCCAGACATCCC TAAGCTCTCACACTCAGCCCAGAGACAAGCTAATGGCCTCCAAGGGCGAG GGTAAGCCAATGGAGGTTTATGTCTCCGCGGTGGCCTCGCCCACTAAATT CTGGGTTCAGCTTATCGGACCGCAGTCCAAGAAGCTCGATAGCATGGTCC AGGAGATGACCAGCTATTATAGTAGTGCTGAAAACAGGGCCAAGCACGTG CTGACTGCTCCATATGTGGGTCAGATTGTGGCAGCCGTGTTTAAGTTCGA CGAGAAGTGGTATCGCGCAGAAATCGTGGACATTATGCCTAACCAGTACA ATCCAAAGGAGCAGGTGATCGATCTCTACTTCGTGGACTATGGAGATAGC GAATATATTTCGCCAGCTGATATCTGCGAGCTGCGCACTGATTTCCTCAC GCTCAGGTTCCAAGCCGTTGAATGCTTCTTGGCCAATGTAAAATCTACCA TCCAGACGGAGCCTATTACGTGGCCAAAGTCTTCAATCGCAAAGTTCGAA GAGCTGACAGAGGTGGCACATTGGAGAAAGCTGATTGCTCGAGTGGTGAC CTACAAGGAGCGTCCACGGGCAACCACCGCTGTAAGTGCTGCTGCCAAGG AGGGAACCCCGCTGCCCGGAGTGGAACTATTCGATCCAGCCGACAACTCT GAACTAAATATTGCCGATCTGATGATCACCCAGGGCTTTGCTCTGCCCCT GGACGATTCGTATCCAGTGCGGTCACGCTCCTCGACGCCCTCAAGTAACA GCGACTCCACCATTGAGGAGTTGTGCGTCAGCAATCCAGTGACTCCGCTT ACGCCCCACTCACCTATGTCGATGTCCATTGATGTTGACAGCATTACGCA GGCGGAGAACGAGCACCTCGCCCAGCAGCTGCAGCATTTGCAGCATAAAC TGAACGGAAACGACATAAAAAACATTAATCCGGCTAAACTGACGGCTACA GACCTCGAAAACGGGAATAACAATAATGCCAGCACCACAAATGGTGCTAG CGCGCATTAGGATTTCACATTGTTACTAATTATCCTCGCCTAATTGTTTA TAAGATGAAGGCTGGACGAGCAGCTCACTACTTGACGTGTACATAAAAGT ATAGCTCTTAAGGAACTTATTGTATAGGTACGAAAGAAAACTGTTTAATT TATCGCCGTGACTGATCGACATATCCTAGATCCTAAAAGCTGACGATGGA ACGGCACAGATCCTTAATTGTTTATAGCAACCTTTGCCATGTTACTTATT GTTAGCAAGAACAAGAAAAACATTTGTACATCAACAAAAAATACACAAAA AAGATCACAAACTTAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 2223434..2224258 | 584..1408 | 4125 | 100 | Plus |
chr2L | 23010047 | chr2L | 2224473..2225272 | 1513..2314 | 3930 | 99.6 | Plus |
chr2L | 23010047 | chr2L | 2222971..2223363 | 192..584 | 1935 | 99.5 | Plus |
chr2L | 23010047 | chr2L | 2221833..2222025 | 1..193 | 920 | 98.4 | Plus |
chr2L | 23010047 | chr2L | 2224307..2224415 | 1405..1513 | 545 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 2223704..2224528 | 584..1408 | 4125 | 100 | Plus |
2L | 23513712 | 2L | 2224743..2225555 | 1513..2325 | 4020 | 99.6 | Plus |
2L | 23513712 | 2L | 2223241..2223633 | 192..584 | 1965 | 100 | Plus |
2L | 23513712 | 2L | 2222106..2222298 | 1..193 | 965 | 100 | Plus |
2L | 23513712 | 2L | 2224577..2224685 | 1405..1513 | 545 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 2223704..2224528 | 584..1408 | 4125 | 100 | Plus |
2L | 23513712 | 2L | 2224743..2225555 | 1513..2325 | 4020 | 99.6 | Plus |
2L | 23513712 | 2L | 2223241..2223633 | 192..584 | 1965 | 100 | Plus |
2L | 23513712 | 2L | 2222106..2222298 | 1..193 | 965 | 100 | Plus |
2L | 23513712 | 2L | 2224577..2224685 | 1405..1513 | 545 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 2221833..2222025 | 1..193 | 98 | -> | Plus |
chr2L | 2222973..2223363 | 194..584 | 99 | -> | Plus |
chr2L | 2223435..2224256 | 585..1406 | 100 | -> | Plus |
chr2L | 2224309..2224415 | 1407..1513 | 100 | -> | Plus |
chr2L | 2224474..2225272 | 1514..2314 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7082-RB | 1..1731 | 280..2010 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7082-RB | 1..1731 | 280..2010 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
papi-RC | 1..1731 | 280..2010 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7082-RB | 1..1731 | 280..2010 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
papi-RC | 1..1731 | 280..2010 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7082-RC | 1..2314 | 1..2314 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7082-RC | 1..2314 | 1..2314 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
papi-RC | 18..2331 | 1..2314 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7082-RC | 1..2314 | 1..2314 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
papi-RC | 18..2331 | 1..2314 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2222106..2222298 | 1..193 | 100 | -> | Plus |
2L | 2223243..2223633 | 194..584 | 100 | -> | Plus |
2L | 2223705..2224526 | 585..1406 | 100 | -> | Plus |
2L | 2224579..2224685 | 1407..1513 | 100 | -> | Plus |
2L | 2224744..2225544 | 1514..2314 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2222106..2222298 | 1..193 | 100 | -> | Plus |
2L | 2223243..2223633 | 194..584 | 100 | -> | Plus |
2L | 2223705..2224526 | 585..1406 | 100 | -> | Plus |
2L | 2224579..2224685 | 1407..1513 | 100 | -> | Plus |
2L | 2224744..2225544 | 1514..2314 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2222106..2222298 | 1..193 | 100 | -> | Plus |
2L | 2223243..2223633 | 194..584 | 100 | -> | Plus |
2L | 2223705..2224526 | 585..1406 | 100 | -> | Plus |
2L | 2224579..2224685 | 1407..1513 | 100 | -> | Plus |
2L | 2224744..2225544 | 1514..2314 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 2222106..2222298 | 1..193 | 100 | -> | Plus |
arm_2L | 2223243..2223633 | 194..584 | 100 | -> | Plus |
arm_2L | 2223705..2224526 | 585..1406 | 100 | -> | Plus |
arm_2L | 2224579..2224685 | 1407..1513 | 100 | -> | Plus |
arm_2L | 2224744..2225544 | 1514..2314 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2223243..2223633 | 194..584 | 100 | -> | Plus |
2L | 2223705..2224526 | 585..1406 | 100 | -> | Plus |
2L | 2224579..2224685 | 1407..1513 | 100 | -> | Plus |
2L | 2224744..2225544 | 1514..2314 | 100 | Plus | |
2L | 2222106..2222298 | 1..193 | 100 | -> | Plus |
Translation from 279 to 2009
> GH18329.pep MLRNTPFGATPTYKLLLGFGLCSLGGAMLYAYFKTRNDEEEADSGGQRPA SGIRGQTEEQKPQKEVCLKIVVDNEHVPLIMGRGGSNIKLIEEKTLAKIR LRDKDSGHKFCDISGVPDAVKAARALLIKEIERAPVVKVELQVPQRLASK INGRGGELLQEIRSSSLAKLNIDLNGRNGKAKITIIGNQKQVNIARKMLD DQIEEDEELVRSMEEVEQRREPRRSPTNSIASSMYSSQTSLSSHTQPRDK LMASKGEGKPMEVYVSAVASPTKFWVQLIGPQSKKLDSMVQEMTSYYSSA ENRAKHVLTAPYVGQIVAAVFKFDEKWYRAEIVDIMPNQYNPKEQVIDLY FVDYGDSEYISPADICELRTDFLTLRFQAVECFLANVKSTIQTEPITWPK SSIAKFEELTEVAHWRKLIARVVTYKERPRATTAVSAAAKEGTPLPGVEL FDPADNSELNIADLMITQGFALPLDDSYPVRSRSSTPSSNSDSTIEELCV SNPVTPLTPHSPMSMSIDVDSITQAENEHLAQQLQHLQHKLNGNDIKNIN PAKLTATDLENGNNNNASTTNGASAH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14610-PA | 578 | GF14610-PA | 1..578 | 1..576 | 2555 | 83.4 | Plus |
Dana\GF20944-PA | 610 | GF20944-PA | 316..571 | 140..425 | 196 | 26.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24838-PA | 577 | GG24838-PA | 1..577 | 1..576 | 2978 | 96 | Plus |
Dere\GG18497-PA | 588 | GG18497-PA | 294..549 | 140..425 | 191 | 26.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13085-PA | 582 | GH13085-PA | 1..563 | 1..563 | 2238 | 76.1 | Plus |
Dgri\GH24358-PA | 627 | GH24358-PA | 336..558 | 144..388 | 170 | 26.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
papi-PD | 576 | CG7082-PD | 1..576 | 1..576 | 2940 | 100 | Plus |
papi-PB | 576 | CG7082-PB | 1..576 | 1..576 | 2940 | 100 | Plus |
papi-PC | 576 | CG7082-PC | 1..576 | 1..576 | 2940 | 100 | Plus |
papi-PA | 576 | CG7082-PA | 1..576 | 1..576 | 2940 | 100 | Plus |
spoon-PA | 585 | CG3249-PA | 291..546 | 140..425 | 185 | 25.8 | Plus |
spoon-PE | 585 | CG3249-PE | 291..546 | 140..425 | 185 | 25.8 | Plus |
spoon-PD | 585 | CG3249-PD | 291..546 | 140..425 | 185 | 25.8 | Plus |
spoon-PC | 607 | CG3249-PC | 313..568 | 140..425 | 185 | 25.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21571-PA | 575 | GI21571-PA | 1..574 | 1..575 | 2308 | 74.2 | Plus |
Dmoj\GI11050-PA | 681 | GI11050-PA | 389..642 | 144..425 | 206 | 28.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18709-PA | 575 | GL18709-PA | 1..575 | 1..576 | 2344 | 79.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20088-PA | 574 | GA20088-PA | 1..574 | 1..576 | 2386 | 80 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18322-PA | 576 | GM18322-PA | 1..576 | 1..576 | 3074 | 99 | Plus |
Dsec\GM12645-PA | 573 | GM12645-PA | 283..534 | 144..425 | 189 | 25.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23138-PA | 576 | GD23138-PA | 1..576 | 1..576 | 3047 | 98.3 | Plus |
Dsim\GD16260-PA | 593 | GD16260-PA | 299..554 | 140..425 | 193 | 25.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17491-PA | 579 | GJ17491-PA | 1..575 | 1..572 | 2274 | 76.7 | Plus |
Dvir\GJ14809-PA | 655 | GJ14809-PA | 364..605 | 144..411 | 191 | 27.4 | Plus |
Translation from 279 to 2009
> GH18329.hyp MLRNTPFGATPTYKLLLGFGLCSLGGAMLYAYFKTRNDEEEADSGGQRPA SGIRGQTEEQKPQKEVCLKIVVDNEHVPLIMGRGGSNIKLIEEKTLAKIR LRDKDSGHKFCDISGVPDAVKAARALLIKEIERAPVVKVELQVPQRLASK INGRGGELLQEIRSSSLAKLNIDLNGRNGKAKITIIGNQKQVNIARKMLD DQIEEDEELVRSMEEVEQRREPRRSPTNSIASSMYSSQTSLSSHTQPRDK LMASKGEGKPMEVYVSAVASPTKFWVQLIGPQSKKLDSMVQEMTSYYSSA ENRAKHVLTAPYVGQIVAAVFKFDEKWYRAEIVDIMPNQYNPKEQVIDLY FVDYGDSEYISPADICELRTDFLTLRFQAVECFLANVKSTIQTEPITWPK SSIAKFEELTEVAHWRKLIARVVTYKERPRATTAVSAAAKEGTPLPGVEL FDPADNSELNIADLMITQGFALPLDDSYPVRSRSSTPSSNSDSTIEELCV SNPVTPLTPHSPMSMSIDVDSITQAENEHLAQQLQHLQHKLNGNDIKNIN PAKLTATDLENGNNNNASTTNGASAH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
papi-PD | 576 | CG7082-PD | 1..576 | 1..576 | 2940 | 100 | Plus |
papi-PB | 576 | CG7082-PB | 1..576 | 1..576 | 2940 | 100 | Plus |
papi-PC | 576 | CG7082-PC | 1..576 | 1..576 | 2940 | 100 | Plus |
papi-PA | 576 | CG7082-PA | 1..576 | 1..576 | 2940 | 100 | Plus |
spoon-PA | 585 | CG3249-PA | 291..546 | 140..425 | 185 | 25.8 | Plus |